HHsearch alignment for GI: 254780993 and conserved domain: pfam01810
>pfam01810 LysE LysE type translocator. This family consists of various hypothetical proteins and an l-lysine exporter LysE from Corynebacterium glutamicum which is proposed to be the first of a novel family of translocators. LysE exports l-lysine from the cell into the surrounding medium and is predicted to span the membrane six times. The physiological function of the exporter is to excrete excess l-Lysine as a result of natural flux imbalances or peptide hydrolysis; and also after artificial deregulation of l-Lysine biosynthesis as used by the biotechnology. industry for the production of l-lysine.
Probab=95.56 E-value=0.12 Score=26.44 Aligned_cols=131 Identities=13% Similarity=0.085 Sum_probs=66.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 31022358999999999972157877433332340133211567667666521126689999998489844634666788
Q gi|254780993|r 123 KSFLNKAFAIFCLLMGILMLKRDRLYCERKFPDNYVKYIWGMVTGFLSGALGVGGGIFTNLLMLFYGASIYKATATSAGV 202 (279)
Q Consensus 123 ~~~l~~~f~v~ll~~a~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~sgl~GiGGG~l~vp~l~~~g~~~~~avgTS~~~ 202 (279)
T Consensus 59 ~~~l~~~G~~yL~ylg~~~~~~~~~~~~~~~~~~~~~~~~~f~~G~~~~llNPK~~lf~~~~~~~f-i~~~~~~-~~~~~ 136 (191)
T pfam01810 59 FTVLKLGGGAYLLYLGILTLRAAWSPKSLKLSSSEASLKKSFLRGLLVSLLNPKAILFWLSVGGSF-IGKNQYG-GAQRI 136 (191)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-CCCCCCH-HHHHH
T ss_conf 999999999999999999998245654333356675488999999999800969999999999997-0776650-78999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 86667789999985387643574510018999999999999999999999998308999999999999999998729
Q gi|254780993|r 203 SALIAFPALLVRIYSGWGLNGLPPWSLGFVNIGAVLIILPISILITPLATKLSYMIGKKYLTIGFSMIMFTTSFVFA 279 (279)
Q Consensus 203 ~~~~a~~g~i~~~~~G~~~~~~~~~~~G~v~~~~~~~i~~~s~~ga~iGa~l~~~l~~~~lk~~f~i~l~~v~~~ma 279 (279)
T Consensus 137 ~~~-~~~~~~--------------------~~---~~~~~~a~~~~~~~~~~~~~~~~~~i~~~~g~~li~~gi~l~ 189 (191)
T pfam01810 137 IFA-AGLILA--------------------SL---IWFSFLAFLASRLARRFKYKKLQRIINAIAGALLIGFGVYLL 189 (191)
T ss_pred HHH-HHHHHH--------------------HH---HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999-999999--------------------99---999999999999999970867999999999999999999998