HHsearch alignment for GI: 254780995 and conserved domain: COG2374
>COG2374 Predicted extracellular nuclease [General function prediction only].
Probab=99.18 E-value=7.3e-11 Score=78.27 Aligned_cols=116 Identities=16% Similarity=0.138 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHH--HHHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHH---CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 899999999999--85116998899961477768831002787632655410000---2576768710388755433355
Q gi|254780995|r 3 SQQGEWLKKWAD--QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRF---PQEKESTCNVIKRNKSSLDYFV 77 (125)
Q Consensus 3 ~~Q~~~L~~~i~--~~~~~~~pvIi~GDFN~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~~~ 77 (125)
T Consensus 655 ~~~AqaL~~~la~~~~~~~d~~~viLGD~N~y~~edpI~-----~l~~aGy~~l~~~~~~~~~~YSY~f~G~~gtLDhaL 729 (798)
T COG2374 655 VRAAQALAAFLATNPTGKADADIVILGDFNDYAFEDPIQ-----ALEGAGYMNLAARFHDAGDRYSYVFNGQSGTLDHAL 729 (798)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHCCHHH-----HHHHCCCHHHHHHCCCCCCCEEEEECCCCCHHHHHH
T ss_conf 999999999986285655678879972432131013789-----986248301100105778734899878264076665
Q ss_pred CCCHHHHCCCCC--------CCEEEEEC-------CCCCC-CCCCCCCCCCCEEEEEECCCC
Q ss_conf 210121002573--------21154302-------47411-258678875649999961646
Q gi|254780995|r 78 IDRDNKNFLIDN--------SFSIVSYD-------QSDLD-TRRSKLSTHCPLTIEYDFEKG 123 (125)
Q Consensus 78 ~~~~~~~~~~~~--------~~~~~~~~-------~~~~~-~~~~~~SDH~PV~~~l~f~~~ 123 (125)
T Consensus 730 as~sl~~~v~~a~ewHINAdE~~~ldYn~~Fk~q~~~~~~~~~~fR~SDHDPvvvglnL~~~ 791 (798)
T COG2374 730 ASASLAAQVSGATEWHINADEPDALDYNLEFKGQNVSLYKTTNPFRASDHDPVVVGLNLLGT 791 (798)
T ss_pred HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
T ss_conf 22445521567426530456662322102103565533356775535789976999870266