HHsearch alignment for GI: 254780993 and conserved domain: COG0730
>COG0730 Predicted permeases [General function prediction only].
Probab=100.00 E-value=5.6e-43 Score=248.39 Aligned_cols=241 Identities=27% Similarity=0.351 Sum_probs=211.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 79999999999999999999984021999999999998526898236689999989999999967765788752885535
Q gi|254780993|r 19 VVDYICLIIVASFLSGTLSGLFGVGGGLVMVPVLSKAFQLMGIDDSICMHVAMGTSLGVIAPTSVMSFMEHRRHGTINMK 98 (279)
Q Consensus 19 ~i~~i~~l~~~g~~~G~~~gl~G~GGG~i~vP~l~~~f~~~g~~~~~~~~~AvgTsl~~~~~ts~~~~~~~~k~~~i~~~ 98 (279)
T Consensus 3 ~~~~~~~~~~~g~~~g~i~g~~G~Ggg~i~~P~L~~~~----~~~----~~a~~t~l~~~~~~~~~~~~~~~k~~~v~~~ 74 (258)
T COG0730 3 DLMTLLLLFLVGLLAGFISGLAGGGGGLLTVPALLLLG----LPP----AAALGTSLLAVLFTSLSSALAYLKRGNVDWK 74 (258)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC----CCH----HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
T ss_conf 18999999999999999987163451999999999961----789----9999999999999999999999992686199
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCC-CCCC--CCCC---CCHHHHHHHHHHHHHHH
Q ss_conf 6665456764699999776403663102235899999999997215787-7433--3323---40133211567667666
Q gi|254780993|r 99 ILKDWIFVLPITTVVTSLMISHVDKSFLNKAFAIFCLLMGILMLKRDRL-YCER--KFPD---NYVKYIWGMVTGFLSGA 172 (279)
Q Consensus 99 ~~~~l~~~~~~Ga~lGa~l~~~i~~~~l~~~f~v~ll~~a~~~~~~~~~-~~~~--~~~~---~~~~~~~g~~~G~~sgl 172 (279)
T Consensus 75 ~~~~l~~~~~~G~~lG~~l~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~G~ 154 (258)
T COG0730 75 LALILLLGALIGAFLGALLALLLPAELLKLLFGLLLLLLALYMLLGPRLAKAEDRAARLRPLLFALALLIGFLAGFLSGL 154 (258)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999878788899999999999999999723223333221124640168999999999999983
Q ss_pred HHCCHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 521126689999998-4898446346667888666778999998538764357451001899999999999999999999
Q gi|254780993|r 173 LGVGGGIFTNLLMLF-YGASIYKATATSAGVSALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLA 251 (279)
Q Consensus 173 ~GiGGG~l~vp~l~~-~g~~~~~avgTS~~~~~~~a~~g~i~~~~~G~~~~~~~~~~~G~v~~~~~~~i~~~s~~ga~iG 251 (279)
T Consensus 155 ~G~GgG~~~vp~l~~~~~~~~~~~~~ts~~~~~~~~~~~~~~~~~~-----------~g~~~~~~~~~l~~g~~~G~~lG 223 (258)
T COG0730 155 FGVGGGFGIVPALLLLLLLPLKLAVATSLAIILNTASNGAALYLFA-----------LGAVDWPLALLLAVGSILGAYLG 223 (258)
T ss_pred CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-----------CCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 0317177899999997257337999999999999999999999998-----------47510989999999999999999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 999830899999999999999999872
Q gi|254780993|r 252 TKLSYMIGKKYLTIGFSMIMFTTSFVF 278 (279)
Q Consensus 252 a~l~~~l~~~~lk~~f~i~l~~v~~~m 278 (279)
T Consensus 224 ~~l~~~~~~~~lr~~~~~~~~~~~~~~ 250 (258)
T COG0730 224 ARLARRLSPKVLRRLFALVLLAVAIKL 250 (258)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999986799999999999999999999