HHsearch results for GI: 254780995 and protein with PDBid: 2a40_B
>2a40_B Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus} SCOP: d.151.1.1 PDB: 1dnk_A* 2a3z_B* 2a41_B* 2a42_B* 2d1k_B* 2dnj_A* 3cjc_D* 3dni_A* 1atn_D*
Probab=99.36 E-value=6.1e-13 Score=88.22 Aligned_cols=113 Identities=11% Similarity=0.080 Sum_probs=59.4
Q ss_pred HHHHHHHHHHH--HHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 99999999998--5116998899961477768831002787632655410000257676871038875543335521012
Q gi|254780995|r 5 QGEWLKKWADQ--KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDYFVIDRDN 82 (125)
Q Consensus 5 Q~~~L~~~i~~--~~~~~~pvIi~GDFN~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 82 (125)
+++++.++++. +...+.|+|+|||||..+.+...................... ...++........+||+++++.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~iv~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~iD~i~~s~~~ 220 (260)
T 2a40_B 143 EINSLYDVYLDVQQKWHLNDVMLMGDFNADCSYVTSSQWSSIRLRTSSTFQWLIP--DSADTTATSTNCAYDRIVVAGSL 220 (260)
T ss_dssp HHHHHHHHHHHHHHHHCCCCEEEEEECCCSTTTSCGGGGGGCHHHHSTTEEESSC--TTCCCBSSSCCCCCEEEEEESHH
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC--CCCCCCCCCCCCCEEEEEECHHH
T ss_conf 9999999999998636588889946666677752578898613522222112478--88853347989860499976168
Q ss_pred H-HCCCCCCCEEEEECCC--CCCCCCCCCCCCCCEEEEEE
Q ss_conf 1-0025732115430247--41125867887564999996
Q gi|254780995|r 83 K-NFLIDNSFSIVSYDQS--DLDTRRSKLSTHCPLTIEYD 119 (125)
Q Consensus 83 ~-~~~~~~~~~~~~~~~~--~~~~~~~~~SDH~PV~~~l~ 119 (125)
. ......+..+..+... .......++|||+||+++|.
T Consensus 221 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~SDH~PV~~~ls 260 (260)
T 2a40_B 221 LQSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT 260 (260)
T ss_dssp HHHHBCTTCCEECCHHHHTTCCHHHHHHHCSBCCEEEEBC
T ss_pred HCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf 3662714702675131102566345897187558899979