HHSEARCH alignment of GI: 254780995 and SCOP domain: d2a40b1

Alignment
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.46  E-value=3.3e-14  Score=93.71  Aligned_cols=113  Identities=12%  Similarity=0.027  Sum_probs=63.7

Q ss_pred             HHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             99999999999851169988999614777688310027876326554100002576768710388755433355210121
Q gi|254780995|r    4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDYFVIDRDNK   83 (125)
Q Consensus         4 ~Q~~~L~~~i~~~~~~~~pvIi~GDFN~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~   83 (125)
                      +|...+.+++.+. ..+.|+|+|||||..+.+..........+.....  .........+++.......+||+++++.+.
T Consensus       145 ~~~~~~~~~~~~~-~~~~~~iv~GDfN~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~iD~i~~s~~~~  221 (260)
T d2a40b1         145 NSLYDVYLDVQQK-WHLNDVMLMGDFNADCSYVTSSQWSSIRLRTSST--FQWLIPDSADTTATSTNCAYDRIVVAGSLL  221 (260)
T ss_dssp             HHHHHHHHHHHHH-HCCCCEEEEEECCCSTTTSCGGGGGGCHHHHSTT--EEESSCTTCCCBSSSCCCCCEEEEEESHHH
T ss_pred             HHHHHHHHHHHHH-CCCCCEEECCCCCCCCCCHHHHHHHHHCCCCCCC--CCCCCCCCCCCCCCCCCCCEEEEEECCHHH
T ss_conf             8899999999863-4578879766556786523455554414322211--112678887633479998556899684461


Q ss_pred             HCC-CCCCCEEEEECCC--CCCCCCCCCCCCCCEEEEEE
Q ss_conf             002-5732115430247--41125867887564999996
Q gi|254780995|r   84 NFL-IDNSFSIVSYDQS--DLDTRRSKLSTHCPLTIEYD  119 (125)
Q Consensus        84 ~~~-~~~~~~~~~~~~~--~~~~~~~~~SDH~PV~~~l~  119 (125)
                      ... ......+..+...  .....+..+||||||+++|.
T Consensus       222 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~SDH~PV~v~ls  260 (260)
T d2a40b1         222 QSSVVPGSAAPFDFQAAYGLSNEMALAISDHYPVEVTLT  260 (260)
T ss_dssp             HHHBCTTCCEECCHHHHTTCCHHHHHHHCSBCCEEEEBC
T ss_pred             CCEEECCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEC
T ss_conf             542632501442023212556335798077426799959


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Deoxyribonuclease I
species: Cow (Bos taurus) [TaxId: 9913]