BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780995|ref|YP_003065408.1|
Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter
asiaticus str. psy62]
(125 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780995|ref|YP_003065408.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040672|gb|ACT57468.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter
asiaticus str. psy62]
Length = 125
Score = 257 bits (656), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE
Sbjct: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
Query: 61 STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120
STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF
Sbjct: 61 STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120
Query: 121 EKGNV 125
EKGNV
Sbjct: 121 EKGNV 125
>gi|254781003|ref|YP_003065416.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040680|gb|ACT57476.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 304
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/122 (54%), Positives = 92/122 (75%), Gaps = 2/122 (1%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
+LSQQ +WLK W QK ++ +PFVIAGDFNRKIN +G+ DDFW+ +DP+ LIRFP+EK+
Sbjct: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
Query: 61 STCNVIK--RNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
S CN K RNK +DYFV+D++ FLI SFS + Y++ D+ +R +LS HCP++I+Y
Sbjct: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
Query: 119 DF 120
DF
Sbjct: 303 DF 304
>gi|315122019|ref|YP_004062508.1| hypothetical protein CKC_01345 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495421|gb|ADR52020.1| hypothetical protein CKC_01345 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 315
Score = 128 bits (322), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+ Q WL KW QK ++ IPF+IAGDFNRKIN GD D+ W K+ D +LIR P +K S
Sbjct: 192 LNLQVNWLNKWIHQKKRSNIPFIIAGDFNRKINHFGDNDELWGKISKDTILIRVPNKKRS 251
Query: 62 TCNVIK--RNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
CN K R + +D+FV+D++ +LI+NS+S VSY + D+ R +LS HCP+T +Y+
Sbjct: 252 WCNAHKSIRKREPIDFFVMDQNAYKYLIENSYSEVSYIEEDIKKRGYRLSDHCPITTDYN 311
Query: 120 FE 121
FE
Sbjct: 312 FE 313
>gi|254780797|ref|YP_003065210.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040474|gb|ACT57270.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 231
Score = 70.5 bits (171), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKIN--SIGDTDDFWQKMDPDGLLIRFPQE 58
ML+ Q WLK+W DQK +PF+IAGDFNRKIN G D+ WQK++ D L+R P +
Sbjct: 159 MLNLQATWLKQWVDQKNNLNMPFIIAGDFNRKINHSHSGIKDELWQKINQDNTLMRLPHK 218
Query: 59 K 59
K
Sbjct: 219 K 219
>gi|90412878|ref|ZP_01220878.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK]
gi|90326237|gb|EAS42664.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK]
Length = 320
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 72/131 (54%), Gaps = 21/131 (16%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMD---PDGLLIRFPQE 58
L++Q E L++W D++ +PF+I GDFNR++ D WQ++D P GL + E
Sbjct: 191 LNRQFEVLEQWVDRRAAEPLPFMILGDFNRRLTL--HNDQMWQQLDDGRPTGLSLYAATE 248
Query: 59 -KESTCNV-----------IKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRS 106
++S C + I+ + +D+ V+D K +++NSF ++ SD++ ++
Sbjct: 249 GQKSQCRIRIHSKHKKHRKIRHYPNFIDHIVLDERAKQKMVNNSFRELT---SDVEVVKA 305
Query: 107 -KLSTHCPLTI 116
LS HCP+T+
Sbjct: 306 FNLSDHCPITL 316
>gi|162147973|ref|YP_001602434.1| endonuclease/exonuclease/phosphatase family protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|209542591|ref|YP_002274820.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786550|emb|CAP56132.1| putative endonuclease/exonuclease/phosphatase family
[Gluconacetobacter diazotrophicus PAl 5]
gi|209530268|gb|ACI50205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 290
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L++Q L W Q+ G+PF++ GDFNR + D F+ +D DG L + S
Sbjct: 178 LARQMAVLDDWVAQRQDEGVPFLVMGDFNRNLTP---GDPFFHLLDQDGPLTLATAGRAS 234
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
C +D+ ++ + +L +S +++YD+ D R LS HCP+++ +
Sbjct: 235 PC---WGGTYFIDHLLLGNQARGWLRPDSLRVLTYDEQD-PARAPALSDHCPVSVRLEMP 290
>gi|262195540|ref|YP_003266749.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
14365]
gi|262078887|gb|ACY14856.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
14365]
Length = 406
Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 7/118 (5%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMD---PDGLLIRFPQE 58
LS+Q L+ W D + + G+PF + GDFNR++N+ D W+++D P + E
Sbjct: 188 LSRQLPQLEGWIDARAREGVPFAVLGDFNRRMNA---RDALWREIDDAEPAAADLTLVTE 244
Query: 59 KESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTI 116
+ + + +D+ +D +L+ NSF + Y SD R+ LS HCP+++
Sbjct: 245 GQRSRCWKGKYPRFIDHIALDLHASAWLVPNSFEQLVYSDSDTAHARA-LSDHCPISV 301
>gi|54309887|ref|YP_130907.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9]
gi|46914326|emb|CAG21105.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9]
Length = 319
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 21/135 (15%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMD---PDGLLIRFPQE 58
L++Q E L++W D++ +PF+I GDFNR++ D WQ++D P GL + E
Sbjct: 190 LNRQFEVLEQWVDRRAAEPLPFMILGDFNRRLAL--HNDKIWQQLDDGRPTGLSLYAATE 247
Query: 59 -KESTCNV-----------IKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRS 106
++S C + I+ + +D+ V+D K +I+NSF + +D++ ++
Sbjct: 248 GQKSQCRIKIHSKRKKHGQIRHYPNFIDHIVLDGRAKLKMINNSFRETT---TDVEVVKA 304
Query: 107 -KLSTHCPLTIEYDF 120
LS HCP+ + +
Sbjct: 305 FNLSDHCPIALSLNL 319
>gi|296115009|ref|ZP_06833653.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii
ATCC 23769]
gi|295978471|gb|EFG85205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii
ATCC 23769]
Length = 293
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L +Q L W ++ G PF I GDFN + +G D + +G L+ S
Sbjct: 181 LYRQVAALTDWIMERQDEGEPFAIMGDFN---HMLGPGDAMLAMLGENGPLVAPTVGLAS 237
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
C +D+ V+ + +L +S +++Y + D T +S+LS HCP++I D
Sbjct: 238 PC---WGGNYFIDHIVLGDQARQWLHPDSLRVMTYREHD-PTLQSRLSDHCPVSIGLDMP 293
>gi|254508339|ref|ZP_05120461.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16]
gi|219548753|gb|EED25756.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16]
Length = 295
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L +QGE L W ++ G ++I GDFN ++ D W+ + D +E ++
Sbjct: 179 LKRQGEALNHWIREREAHGERYMILGDFNHNMSYPKDW--LWEIVSQDSTAKLATRETKA 236
Query: 62 TCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLDTR---RSKLSTHCPLT 115
TC V RN S + +ID + + + S+ +Q + T R KLS HCP+T
Sbjct: 237 TCKVRSRNNPSKTHQFRSLID----HVITSDQISVSKIEQRNYKTDDLFRYKLSDHCPIT 292
Query: 116 I 116
+
Sbjct: 293 L 293
>gi|114798114|ref|YP_760171.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
neptunium ATCC 15444]
gi|114738288|gb|ABI76413.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
neptunium ATCC 15444]
Length = 442
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMD---PDGLLIRFPQE 58
L Q + L+ W DQ+ G ++ GDFNR++ + + D W ++ P GL I
Sbjct: 332 LFDQADVLEAWIDQRSAAGRAVIVGGDFNRRLEA--EDDPVWTGLNDGTPAGLHIAGAGT 389
Query: 59 KESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTI 116
S C+ R + +D+ ++ ++ SF +YD ++ S HCP+++
Sbjct: 390 GPS-CD--PRYREFIDFLLLSDTALTRMVAGSFRETTYDTP------ARPSDHCPISL 438
>gi|58040215|ref|YP_192179.1| hypothetical protein GOX1784 [Gluconobacter oxydans 621H]
gi|58002629|gb|AAW61523.1| Hypothetical protein GOX1784 [Gluconobacter oxydans 621H]
Length = 280
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L QQ ++ W ++ G + + GDFNR++ D Q+++ + + K S
Sbjct: 170 LYQQVRIMQDWMLERQDEGEVYAVLGDFNRRLTL---HDPLMQQIEAETPVTLTTAGKAS 226
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120
C + +D+ ++ +++L+ +S +++Y DT + LS HCP+++ +
Sbjct: 227 PC---WGGEYFIDHILLGNAARDWLVPDSLRVMTYKN---DTVPAGLSDHCPVSVRLEM 279
>gi|260770527|ref|ZP_05879460.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972]
gi|260615865|gb|EEX41051.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972]
Length = 264
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 16/125 (12%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIR---FPQE 58
L QG+ L W Q+ +VI GDFN + GD WQ M G LI ++
Sbjct: 144 LLTQGKALNAWIKQREAKQQAYVILGDFNHNLAYRGDW--LWQTMT-QGTLIEPTLASRQ 200
Query: 59 KESTCNVIKRNK-SSLDYF--VIDRDNKNFLIDNSFSIVSYDQSDLDTR---RSKLSTHC 112
+TC V R + + L F +ID + +I + + Q + +++ R LS HC
Sbjct: 201 TPATCKVRSRQQPNQLHQFRSLID----HIIISPTLKASATQQVNFESQDVLRYALSDHC 256
Query: 113 PLTIE 117
PL E
Sbjct: 257 PLRSE 261
>gi|114328405|ref|YP_745562.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis
CGDNIH1]
gi|114316579|gb|ABI62639.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis
CGDNIH1]
Length = 358
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L Q L W ++ + G+PF+I GDFNR ++ DD QKM+ L +
Sbjct: 218 LQAQTIPLTGWIAERKQEGVPFLILGDFNRWLHP---GDDVLQKMEQVAPLTLLTVNRRD 274
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQS 99
C+ S +D+ + ++++ S +++Y +
Sbjct: 275 PCH---HGASFIDHILAGGVARSWIDPESLRVMTYGPA 309
