HHsearch alignment for GI: 254780995 and conserved domain: pfam03372
>pfam03372 Exo_endo_phos Endonuclease/Exonuclease/phosphatase family. This large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling. This family includes: AP endonuclease proteins EC:4.2.99.18, DNase I proteins EC:3.1.21.1, Synaptojanin an inositol-1,4,5-trisphosphate phosphatase EC:3.1.3.56, Sphingomyelinase EC:3.1.4.12 and Nocturnin.
Probab=99.36 E-value=1.9e-12 Score=86.73 Aligned_cols=113 Identities=18% Similarity=-0.044 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHH-HCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCC---------CHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999985-11699889996147776883100278763265541---------0000257676871038875543
Q gi|254780995|r 4 QQGEWLKKWADQK-IKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGL---------LIRFPQEKESTCNVIKRNKSSL 73 (125)
Q Consensus 4 ~Q~~~L~~~i~~~-~~~~~pvIi~GDFN~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~~~~~~~~~~~~~~~~ 73 (125)
T Consensus 133 ~~~~~l~~~l~~~~~~~~~~~ii~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~~~~~~~~~ 212 (255)
T pfam03372 133 AQLAELLDFLSDLRIPKSDPVILCGDFNARPDSWDSALLKSIGKSTLFLLLERDLVFDGFDELPIGFPPTWWSYRNSSEK 212 (255)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHCCHHHHHCCCCCCHHHHHHEEEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999865435980899720243684220117787724546885665333722554899998787077467563
Q ss_pred CCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 335521012100257321154302474112586788756499999
Q gi|254780995|r 74 DYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118 (125)
Q Consensus 74 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~l 118 (125)
T Consensus 213 --~~~~~riD~il~s~~~~~~~~~~~~~~~~~~~~SDH~Pv~~~l 255 (255)
T pfam03372 213 --KNTGSRLDRILVSGSLLRRVVILSLLLLVIFTGSDHRPVLATL 255 (255)
T ss_pred --CCCCEEEEEEEECHHHHHHCEEEEEEECCCCCCCCCCCEEEEC
T ss_conf --7987823899968899822338987406799999974869979