>gi|315181613|gb|ADT88526.1| Metal-dependent hydrolase [Vibrio furnissii NCTC 11218]
Length = 264
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 16/125 (12%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIR---FPQE 58
L QG+ L W Q+ +VI GDFN + GD WQ M G LI ++
Sbjct: 144 LLTQGKALNAWIKQRESKQQAYVILGDFNHNLAYRGDW--LWQTMT-QGTLIEPTLASRQ 200
Query: 59 KESTCNVIKRNK-SSLDYF--VIDRDNKNFLIDNSFSIVSYDQSDLDTR---RSKLSTHC 112
+TC V R + + L F +ID + ++ + Q + +++ R LS HC
Sbjct: 201 TPATCKVRSRQQPNQLHQFRSLID----HIIVSPTLKASDTQQVNFESQDVLRYALSDHC 256
Query: 113 PLTIE 117
PL E
Sbjct: 257 PLRSE 261
>gi|323497286|ref|ZP_08102305.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326]
gi|323317643|gb|EGA70635.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326]
Length = 232
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
+L QQGE L +W ++K +VI GDFN ++ D W + Q
Sbjct: 114 ILKQQGERLNQWINEKEVANQAYVILGDFNHNLSYPNDW--LWNTLTQSNRAQLATQRTR 171
Query: 61 STCNVIKR---NKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTR---RSKLSTHCPL 114
+ C V R NK+ +ID + ++ + + + Q ++ + +LS HCP+
Sbjct: 172 AECKVRSRKQPNKTHSFRSLID----HIIVSDQIKLSAPKQDVYPSQQVLKHQLSDHCPI 227
Query: 115 TIE 117
T +
Sbjct: 228 TAQ 230
>gi|260777714|ref|ZP_05886607.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605727|gb|EEX32012.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 296
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
+L QG+ L +W ++ + G + I GDFN ++ GD W+ + + +
Sbjct: 178 ILKSQGKVLNQWISERERQGQNYAILGDFNHNLSYNGDW--LWEVISHSSQAVLATKGTP 235
Query: 61 STCNVIKR---NKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTR---RSKLSTHCPL 114
+TC V R NK+ +ID + ++ + +Q T + LS HCP+
Sbjct: 236 ATCKVRSRKNPNKTHQFRSLID----HIIVSPGLTTAQTNQDVFPTSLVLQHHLSDHCPI 291
Query: 115 TIEYD 119
+ + +
Sbjct: 292 STQLN 296
>gi|330448573|ref|ZP_08312221.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492764|dbj|GAA06718.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 283
Score = 39.7 bits (91), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+ Q + +++W + + +PF++ GDFN +I+ D+ + + L Q
Sbjct: 159 LNLQRKIVQQWVNNQQTKQVPFIVVGDFNHRIHQPPSIDNGFISSSANKPLKWLSQNING 218
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSY--------DQSDLDTRRSKLSTHCP 113
+C + K K++ Y+ R K LID+ FS V + + + +LS HCP
Sbjct: 219 SC-LAKVTKNNRVYY---RQYKQ-LIDHGFSSVHFILNSAQQIQFAKHQVEQYQLSDHCP 273
Query: 114 L 114
L
Sbjct: 274 L 274
>gi|261251117|ref|ZP_05943691.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891]
gi|260937990|gb|EEX93978.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891]
Length = 292
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 16/124 (12%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L QG+ L KW ++ K +VI GDFN ++ GD W+ + + ++
Sbjct: 175 LKVQGQQLNKWIKEREKNNDAYVILGDFNHNLSYNGDW--LWKGISQGTDATLATKMTKA 232
Query: 62 TCNVIKRN--------KSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V RN KS +D+ ++ D L +S Y D+ R ++S HCP
Sbjct: 233 NCKVKSRNNPNKTHQFKSLIDHIIVSSD----LGFHSPKQNLYKVDDVLNR--QMSDHCP 286
Query: 114 LTIE 117
+++
Sbjct: 287 ISVS 290
>gi|163804004|ref|ZP_02197820.1| hypothetical protein 1103602000450_AND4_08521 [Vibrio sp. AND4]
gi|159172186|gb|EDP57103.1| hypothetical protein AND4_08521 [Vibrio sp. AND4]
Length = 261
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W+ + D ++ +
Sbjct: 142 IVKQQGQALAKWMKAREDNKQHYVVLGDFNHNLGYRGDW--LWRVLSDDTDAKLMTKDTQ 199
Query: 61 STCNV-IKRN-------KSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V RN +S +D+ ++ + + S V Q LD KLS HC
Sbjct: 200 AQCKVRSNRNPNKTHQFRSMIDHIIV---SGQLMASPSVQTVFKTQDVLDY---KLSDHC 253
Query: 113 PLTIEYDF 120
P++ F
Sbjct: 254 PVSSVLSF 261
>gi|71278943|ref|YP_268710.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
psychrerythraea 34H]
gi|71144683|gb|AAZ25156.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
psychrerythraea 34H]
Length = 301
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKIN---SIGDTDD--FWQKMDPDGL-LIRF 55
LS+Q L++W D +++ GDFNR+ + ++ ++D WQ ++ DG +
Sbjct: 177 LSKQISPLEQWIDLHASQDAAYIVLGDFNRRFSQDIALKYSEDKGLWQALNDDGKETLWT 236
Query: 56 PQEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLT 115
P ++ K +D+ + K I++SF + + LS HCP++
Sbjct: 237 PTMTANSGCWGGYYKEYIDHIIFSPKAKEKYIESSFEQLIFKPKYTKELSRNLSDHCPIS 296
Query: 116 IE 117
++
Sbjct: 297 VK 298
>gi|295689871|ref|YP_003593564.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
21756]
gi|295431774|gb|ADG10946.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
21756]
Length = 288
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMD----PDGLLIRFPQ 57
L +Q L++W D + G+ F + GDFNR++ D W+++D P+ L
Sbjct: 179 LMRQVPILERWIDARAAEGVRFAVLGDFNRRLARADDV--VWREIDDADPPNADLSLAEG 236
Query: 58 EKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPL 114
C+ R +D+ V+D L F ++Y + + S HCP+
Sbjct: 237 SAGPKCD--PRYSEFIDHIVLDARAARDL--EGFEELTYAAGE------RGSDHCPV 283
>gi|262274141|ref|ZP_06051953.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886]
gi|262221951|gb|EEY73264.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886]
Length = 252
Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 20/131 (15%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDF-WQKMDPDGL---LIRFPQ 57
L Q E L W + ++K G F+IAGDFN +N D +++ W+++ D L++ +
Sbjct: 126 LDHQIEALSVWINARLKLGQDFIIAGDFNHYLN---DKNEWVWKQLLLDVGEDNLVKLTK 182
Query: 58 EKESTCNVIKRNKSS-----------LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRS 106
+ C K N + +D+ + + + L Y + T R
Sbjct: 183 GTPAKCKARKYNYRTKRWEHVVYQKLIDHIIASKGAVSALNPPQARQYQYSYHAVATYR- 241
Query: 107 KLSTHCPLTIE 117
LS HCP+ ++
Sbjct: 242 -LSDHCPIVVD 251
>gi|149190193|ref|ZP_01868468.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1]
gi|148835940|gb|EDL52902.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1]
Length = 301
Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 21/130 (16%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGL--LIRF-PQE 58
L +QG+ + W Q + +++ GDFN + GD W+ + +GL R Q+
Sbjct: 181 LKKQGKVINSWLKQVEQQNELYIVLGDFNHNLAYSGDW--LWKTIT-NGLDTAPRLTSQQ 237
Query: 59 KESTCNV--------IKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLST 110
++TC V I + +S +D+ ++ + + S V D + ++S
Sbjct: 238 TKATCKVKSRKNNDKIHQFRSLIDHIIVSPELRTSPAVQSLMPVE------DVLKHQMSD 291
Query: 111 HCPLTIE-YD 119
HCPL+IE YD
Sbjct: 292 HCPLSIELYD 301
>gi|269959773|ref|ZP_06174152.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835527|gb|EEZ89607.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 287
Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 16/128 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W+ + + + +
Sbjct: 168 IVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRGDW--LWEVLSDNTDAKLVTKNTK 225
Query: 61 STCNV-IKRN-------KSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V RN +S +D+ ++ D K + V Q LD KLS HC
Sbjct: 226 AECKVRSNRNPNKTHQFRSVIDHIIVSGDLK---ASSGVQTVFKTQDVLDY---KLSDHC 279
Query: 113 PLTIEYDF 120
P++ F
Sbjct: 280 PVSTTLSF 287
>gi|328470709|gb|EGF41620.1| hypothetical protein VP10329_07912 [Vibrio parahaemolyticus 10329]
Length = 293
Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
LSQQGE L KW ++ K + + GDFN ++ D W M ++ ++
Sbjct: 174 LSQQGEALAKWVSEREKKKEQYAVMGDFNHNLSY--QRDWLWAIMTLGNDAQLVTRDTQA 231
Query: 62 TCNV--------IKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V + +S +D+ ++ K N+ + Q LD KLS HCP
Sbjct: 232 DCKVRSNKNPSKTHQFRSLIDHIIVSPQIK---AKNAHQTLFSSQDVLDY---KLSDHCP 285
Query: 114 L 114
+
Sbjct: 286 V 286
>gi|153836873|ref|ZP_01989540.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810]
gi|149749831|gb|EDM60576.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810]
Length = 288
Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
LSQQGE L KW ++ K + + GDFN ++ D W M ++ ++
Sbjct: 169 LSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSY--QRDWLWAIMTLGNDAQLVTRDTQA 226
Query: 62 TCNV--------IKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V + +S +D+ ++ K N+ + Q LD KLS HCP
Sbjct: 227 DCKVRSNKNPSKTHQFRSLIDHIIVSPQIK---AKNAHQTLFISQDVLDY---KLSDHCP 280
Query: 114 L 114
+
Sbjct: 281 V 281
>gi|156976926|ref|YP_001447832.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116]
gi|156528520|gb|ABU73605.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116]
Length = 287
Score = 37.0 bits (84), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 16/128 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W+ + + + +
Sbjct: 168 IVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRGDW--LWEVLSDNTDAKLVTKNTK 225
Query: 61 STCNV-IKRN-------KSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V RN +S +D+ ++ D K + V Q LD KLS HC
Sbjct: 226 AECKVRSNRNPKKTHQFRSVIDHIIVSGDLK---ASSGVQTVFKTQDVLDY---KLSDHC 279
Query: 113 PLTIEYDF 120
P++ F
Sbjct: 280 PVSTTLTF 287
>gi|260365700|ref|ZP_05778214.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030]
gi|260896112|ref|ZP_05904608.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466]
gi|308094717|ref|ZP_05891469.2| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034]
gi|308126490|ref|ZP_05910491.2| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037]
gi|308088090|gb|EFO37785.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466]
gi|308090251|gb|EFO39946.1| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034]
gi|308109923|gb|EFO47463.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037]
gi|308111792|gb|EFO49332.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030]
Length = 288
Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
LSQQGE L KW ++ K + + GDFN ++ D W M ++ ++
Sbjct: 169 LSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSY--QRDWLWAIMTLGNDAQLVTRDTQA 226
Query: 62 TCNV--------IKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V + +S +D+ ++ K N+ + Q LD KLS HCP
Sbjct: 227 DCKVRSNKNPSKTHQFRSLIDHIIVSPQIK---AKNAHQTLFSSQDVLDY---KLSDHCP 280
Query: 114 L 114
+
Sbjct: 281 V 281
>gi|28900797|ref|NP_800452.1| hypothetical protein VPA0942 [Vibrio parahaemolyticus RIMD 2210633]
gi|28809243|dbj|BAC62285.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 293
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
LSQQGE L KW ++ K + + GDFN ++ D W M ++ ++
Sbjct: 174 LSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSY--QRDWLWAIMTLGNDAQLVTRDTQA 231
Query: 62 TCNV--------IKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V + +S +D+ ++ K N+ + Q LD KLS HCP
Sbjct: 232 DCKVRSNKNPSKTHQFRSLIDHIIVSPQIK---AKNAHQTLFSSQDVLDY---KLSDHCP 285
Query: 114 L 114
+
Sbjct: 286 V 286
>gi|90578074|ref|ZP_01233885.1| hypothetical protein VAS14_13524 [Vibrio angustum S14]
gi|90441160|gb|EAS66340.1| hypothetical protein VAS14_13524 [Vibrio angustum S14]
Length = 287
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 15/129 (11%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKI--NSIGDTDDFWQKMDPDGLLIRFPQEK 59
L+ Q L++W Q+ PF++ GDFN I + + +F+ + G L
Sbjct: 158 LNFQRTLLQQWIKQQQINKQPFILVGDFNHHIAFKTTNNATNFFSSNNKQGPLKWLTNNV 217
Query: 60 ESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFS-----IVSYDQ---SDLDTRRSKLSTH 111
+ C + K+ K+ Y+ ++ LID+ FS I S Q S +LS H
Sbjct: 218 KGNC-LTKKIKNKKVYYRHYKE----LIDHGFSSEHFNITSVQQLPYSKEQVSTYQLSDH 272
Query: 112 CPLTIEYDF 120
CP+ F
Sbjct: 273 CPVIFSLSF 281
>gi|269967746|ref|ZP_06181794.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B]
gi|269827652|gb|EEZ81938.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B]
Length = 287
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 16/128 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W + + ++ +
Sbjct: 168 IVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQGDW--LWDVISDNTSAKLVTKDTK 225
Query: 61 STCNV-IKRN-------KSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V RN +S +D+ ++ D K + V Q LD KLS HC
Sbjct: 226 AECKVRSNRNPNKTHQFRSVIDHIIVSGDLK---ASSGVQTVFKTQDVLDY---KLSDHC 279
Query: 113 PLTIEYDF 120
P++ F
Sbjct: 280 PVSTTLTF 287
>gi|323491827|ref|ZP_08097002.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546]
gi|323313962|gb|EGA67051.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546]
Length = 296
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
+L QQG L W Q+ ++I GDFN + D W ++ D + +
Sbjct: 178 ILKQQGRALNGWIKQREAAKDAYIILGDFNHNMGY--QRDWLWDEIAQDTQATLVSKSTK 235
Query: 61 STCNVIKRN---KSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDL----DTRRSKLSTHCP 113
+ C V RN K+ +ID + ++ S + S + D+ D +LS HCP
Sbjct: 236 AECKVRSRNNPRKTHQFRSLID----HIIVSESLT-ASKPKQDVYPVEDVLNHQLSDHCP 290
Query: 114 LT 115
L+
Sbjct: 291 LS 292
>gi|262395406|ref|YP_003287259.1| metal-dependent hydrolase [Vibrio sp. Ex25]
gi|262339000|gb|ACY52794.1| metal-dependent hydrolase [Vibrio sp. Ex25]
Length = 288
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
LSQQGE L KW ++ K + + GDFN ++ D W M ++ ++
Sbjct: 169 LSQQGEALAKWMSEREKKKQQYAVMGDFNHNLSY--QRDWLWAIMTLGNDAQLVTRDTKA 226
Query: 62 TCNV--------IKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V + +S +D+ ++ K N+ + Q LD KLS HCP
Sbjct: 227 DCKVRSNKNPRKTHQFRSLIDHIIVSPQIK---AKNAHQTLFSSQDVLDY---KLSDHCP 280
Query: 114 L 114
+
Sbjct: 281 V 281
>gi|153832821|ref|ZP_01985488.1| metal-dependent hydrolase [Vibrio harveyi HY01]
gi|148870955|gb|EDL69845.1| metal-dependent hydrolase [Vibrio harveyi HY01]
Length = 287
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 16/128 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W + + + +
Sbjct: 168 IVKQQGQALAKWIKARENNKQQYVVLGDFNHNLGYRGDW--LWDVLSDNTDAKLVTKNTK 225
Query: 61 STCNV-IKRN-------KSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V RN +S +D+ ++ D K + V Q LD KLS HC
Sbjct: 226 AECKVRSNRNPKKTHQFRSVIDHIIVSGDLK---ASSGVQTVFKTQDVLDY---KLSDHC 279
Query: 113 PLTIEYDF 120
P++ F
Sbjct: 280 PVSTTLTF 287
>gi|114771793|ref|ZP_01449186.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255]
gi|114547609|gb|EAU50500.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255]
Length = 260
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 29/139 (20%)
Query: 7 EWLKKWADQK---IKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+W+K+ ++ IK PF++AGDF N I +D W + P+ + +
Sbjct: 126 KWMKRLYERTCALIKLEEPFLLAGDF----NIIPQAEDCWDTKVWESDAAYLPESRAAYR 181
Query: 64 NVIK---------RNKSSLDYFVIDRD----NKN-------FLIDNSFSIVSYD-QSDLD 102
++ +NKS+++Y D NKN FL+ +S + + D QSD +
Sbjct: 182 KILNLGLTDAFRVKNKSAMNYTFWDYQAGAWNKNNGIRIDHFLLSSSCADILIDCQSDRE 241
Query: 103 TR-RSKLSTHCPLTIEYDF 120
R R K S H P+ +E D
Sbjct: 242 CRARDKPSDHVPVWVELDI 260
>gi|91224719|ref|ZP_01259980.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01]
gi|91190607|gb|EAS76875.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01]
Length = 287
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 16/128 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W + + ++ +
Sbjct: 168 IVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQGDW--LWDVISDNTSAKLVTKDTK 225
Query: 61 STCNV-IKRN-------KSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V RN +S +D+ + D K + V Q LD KLS HC
Sbjct: 226 AECKVRSNRNPNKTHQFRSVIDHIIASGDLK---ASSGVQTVFKTQDVLDY---KLSDHC 279
Query: 113 PLTIEYDF 120
P++ F
Sbjct: 280 PVSTTLTF 287
>gi|291303869|ref|YP_003515147.1| hypothetical protein Snas_6438 [Stackebrandtia nassauensis DSM
44728]
gi|290573089|gb|ADD46054.1| hypothetical protein Snas_6438 [Stackebrandtia nassauensis DSM
44728]
Length = 680
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 9 LKKWADQKIKTGIPF-VIAGDFNRKINSIGDTDDFWQKMDPD---GLLIRFPQEKESTCN 64
L K AD +K G AGD N GD DFW +D D LL FP +
Sbjct: 15 LTKAADTAVKVGKDMESRAGDVNDVAKRGGDGSDFWAGVDADAQNALLTTFPPPLNAAGT 74
Query: 65 VIKRNKSSLDYFVIDRDNKNFLIDNSFS 92
V K + ++D V + D ID + S
Sbjct: 75 VFKSSAGTVDKLVDELDAAKNEIDTAIS 102
>gi|88860700|ref|ZP_01135337.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2]
gi|88817295|gb|EAR27113.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2]
Length = 316
Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKI 33
++Q WL KW ++K + P+++ GDFN ++
Sbjct: 202 FAKQAVWLDKWFERKEASKQPYIVMGDFNHRL 233
>gi|84393951|ref|ZP_00992692.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01]
gi|84375450|gb|EAP92356.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01]
Length = 292
Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L Q + L KW Q+ + G + I GDFN ++ D W+ M + ++ +
Sbjct: 174 LKDQAKQLNKWIQQRERKGEDYAILGDFNHNLSYSRDW--MWKDMTQNTDAQLVTRKTRA 231
Query: 62 TCNV-IKRNKSSLDYF--VIDRDNKNFLIDNSFSIVSYDQSDLDTRRS---KLSTHCPLT 115
C V RN F VID + ++ S Q +T+ KLS HCP++
Sbjct: 232 DCKVRSNRNNHRTHQFRSVID----HIVVSKSLDASPAKQKVFETQDVLDYKLSDHCPVS 287
>gi|218676474|ref|YP_002395293.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus
LGP32]
gi|218324742|emb|CAV26393.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus
LGP32]
Length = 291
Score = 33.9 bits (76), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L Q + L KW Q+ + G + I GDFN ++ D W+ + + ++ +
Sbjct: 174 LKDQAQQLNKWIQQRERQGQDYAILGDFNHNLSY--SRDWMWKDLTQNADAQLATRKTRA 231
Query: 62 TCNV-IKRNKSSLDYF--VIDRDNKNFLIDNSFSIVSYDQSDLDTRRS---KLSTHCPLT 115
C V RN F VID + ++ S Q +T+ KLS HCP++
Sbjct: 232 DCKVRSNRNNHRTHQFRSVID----HIVVSKSLDASPAKQKVFETQDVLDYKLSDHCPVS 287
>gi|254525870|ref|ZP_05137922.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9202]
gi|221537294|gb|EEE39747.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9202]
Length = 663
Score = 33.5 bits (75), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 31 RKINSIGDTDDFWQKMDPDGLLIR--------FPQEKES-TCNVIKRNKSSLDYFVIDR- 80
RK NSI +DDF ++P L+ R F ++ ES T + +KRN S DYF +
Sbjct: 312 RKFNSIDISDDFVINLEPQFLIQRSLQGYTKSFVKKNESITSDRVKRNSSFEDYFALKSK 371
Query: 81 -----DNKNFLIDNSFSIVSYDQ-SDLDTRRSKLSTHC 112
N +F ID + + + +D+ SD ++KLS
Sbjct: 372 IKGTIKNWDFEIDKNLNSLDFDKFSDAFRLKTKLSKEL 409
Searching..................................................done
Results from round 2
>gi|254780995|ref|YP_003065408.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040672|gb|ACT57468.1| Endonuclease/exonuclease/phosphatase [Candidatus Liberibacter
asiaticus str. psy62]
Length = 125
Score = 177 bits (449), Expect = 4e-43, Method: Composition-based stats.
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE
Sbjct: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
Query: 61 STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120
STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF
Sbjct: 61 STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120
Query: 121 EKGNV 125
EKGNV
Sbjct: 121 EKGNV 125
>gi|315122019|ref|YP_004062508.1| hypothetical protein CKC_01345 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495421|gb|ADR52020.1| hypothetical protein CKC_01345 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 315
Score = 172 bits (435), Expect = 2e-41, Method: Composition-based stats.
Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+ Q WL KW QK ++ IPF+IAGDFNRKIN GD D+ W K+ D +LIR P +K S
Sbjct: 192 LNLQVNWLNKWIHQKKRSNIPFIIAGDFNRKINHFGDNDELWGKISKDTILIRVPNKKRS 251
Query: 62 TCNVIK--RNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
CN K R + +D+FV+D++ +LI+NS+S VSY + D+ R +LS HCP+T +Y+
Sbjct: 252 WCNAHKSIRKREPIDFFVMDQNAYKYLIENSYSEVSYIEEDIKKRGYRLSDHCPITTDYN 311
Query: 120 FE 121
FE
Sbjct: 312 FE 313
>gi|254781003|ref|YP_003065416.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040680|gb|ACT57476.1| hypothetical protein CLIBASIA_04520 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 304
Score = 169 bits (429), Expect = 8e-41, Method: Composition-based stats.
Identities = 67/122 (54%), Positives = 92/122 (75%), Gaps = 2/122 (1%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
+LSQQ +WLK W QK ++ +PFVIAGDFNRKIN +G+ DDFW+ +DP+ LIRFP+EK+
Sbjct: 183 LLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIRFPKEKD 242
Query: 61 STCNVIK--RNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
S CN K RNK +DYFV+D++ FLI SFS + Y++ D+ +R +LS HCP++I+Y
Sbjct: 243 SRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDY 302
Query: 119 DF 120
DF
Sbjct: 303 DF 304
>gi|162147973|ref|YP_001602434.1| endonuclease/exonuclease/phosphatase family protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|209542591|ref|YP_002274820.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786550|emb|CAP56132.1| putative endonuclease/exonuclease/phosphatase family
[Gluconacetobacter diazotrophicus PAl 5]
gi|209530268|gb|ACI50205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 290
Score = 154 bits (390), Expect = 3e-36, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 7/120 (5%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L++Q L W Q+ G+PF++ GDFNR + D F+ +D DG L + S
Sbjct: 178 LARQMAVLDDWVAQRQDEGVPFLVMGDFNRNLT---PGDPFFHLLDQDGPLTLATAGRAS 234
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
C +D+ ++ + +L +S +++YD+ D R LS HCP+++ +
Sbjct: 235 PC---WGGTYFIDHLLLGNQARGWLRPDSLRVLTYDEQD-PARAPALSDHCPVSVRLEMP 290
>gi|296115009|ref|ZP_06833653.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii
ATCC 23769]
gi|295978471|gb|EFG85205.1| Endonuclease/exonuclease/phosphatase [Gluconacetobacter hansenii
ATCC 23769]
Length = 293
Score = 154 bits (388), Expect = 6e-36, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 7/120 (5%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L +Q L W ++ G PF I GDFN +G D + +G L+ S
Sbjct: 181 LYRQVAALTDWIMERQDEGEPFAIMGDFNH---MLGPGDAMLAMLGENGPLVAPTVGLAS 237
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
C +D+ V+ + +L +S +++Y + D T +S+LS HCP++I D
Sbjct: 238 PC---WGGNYFIDHIVLGDQARQWLHPDSLRVMTYREHD-PTLQSRLSDHCPVSIGLDMP 293
>gi|262195540|ref|YP_003266749.1| endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
14365]
gi|262078887|gb|ACY14856.1| Endonuclease/exonuclease/phosphatase [Haliangium ochraceum DSM
14365]
Length = 406
Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMD---PDGLLIRFPQE 58
LS+Q L+ W D + + G+PF + GDFNR++N+ D W+++D P + E
Sbjct: 188 LSRQLPQLEGWIDARAREGVPFAVLGDFNRRMNA---RDALWREIDDAEPAAADLTLVTE 244
Query: 59 KESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
+ + + +D+ +D +L+ NSF + Y SD R+ LS HCP+++
Sbjct: 245 GQRSRCWKGKYPRFIDHIALDLHASAWLVPNSFEQLVYSDSDTAHARA-LSDHCPISVRL 303
Query: 119 DFEKG 123
KG
Sbjct: 304 R-PKG 307
>gi|90412878|ref|ZP_01220878.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK]
gi|90326237|gb|EAS42664.1| hypothetical protein P3TCK_26405 [Photobacterium profundum 3TCK]
Length = 320
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 21/135 (15%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMD---PDGLLIRFPQE 58
L++Q E L++W D++ +PF+I GDFNR++ D WQ++D P GL + E
Sbjct: 191 LNRQFEVLEQWVDRRAAEPLPFMILGDFNRRLTL--HNDQMWQQLDDGRPTGLSLYAATE 248
Query: 59 -KESTCNVI-----------KRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRS 106
++S C + + + +D+ V+D K +++NSF ++ SD++ ++
Sbjct: 249 GQKSQCRIRIHSKHKKHRKIRHYPNFIDHIVLDERAKQKMVNNSFRELT---SDVEVVKA 305
Query: 107 -KLSTHCPLTIEYDF 120
LS HCP+T+
Sbjct: 306 FNLSDHCPITLSLSL 320
>gi|54309887|ref|YP_130907.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9]
gi|46914326|emb|CAG21105.1| hypothetical protein PBPRA2733 [Photobacterium profundum SS9]
Length = 319
Score = 129 bits (323), Expect = 2e-28, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 71/135 (52%), Gaps = 21/135 (15%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMD---PDGLLIRFPQE 58
L++Q E L++W D++ +PF+I GDFNR++ D WQ++D P GL + E
Sbjct: 190 LNRQFEVLEQWVDRRAAEPLPFMILGDFNRRLAL--HNDKIWQQLDDGRPTGLSLYAATE 247
Query: 59 -KESTCNV-----------IKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRS 106
++S C + I+ + +D+ V+D K +I+NSF + +D++ ++
Sbjct: 248 GQKSQCRIKIHSKRKKHGQIRHYPNFIDHIVLDGRAKLKMINNSFRETT---TDVEVVKA 304
Query: 107 -KLSTHCPLTIEYDF 120
LS HCP+ + +
Sbjct: 305 FNLSDHCPIALSLNL 319
>gi|254508339|ref|ZP_05120461.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16]
gi|219548753|gb|EED25756.1| metal-dependent hydrolase [Vibrio parahaemolyticus 16]
Length = 295
Score = 124 bits (310), Expect = 6e-27, Method: Composition-based stats.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 12/121 (9%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L +QGE L W ++ G ++I GDFN ++ D W+ + D +E ++
Sbjct: 179 LKRQGEALNHWIREREAHGERYMILGDFNHNMSYPKDW--LWEIVSQDSTAKLATRETKA 236
Query: 62 TCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLDTR---RSKLSTHCPLT 115
TC V RN S + +ID + + + S+ +Q + T R KLS HCP+T
Sbjct: 237 TCKVRSRNNPSKTHQFRSLID----HVITSDQISVSKIEQRNYKTDDLFRYKLSDHCPIT 292
Query: 116 I 116
+
Sbjct: 293 L 293
>gi|58040215|ref|YP_192179.1| hypothetical protein GOX1784 [Gluconobacter oxydans 621H]
gi|58002629|gb|AAW61523.1| Hypothetical protein GOX1784 [Gluconobacter oxydans 621H]
Length = 280
Score = 121 bits (303), Expect = 3e-26, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L QQ ++ W ++ G + + GDFNR++ D Q+++ + + K S
Sbjct: 170 LYQQVRIMQDWMLERQDEGEVYAVLGDFNRRLTL---HDPLMQQIEAETPVTLTTAGKAS 226
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
C + +D+ ++ +++L+ +S +++Y + + LS HCP+++ +
Sbjct: 227 PC---WGGEYFIDHILLGNAARDWLVPDSLRVMTYKNDTVP---AGLSDHCPVSVRLEMP 280
>gi|330993334|ref|ZP_08317269.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1]
gi|329759364|gb|EGG75873.1| endonuclease/exonuclease/phosphatase [Gluconacetobacter sp. SXCC-1]
Length = 283
Score = 114 bits (284), Expect = 6e-24, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 7/120 (5%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L +Q + W ++ G F + GDFNR + D + + G L + S
Sbjct: 171 LLRQIAIVADWILERQDEGEAFAVLGDFNR---LLAPDDPAFHTLAASGPLALVTAGRAS 227
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
C + +D+ ++ + +S ++ Y + D T S+LS HCP+++
Sbjct: 228 PC---AQGSYFIDHILVGGPAYARVRPDSLRVMLYHE-DSGTEASRLSDHCPVSVNLSLP 283
>gi|258541736|ref|YP_003187169.1| hypothetical protein APA01_06400 [Acetobacter pasteurianus IFO
3283-01]
gi|256632814|dbj|BAH98789.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256635871|dbj|BAI01840.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256638926|dbj|BAI04888.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256641980|dbj|BAI07935.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256645035|dbj|BAI10983.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256648090|dbj|BAI14031.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256651143|dbj|BAI17077.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654134|dbj|BAI20061.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 321
Score = 104 bits (258), Expect = 5e-21, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 10/123 (8%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L QQ L W + + F I GDFNR + D + + L S
Sbjct: 204 LWQQFAALDDWVATRTQHHEAFAIMGDFNR---HLTVHDPLFLTLLRIAPLDLATAGMAS 260
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
C +D+ ++ + + + NS ++ + LS HCP++I
Sbjct: 261 PCQ---GGSYFIDHIILGGAARAWKVPNSLRVIPLAEE----TGQNLSDHCPVSISLRLP 313
Query: 122 KGN 124
N
Sbjct: 314 STN 316
>gi|329115285|ref|ZP_08244040.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001]
gi|326695728|gb|EGE47414.1| Hypothetical protein APO_2103 [Acetobacter pomorum DM001]
Length = 139
Score = 98.6 bits (244), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 41/120 (34%), Gaps = 10/120 (8%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L QQ L W + + F I GDFNR + D + + L S
Sbjct: 22 LWQQFAVLDAWVAIRTQHHEAFAIMGDFNR---HLTVHDPLFLTLLRIAPLDLVTAGTAS 78
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
C +D+ ++ + + I NS + + LS HCP++I
Sbjct: 79 PCQ---NGSYFIDHIILGGAARAWKIPNSLRVTPLAEE----VGQTLSDHCPVSITLQLP 131
>gi|114328405|ref|YP_745562.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis
CGDNIH1]
gi|114316579|gb|ABI62639.1| hypothetical protein GbCGDNIH1_1741 [Granulibacter bethesdensis
CGDNIH1]
Length = 358
Score = 97.5 bits (241), Expect = 6e-19, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 30/141 (21%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L Q L W ++ + G+PF+I GDFNR ++ DD QKM+ L +
Sbjct: 218 LQAQTIPLTGWIAERKQEGVPFLILGDFNRWLH---PGDDVLQKMEQVAPLTLLTVNRRD 274
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSY-----DQSDLDTRRSK--------- 107
C+ S +D+ + ++++ S +++Y + + R +
Sbjct: 275 PCH---HGASFIDHILAGGVARSWIDPESLRVMTYGPATTSKPEGQAMRYQLPWTRMPPG 331
Query: 108 ----------LSTHCPLTIEY 118
LS HCP++I
Sbjct: 332 KLIQPDSSDGLSDHCPVSIRL 352
>gi|260777714|ref|ZP_05886607.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605727|gb|EEX32012.1| hypothetical protein VIC_003111 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 296
Score = 90.9 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 12/125 (9%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
+L QG+ L +W ++ + G + I GDFN ++ GD W+ + + +
Sbjct: 178 ILKSQGKVLNQWISERERQGQNYAILGDFNHNLSYNGDW--LWEVISHSSQAVLATKGTP 235
Query: 61 STCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLDT---RRSKLSTHCPL 114
+TC V R + + +ID + ++ + +Q T + LS HCP+
Sbjct: 236 ATCKVRSRKNPNKTHQFRSLID----HIIVSPGLTTAQTNQDVFPTSLVLQHHLSDHCPI 291
Query: 115 TIEYD 119
+ + +
Sbjct: 292 STQLN 296
>gi|295689871|ref|YP_003593564.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
21756]
gi|295431774|gb|ADG10946.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
21756]
Length = 288
Score = 90.9 bits (224), Expect = 6e-17, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 14/120 (11%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKM---DPDGLLIRFPQE 58
L +Q L++W D + G+ F + GDFNR++ D W+++ DP + +
Sbjct: 179 LMRQVPILERWIDARAAEGVRFAVLGDFNRRLA--RADDVVWREIDDADPPNADLSLAEG 236
Query: 59 KESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
R +D+ V+D L F ++Y + S HCP+
Sbjct: 237 SAGPKC-DPRYSEFIDHIVLDARAARDL--EGFEELTY------AAGERGSDHCPVLARL 287
>gi|71278943|ref|YP_268710.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
psychrerythraea 34H]
gi|71144683|gb|AAZ25156.1| endonuclease/exonuclease/phosphatase family protein [Colwellia
psychrerythraea 34H]
Length = 301
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 6/125 (4%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINS-----IGDTDDFWQKMDPDGLLIR-F 55
LS+Q L++W D +++ GDFNR+ + + WQ ++ DG
Sbjct: 177 LSKQISPLEQWIDLHASQDAAYIVLGDFNRRFSQDIALKYSEDKGLWQALNDDGKETLWT 236
Query: 56 PQEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLT 115
P ++ K +D+ + K I++SF + + LS HCP++
Sbjct: 237 PTMTANSGCWGGYYKEYIDHIIFSPKAKEKYIESSFEQLIFKPKYTKELSRNLSDHCPIS 296
Query: 116 IEYDF 120
++
Sbjct: 297 VKVKL 301
>gi|323497286|ref|ZP_08102305.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326]
gi|323317643|gb|EGA70635.1| metal-dependent hydrolase [Vibrio sinaloensis DSM 21326]
Length = 232
Score = 85.9 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 12/124 (9%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
+L QQGE L +W ++K +VI GDFN ++ D W + Q
Sbjct: 114 ILKQQGERLNQWINEKEVANQAYVILGDFNHNLSYPNDW--LWNTLTQSNRAQLATQRTR 171
Query: 61 STCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLDT---RRSKLSTHCPL 114
+ C V R + + + +ID + ++ + + + Q + + +LS HCP+
Sbjct: 172 AECKVRSRKQPNKTHSFRSLID----HIIVSDQIKLSAPKQDVYPSQQVLKHQLSDHCPI 227
Query: 115 TIEY 118
T +
Sbjct: 228 TAQL 231
>gi|323491827|ref|ZP_08097002.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546]
gi|323313962|gb|EGA67051.1| hypothetical protein VIBR0546_11562 [Vibrio brasiliensis LMG 20546]
Length = 296
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 12/124 (9%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
+L QQG L W Q+ ++I GDFN + D W ++ D + +
Sbjct: 178 ILKQQGRALNGWIKQREAAKDAYIILGDFNHNMGYQRDW--LWDEIAQDTQATLVSKSTK 235
Query: 61 STCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLD---TRRSKLSTHCPL 114
+ C V RN + +ID + ++ S + Q +LS HCPL
Sbjct: 236 AECKVRSRNNPRKTHQFRSLID----HIIVSESLTASKPKQDVYPVEDVLNHQLSDHCPL 291
Query: 115 TIEY 118
+ +
Sbjct: 292 SSDI 295
>gi|91224719|ref|ZP_01259980.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01]
gi|91190607|gb|EAS76875.1| hypothetical protein V12G01_08258 [Vibrio alginolyticus 12G01]
Length = 287
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 8/124 (6%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W + + ++ +
Sbjct: 168 IVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQGDW--LWDVISDNTSAKLVTKDTK 225
Query: 61 STCNVIKRNKSSLDY---FVIDR-DNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTI 116
+ C V + + VID L +S + D+ KLS HCP++
Sbjct: 226 AECKVRSNRNPNKTHQFRSVIDHIIASGDLKASSGVQTVFKTQDV--LDYKLSDHCPVST 283
Query: 117 EYDF 120
F
Sbjct: 284 TLTF 287
>gi|148982124|ref|ZP_01816600.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3]
gi|145960657|gb|EDK26003.1| hypothetical protein VSWAT3_19371 [Vibrionales bacterium SWAT-3]
Length = 291
Score = 83.6 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 12/124 (9%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L +Q + L KW Q+ + + I GDFN + D W+++ ++ +
Sbjct: 174 LKEQAQQLNKWIKQRERNNEDYAILGDFNHNLAYSRDW--IWKELTQYTDAQLATRKTRA 231
Query: 62 TCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLDT---RRSKLSTHCPLT 115
C V + + VID + ++ S + Q T KLS HCP++
Sbjct: 232 DCKVRSNRNNHRTHQFRSVID----HIVVSESLNAAPAKQQVFKTQDVLDYKLSDHCPVS 287
Query: 116 IEYD 119
+
Sbjct: 288 TTIN 291
>gi|269967746|ref|ZP_06181794.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B]
gi|269827652|gb|EEZ81938.1| hypothetical protein VMC_32240 [Vibrio alginolyticus 40B]
Length = 287
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 16/128 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W + + ++ +
Sbjct: 168 IVKQQGQALAKWIKAREDNKQHYVVLGDFNHNLGYQGDW--LWDVISDNTSAKLVTKDTK 225
Query: 61 STCNVIKRNKS--------SLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V +D+ ++ D L +S + D+ KLS HC
Sbjct: 226 AECKVRSNRNPNKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDV--LDYKLSDHC 279
Query: 113 PLTIEYDF 120
P++ F
Sbjct: 280 PVSTTLTF 287
>gi|254780797|ref|YP_003065210.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040474|gb|ACT57270.1| hypothetical protein CLIBASIA_03440 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 231
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKIN--SIGDTDDFWQKMDPDGLLIRFPQE 58
ML+ Q WLK+W DQK +PF+IAGDFNRKIN G D+ WQK++ D L+R P +
Sbjct: 159 MLNLQATWLKQWVDQKNNLNMPFIIAGDFNRKINHSHSGIKDELWQKINQDNTLMRLPHK 218
Query: 59 K 59
K
Sbjct: 219 K 219
>gi|261251117|ref|ZP_05943691.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891]
gi|260937990|gb|EEX93978.1| metal-dependent hydrolase [Vibrio orientalis CIP 102891]
Length = 292
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 16/125 (12%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L QG+ L KW ++ K +VI GDFN ++ GD W+ + + ++
Sbjct: 175 LKVQGQQLNKWIKEREKNNDAYVILGDFNHNLSYNGDW--LWKGISQGTDATLATKMTKA 232
Query: 62 TCNVIKRNKS--------SLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V RN +D+ ++ D L +S Y D+ R+ +S HCP
Sbjct: 233 NCKVKSRNNPNKTHQFKSLIDHIIVSSD----LGFHSPKQNLYKVDDVLNRQ--MSDHCP 286
Query: 114 LTIEY 118
+++
Sbjct: 287 ISVSI 291
>gi|269959773|ref|ZP_06174152.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835527|gb|EEZ89607.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 287
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W+ + + + +
Sbjct: 168 IVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRGDW--LWEVLSDNTDAKLVTKNTK 225
Query: 61 STCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLDT---RRSKLSTHCPL 114
+ C V + + VID + ++ S Q+ T KLS HCP+
Sbjct: 226 AECKVRSNRNPNKTHQFRSVID----HIIVSGDLKASSGVQTVFKTQDVLDYKLSDHCPV 281
Query: 115 TIEYDF 120
+ F
Sbjct: 282 STTLSF 287
>gi|156976926|ref|YP_001447832.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116]
gi|156528520|gb|ABU73605.1| hypothetical protein VIBHAR_05711 [Vibrio harveyi ATCC BAA-1116]
Length = 287
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 16/128 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W+ + + + +
Sbjct: 168 IVKQQGQALAKWIKAREDNKQQYVVLGDFNHNLGYRGDW--LWEVLSDNTDAKLVTKNTK 225
Query: 61 STCNVIKRNKS--------SLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V +D+ ++ D L +S + D+ KLS HC
Sbjct: 226 AECKVRSNRNPKKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDV--LDYKLSDHC 279
Query: 113 PLTIEYDF 120
P++ F
Sbjct: 280 PVSTTLTF 287
>gi|218676474|ref|YP_002395293.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus
LGP32]
gi|218324742|emb|CAV26393.1| Endonuclease/Exonuclease/phosphatase family [Vibrio splendidus
LGP32]
Length = 291
Score = 82.1 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L Q + L KW Q+ + G + I GDFN ++ D W+ + + ++ +
Sbjct: 174 LKDQAQQLNKWIQQRERQGQDYAILGDFNHNLSYSRDW--MWKDLTQNADAQLATRKTRA 231
Query: 62 TCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLDT---RRSKLSTHCPLT 115
C V + + VID + ++ S Q +T KLS HCP++
Sbjct: 232 DCKVRSNRNNHRTHQFRSVID----HIVVSKSLDASPAKQKVFETQDVLDYKLSDHCPVS 287
Query: 116 I 116
Sbjct: 288 T 288
>gi|114798114|ref|YP_760171.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
neptunium ATCC 15444]
gi|114738288|gb|ABI76413.1| endonuclease/exonuclease/phosphatase family protein [Hyphomonas
neptunium ATCC 15444]
Length = 442
Score = 81.7 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L Q + L+ W DQ+ G ++ GDFNR++ + + D W ++ +
Sbjct: 332 LFDQADVLEAWIDQRSAAGRAVIVGGDFNRRLEA--EDDPVWTGLNDGTPAGLHIAGAGT 389
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
+ R + +D+ ++ ++ SF +Y D R S HCP+++
Sbjct: 390 GPSCDPRYREFIDFLLLSDTALTRMVAGSFRETTY---DTPARP---SDHCPISLSI 440
>gi|153832821|ref|ZP_01985488.1| metal-dependent hydrolase [Vibrio harveyi HY01]
gi|148870955|gb|EDL69845.1| metal-dependent hydrolase [Vibrio harveyi HY01]
Length = 287
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 16/128 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W + + + +
Sbjct: 168 IVKQQGQALAKWIKARENNKQQYVVLGDFNHNLGYRGDW--LWDVLSDNTDAKLVTKNTK 225
Query: 61 STCNVIKRNKS--------SLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V +D+ ++ D L +S + D+ KLS HC
Sbjct: 226 AECKVRSNRNPKKTHQFRSVIDHIIVSGD----LKASSGVQTVFKTQDV--LDYKLSDHC 279
Query: 113 PLTIEYDF 120
P++ F
Sbjct: 280 PVSTTLTF 287
>gi|84393951|ref|ZP_00992692.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01]
gi|84375450|gb|EAP92356.1| hypothetical protein V12B01_14350 [Vibrio splendidus 12B01]
Length = 292
Score = 80.5 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L Q + L KW Q+ + G + I GDFN ++ D W+ M + ++ +
Sbjct: 174 LKDQAKQLNKWIQQRERKGEDYAILGDFNHNLSYSRDW--MWKDMTQNTDAQLVTRKTRA 231
Query: 62 TCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLDT---RRSKLSTHCPLT 115
C V + + VID + ++ S Q +T KLS HCP++
Sbjct: 232 DCKVRSNRNNHRTHQFRSVID----HIVVSKSLDASPAKQKVFETQDVLDYKLSDHCPVS 287
Query: 116 I 116
Sbjct: 288 T 288
>gi|163804004|ref|ZP_02197820.1| hypothetical protein 1103602000450_AND4_08521 [Vibrio sp. AND4]
gi|159172186|gb|EDP57103.1| hypothetical protein AND4_08521 [Vibrio sp. AND4]
Length = 261
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 16/128 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
++ QQG+ L KW + +V+ GDFN + GD W+ + D ++ +
Sbjct: 142 IVKQQGQALAKWMKAREDNKQHYVVLGDFNHNLGYRGDW--LWRVLSDDTDAKLMTKDTQ 199
Query: 61 STCNVIKRNKS--------SLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V +D+ ++ L+ + + D+ KLS HC
Sbjct: 200 AQCKVRSNRNPNKTHQFRSMIDHIIVSGQ----LMASPSVQTVFKTQDV--LDYKLSDHC 253
Query: 113 PLTIEYDF 120
P++ F
Sbjct: 254 PVSSVLSF 261
>gi|328470709|gb|EGF41620.1| hypothetical protein VP10329_07912 [Vibrio parahaemolyticus 10329]
Length = 293
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 16/121 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
LSQQGE L KW ++ K + + GDFN ++ D W M ++ ++
Sbjct: 174 LSQQGEALAKWVSEREKKKEQYAVMGDFNHNLSYQRDW--LWAIMTLGNDAQLVTRDTQA 231
Query: 62 TCNVIKRNKSS--------LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V S +D+ ++ K + + D+ KLS HCP
Sbjct: 232 DCKVRSNKNPSKTHQFRSLIDHIIVSPQIKAK----NAHQTLFSSQDV--LDYKLSDHCP 285
Query: 114 L 114
+
Sbjct: 286 V 286
>gi|260770527|ref|ZP_05879460.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972]
gi|260615865|gb|EEX41051.1| hypothetical protein VFA_003594 [Vibrio furnissii CIP 102972]
Length = 264
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLL--IRFPQEK 59
L QG+ L W Q+ +VI GDFN + GD WQ M L+ ++
Sbjct: 144 LLTQGKALNAWIKQREAKQQAYVILGDFNHNLAYRGDW--LWQTMTQGTLIEPTLASRQT 201
Query: 60 ESTCNVIKR--------NKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTH 111
+TC V R +S +D+ +I L ++ V+++ D+ R LS H
Sbjct: 202 PATCKVRSRQQPNQLHQFRSLIDHIIISPT----LKASATQQVNFESQDV--LRYALSDH 255
Query: 112 CPLTIEYD 119
CPL E
Sbjct: 256 CPLRSELQ 263
>gi|260773808|ref|ZP_05882723.1| hypothetical protein VIB_002285 [Vibrio metschnikovii CIP 69.14]
gi|260610769|gb|EEX35973.1| hypothetical protein VIB_002285 [Vibrio metschnikovii CIP 69.14]
Length = 299
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 14/122 (11%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDP--DGLLIRFPQE 58
+L QG+ L +W ++ + F+I GDFN + GD W+ ++ + + QE
Sbjct: 178 ILKTQGKALNRWLQERERHQHAFMILGDFNHNLAYQGDW--LWKIINQELNKPVQLATQE 235
Query: 59 KESTCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLDTR---RSKLSTHC 112
+ C V R + + +ID + ++ + Q R +LS HC
Sbjct: 236 TPARCQVRSRRQPDTLHRFRSLID----HMIVSSQVVYQQIQQIVFPADEVLRYRLSDHC 291
Query: 113 PL 114
P+
Sbjct: 292 PI 293
>gi|260365700|ref|ZP_05778214.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030]
gi|260896112|ref|ZP_05904608.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466]
gi|308094717|ref|ZP_05891469.2| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034]
gi|308126490|ref|ZP_05910491.2| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037]
gi|308088090|gb|EFO37785.1| metal-dependent hydrolase [Vibrio parahaemolyticus Peru-466]
gi|308090251|gb|EFO39946.1| metal-dependent hydrolase [Vibrio parahaemolyticus AN-5034]
gi|308109923|gb|EFO47463.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ4037]
gi|308111792|gb|EFO49332.1| metal-dependent hydrolase [Vibrio parahaemolyticus K5030]
Length = 288
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 16/121 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
LSQQGE L KW ++ K + + GDFN ++ D W M ++ ++
Sbjct: 169 LSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQRDW--LWAIMTLGNDAQLVTRDTQA 226
Query: 62 TCNVIKRNKSS--------LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V S +D+ ++ K + + D+ KLS HCP
Sbjct: 227 DCKVRSNKNPSKTHQFRSLIDHIIVSPQIKAK----NAHQTLFSSQDV--LDYKLSDHCP 280
Query: 114 L 114
+
Sbjct: 281 V 281
>gi|28900797|ref|NP_800452.1| hypothetical protein VPA0942 [Vibrio parahaemolyticus RIMD 2210633]
gi|28809243|dbj|BAC62285.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 293
Score = 77.4 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 16/121 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
LSQQGE L KW ++ K + + GDFN ++ D W M ++ ++
Sbjct: 174 LSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQRDW--LWAIMTLGNDAQLVTRDTQA 231
Query: 62 TCNVIKRNKSS--------LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V S +D+ ++ K + + D+ KLS HCP
Sbjct: 232 DCKVRSNKNPSKTHQFRSLIDHIIVSPQIKAK----NAHQTLFSSQDV--LDYKLSDHCP 285
Query: 114 L 114
+
Sbjct: 286 V 286
>gi|153836873|ref|ZP_01989540.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810]
gi|149749831|gb|EDM60576.1| metal-dependent hydrolase [Vibrio parahaemolyticus AQ3810]
Length = 288
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 16/121 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
LSQQGE L KW ++ K + + GDFN ++ D W M ++ ++
Sbjct: 169 LSQQGEALAKWMSEREKKKEQYAVMGDFNHNLSYQRDW--LWAIMTLGNDAQLVTRDTQA 226
Query: 62 TCNVIKRNKSS--------LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V S +D+ ++ K N+ + Q D KLS HCP
Sbjct: 227 DCKVRSNKNPSKTHQFRSLIDHIIVSPQIKAK---NAHQTLFISQ---DVLDYKLSDHCP 280
Query: 114 L 114
+
Sbjct: 281 V 281
>gi|315181613|gb|ADT88526.1| Metal-dependent hydrolase [Vibrio furnissii NCTC 11218]
Length = 264
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 18/128 (14%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLL--IRFPQEK 59
L QG+ L W Q+ +VI GDFN + GD WQ M L+ ++
Sbjct: 144 LLTQGKALNAWIKQRESKQQAYVILGDFNHNLAYRGDW--LWQTMTQGTLIEPTLASRQT 201
Query: 60 ESTCNVIKR--------NKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTH 111
+TC V R +S +D+ ++ L + V+++ D+ R LS H
Sbjct: 202 PATCKVRSRQQPNQLHQFRSLIDHIIVSPT----LKASDTQQVNFESQDV--LRYALSDH 255
Query: 112 CPLTIEYD 119
CPL E
Sbjct: 256 CPLRSELQ 263
>gi|262274141|ref|ZP_06051953.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886]
gi|262221951|gb|EEY73264.1| hypothetical protein VHA_001117 [Grimontia hollisae CIP 101886]
Length = 252
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 18/131 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPD---GLLIRFPQE 58
L Q E L W + ++K G F+IAGDFN +N + W+++ D L++ +
Sbjct: 126 LDHQIEALSVWINARLKLGQDFIIAGDFNHYLNDKNEW--VWKQLLLDVGEDNLVKLTKG 183
Query: 59 KESTCNVIKR-----------NKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSK 107
+ C K + +D+ + + + L Y + T +
Sbjct: 184 TPAKCKARKYNYRTKRWEHVVYQKLIDHIIASKGAVSALNPPQARQYQYSYHAVAT--YR 241
Query: 108 LSTHCPLTIEY 118
LS HCP+ ++
Sbjct: 242 LSDHCPIVVDL 252
>gi|109896633|ref|YP_659888.1| endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica
T6c]
gi|109698914|gb|ABG38834.1| Endonuclease/exonuclease/phosphatase [Pseudoalteromonas atlantica
T6c]
Length = 331
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+QQ L++W G+P+++ GDFN ++ S + + ++ D I +
Sbjct: 222 LAQQVPVLEEWLAAHQTLGVPYMVLGDFNHRLAS--ENNYLASRLTSDEYGIDIATQALR 279
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTI 116
C R +D+ ++ LI S + Y D + + LS HC +++
Sbjct: 280 GC--HPRYPEPIDHILLGGMQST-LIAASAHVHRYKNMDEE---AMLSDHCAVSL 328
>gi|262395406|ref|YP_003287259.1| metal-dependent hydrolase [Vibrio sp. Ex25]
gi|262339000|gb|ACY52794.1| metal-dependent hydrolase [Vibrio sp. Ex25]
Length = 288
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 16/121 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
LSQQGE L KW ++ K + + GDFN ++ D W M ++ ++
Sbjct: 169 LSQQGEALAKWMSEREKKKQQYAVMGDFNHNLSYQRDW--LWAIMTLGNDAQLVTRDTKA 226
Query: 62 TCNVIKRNKS--------SLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
C V +D+ ++ K + + D+ KLS HCP
Sbjct: 227 DCKVRSNKNPRKTHQFRSLIDHIIVSPQIKAK----NAHQTLFSSQDV--LDYKLSDHCP 280
Query: 114 L 114
+
Sbjct: 281 V 281
>gi|197337596|ref|YP_002157871.1| metal-dependent hydrolase [Vibrio fischeri MJ11]
gi|197314848|gb|ACH64297.1| metal-dependent hydrolase [Vibrio fischeri MJ11]
Length = 323
Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 49/123 (39%), Gaps = 7/123 (5%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLL--IRFPQEK 59
L QQ + + +W + + ++I GDFN + W+ + + + ++
Sbjct: 202 LKQQTDEVIEWINSREANNEEYLILGDFNHTLAHPRSW--LWKNIKSNTSDTPLLLTEDT 259
Query: 60 ESTC---NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTI 116
++ C + + + + + SF + ++ D ++ +LS HCP+
Sbjct: 260 KARCTVKQWKRDWPKYTTFTRLIDHGITNISNRSFQVTQQQFTEADVKKYQLSDHCPILF 319
Query: 117 EYD 119
E +
Sbjct: 320 EMN 322
>gi|149190193|ref|ZP_01868468.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1]
gi|148835940|gb|EDL52902.1| hypothetical protein VSAK1_14887 [Vibrio shilonii AK1]
Length = 301
Score = 74.0 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKM--DPDGLLIRFPQEK 59
L +QG+ + W Q + +++ GDFN + GD W+ + D Q+
Sbjct: 181 LKKQGKVINSWLKQVEQQNELYIVLGDFNHNLAYSGDW--LWKTITNGLDTAPRLTSQQT 238
Query: 60 ESTCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQSDLD---TRRSKLSTHCP 113
++TC V R + + +ID + ++ QS + + ++S HCP
Sbjct: 239 KATCKVKSRKNNDKIHQFRSLID----HIIVSPELRTSPAVQSLMPVEDVLKHQMSDHCP 294
Query: 114 LTIEY 118
L+IE
Sbjct: 295 LSIEL 299
>gi|37676556|ref|NP_936952.1| hypothetical protein VVA0896 [Vibrio vulnificus YJ016]
gi|37201098|dbj|BAC96922.1| hypothetical protein [Vibrio vulnificus YJ016]
Length = 297
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L + + L +W Q+ +++ GDFN + D ++ G + ++ ++
Sbjct: 178 LRLESQALGQWISQRQSNKQTYLVLGDFNHNLAYRNDW--LMNELTSAGKIHLLTEDTKA 235
Query: 62 TCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQ---SDLDTRRSKLSTHCPLT 115
C V + + + + +ID + ++ S +Q + D + +LS HCP++
Sbjct: 236 NCKVRSKKQPNKVHSFRSLID----HIIVSEGLSASQAEQKLFTSNDVLKYQLSDHCPVS 291
Query: 116 IEYDFE 121
Sbjct: 292 TTVTLP 297
>gi|27366781|ref|NP_762308.1| metal-dependent hydrolase [Vibrio vulnificus CMCP6]
gi|27358348|gb|AAO07298.1|AE016809_60 Metal-dependent hydrolase [Vibrio vulnificus CMCP6]
Length = 297
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L + + L +W Q+ +++ GDFN + D ++ G + ++ ++
Sbjct: 178 LRLESQALGQWISQRQSNKQTYLVLGDFNHNLAYRNDW--LMNELTSAGKIHLLTEDTKA 235
Query: 62 TCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQ---SDLDTRRSKLSTHCPLT 115
C V + + + + +ID + ++ S +Q + D + +LS HCP++
Sbjct: 236 NCKVRSKKQPNKVHSFRSLID----HIIVSEGLSASQAEQKLFTSNDVLKYQLSDHCPVS 291
Query: 116 IEYDFE 121
Sbjct: 292 TTVTLP 297
>gi|320158664|ref|YP_004191042.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
gi|319933976|gb|ADV88839.1| metal-dependent hydrolase [Vibrio vulnificus MO6-24/O]
Length = 297
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L + + L +W Q+ +++ GDFN + D ++ G + ++ ++
Sbjct: 178 LRLESQALGQWISQRQNNKQNYLVLGDFNHNLAYRNDW--LMNELTSAGKIHLLTEDTKA 235
Query: 62 TCNVIKRNKSSLDY---FVIDRDNKNFLIDNSFSIVSYDQ---SDLDTRRSKLSTHCPLT 115
C V + + + + +ID + ++ S +Q + D + +LS HCP++
Sbjct: 236 NCKVRSKKQPNKVHSFRSLID----HIIVSEGLSASQAEQKLFTSNDVLKYQLSDHCPVS 291
Query: 116 IEYDFE 121
Sbjct: 292 TTVTLP 297
>gi|59713463|ref|YP_206238.1| hypothetical protein VF_A0280 [Vibrio fischeri ES114]
gi|59481711|gb|AAW87350.1| hypothetical protein VF_A0280 [Vibrio fischeri ES114]
Length = 323
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 48/123 (39%), Gaps = 7/123 (5%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLL--IRFPQEK 59
L QQ + + +W + + ++I GDFN + W+ + + + ++
Sbjct: 202 LKQQTDEVIEWINSREANNEEYLILGDFNHTLAHPRSW--LWKNIKNNTSDTPLLLTEDT 259
Query: 60 ESTC---NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTI 116
++ C + + + + + SF + + D ++ +LS HCP+
Sbjct: 260 KARCTVKQWKRDWPKYTTFTRLIDHGITNISNRSFQVTQQQFIESDVKKYQLSDHCPILF 319
Query: 117 EYD 119
E +
Sbjct: 320 EMN 322
>gi|88860700|ref|ZP_01135337.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2]
gi|88817295|gb|EAR27113.1| hypothetical protein PTD2_05565 [Pseudoalteromonas tunicata D2]
Length = 316
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 50/121 (41%), Gaps = 9/121 (7%)
Query: 3 SQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKM--DPDGLLIRFPQEKE 60
++Q WL KW ++K + P+++ GDFN ++ D + Q++ + +G +
Sbjct: 203 AKQAVWLDKWFERKEASKQPYIVMGDFNHRLA--TDNNRLMQELANNSNGAASTLKHITQ 260
Query: 61 STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120
+ + R + +D+ ++ + + + + LS HC +T
Sbjct: 261 NVVSCHPRYPAPIDHQFAGGFSQAIPTNVQMRYFA-----DKSETAMLSDHCAVTFTLKA 315
Query: 121 E 121
E
Sbjct: 316 E 316
>gi|90578074|ref|ZP_01233885.1| hypothetical protein VAS14_13524 [Vibrio angustum S14]
gi|90441160|gb|EAS66340.1| hypothetical protein VAS14_13524 [Vibrio angustum S14]
Length = 287
Score = 67.4 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 17/130 (13%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDD--FWQKMDPDGLLIRFPQEK 59
L+ Q L++W Q+ PF++ GDFN I + F+ + G L
Sbjct: 158 LNFQRTLLQQWIKQQQINKQPFILVGDFNHHIAFKTTNNATNFFSSNNKQGPLKWLTNNV 217
Query: 60 ESTCNVIK---------RNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLST 110
+ C K K +D+ +++F I S + Y + + T +LS
Sbjct: 218 KGNCLTKKIKNKKVYYRHYKELIDH---GFSSEHFNIT-SVQQLPYSKEQVST--YQLSD 271
Query: 111 HCPLTIEYDF 120
HCP+ F
Sbjct: 272 HCPVIFSLSF 281
>gi|209809561|ref|YP_002265100.1| membrane protein [Aliivibrio salmonicida LFI1238]
gi|208011124|emb|CAQ81546.1| membrane protein [Aliivibrio salmonicida LFI1238]
Length = 321
Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 19/124 (15%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLL--IRFPQEK 59
L QQ E + W +++ + ++I GDFN + W+++ ++
Sbjct: 200 LEQQTEEVIDWINERNEKKQDYLILGDFNHTLAHPRSW--VWKEIQKGTPQDPYLLTEDT 257
Query: 60 ESTCNVI-KRNKSS--------LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLST 110
+ C V + +D+ + + K + YDQ+D+ + +L+
Sbjct: 258 KGNCTVKQWKRNWPKYTTFTRLIDHGISNLSLKKV----EVEQLLYDQNDVK--KFQLTD 311
Query: 111 HCPL 114
HCP+
Sbjct: 312 HCPI 315
>gi|330448573|ref|ZP_08312221.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
gi|328492764|dbj|GAA06718.1| endonuclease/Exonuclease/phosphatase family protein [Photobacterium
leiognathi subsp. mandapamensis svers.1.1.]
Length = 283
Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+ Q + +++W + + +PF++ GDFN +I+ D+ + + L Q
Sbjct: 159 LNLQRKIVQQWVNNQQTKQVPFIVVGDFNHRIHQPPSIDNGFISSSANKPLKWLSQNING 218
Query: 62 TCNVI---------KRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+C ++ K +D+ + +F++ NS + + + ++ + +LS HC
Sbjct: 219 SCLAKVTKNNRVYYRQYKQLIDH---GFSSVHFIL-NSAQQIQFAKHQVE--QYQLSDHC 272
Query: 113 PLTIEYDF 120
PL
Sbjct: 273 PLLFNLTL 280
>gi|312883334|ref|ZP_07743060.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309368950|gb|EFP96476.1| Endonuclease/Exonuclease/phosphatase family protein [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 303
Score = 62.8 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 16/132 (12%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
+L +Q + W ++ K +++ GDFN +I W + + Q
Sbjct: 176 ILKEQLININSWIREREKYQHDYIVLGDFNSQIADEAKWA--WYLISKKTQAVLTSQNTT 233
Query: 61 STCNVIK--------RNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+ C V + KS +D+ ++ + + + + D+ R+ +LS HC
Sbjct: 234 AQCYVRSKTKRASVFKYKSIIDHIIVSSSH----TFTTAKQLPFKTKDV--RQYELSDHC 287
Query: 113 PLTIEYDFEKGN 124
P+ IE + N
Sbjct: 288 PVIIEASYTSMN 299
>gi|221134816|ref|ZP_03561119.1| endonuclease/exonuclease/phosphatase [Glaciecola sp. HTCC2999]
Length = 321
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 8/119 (6%)
Query: 3 SQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKEST 62
+QQ L W + + I +V+ GDFN ++++ + + DG
Sbjct: 208 AQQAPILDAWVETQESEDIQYVLLGDFNHRLSAPYNHLTRQLMTNSDGSESTLYNTTGQL 267
Query: 63 CNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSK--LSTHCPLTIEYD 119
+ +D + + DN + +Y + K LS HC ++++ +
Sbjct: 268 IGCHPYYPAPIDLVFVGG-----MSDNKY-DYTYQAHTFNNMAPKAMLSDHCAVSLQIE 320
>gi|269957862|ref|YP_003327651.1| 5'-Nucleotidase domain-containing protein [Xylanimonas
cellulosilytica DSM 15894]
gi|269306543|gb|ACZ32093.1| 5'-Nucleotidase domain protein [Xylanimonas cellulosilytica DSM
15894]
Length = 1577
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 18/135 (13%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q L+ W D+ + G + GDFN + D D +
Sbjct: 704 RQATALRDWVDEVTEPGEAVALIGDFN----AYTHEDPLQVLYDAGYTDAASTLSSDQWS 759
Query: 64 NVIKRNKSSLDYFVIDRDNKN-------FLIDNSFSI-VSYDQSDL------DTRRSKLS 109
SLD+ +++ + I+ SI + Y + + + S
Sbjct: 760 YSFGGLSGSLDHVLLNGPATERATGADVWEINADESIALQYSRYNYHGTLFHAPDQFASS 819
Query: 110 THCPLTIEYDFEKGN 124
H P+ + ++ N
Sbjct: 820 DHNPVVVGLTADEDN 834
>gi|319944723|ref|ZP_08018987.1| hypothetical protein HMPREF0551_1835 [Lautropia mirabilis ATCC
51599]
gi|319741972|gb|EFV94395.1| hypothetical protein HMPREF0551_1835 [Lautropia mirabilis ATCC
51599]
Length = 484
Score = 48.2 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 28/147 (19%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKI------------------NSIGDTDDF- 42
L Q L+ W D+++ G +I+GDFNR + I +D+
Sbjct: 338 LQSQVPALEGWLDRQMAAGHAVLISGDFNRDLRQELRQGLPARGDGSPAAAPIRTSDEMR 397
Query: 43 -----WQKMDPDGLL-IRFPQEKESTCNVIKRNKSSLDYFVIDRDNKNFLI--DNSFSI- 93
++D D R + R +D F++ + +L +
Sbjct: 398 RVASVLPELDDDQPRGTRLTLVASGPYRKLARCHHHIDVFLLSHNLDAWLRTPPEDLRVQ 457
Query: 94 VSYDQSDLDTRRSKLSTHCPLTIEYDF 120
V ++ L R + S HCP ++
Sbjct: 458 VVPFEAPLSLERPRPSDHCPHVLQLPL 484
>gi|86148017|ref|ZP_01066320.1| Metal-dependent hydrolase [Vibrio sp. MED222]
gi|85834241|gb|EAQ52396.1| Metal-dependent hydrolase [Vibrio sp. MED222]
Length = 215
Score = 48.2 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDT 39
L Q + L KW Q+ + G + I GDFN ++
Sbjct: 174 LKDQAQQLNKWIQQRERQGQDYAILGDFNHNLSYSEIG 211
>gi|332530427|ref|ZP_08406371.1| hypothetical protein HGR_10877 [Hylemonella gracilis ATCC 19624]
gi|332040139|gb|EGI76521.1| hypothetical protein HGR_10877 [Hylemonella gracilis ATCC 19624]
Length = 475
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRF--PQEKEST 62
Q L++W D++ FV+ GDFNR + DP L ++ ++
Sbjct: 283 QVPVLERWVDERAAAKEEFVVLGDFNRNLQGEDSKTARSDNTDPKTPLKCSFNARDGKTE 342
Query: 63 C 63
C
Sbjct: 343 C 343
>gi|229016371|ref|ZP_04173315.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
gi|229022601|ref|ZP_04179127.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
gi|228738692|gb|EEL89162.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1272]
gi|228744927|gb|EEL94985.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1273]
Length = 788
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + QK T P V+ GD N + + D +L P+E
Sbjct: 674 LAQEVNQFVQGI-QKKNTNAPVVVLGDMN-DFEFSKPLEALQGTILKD-MLNTVPKENRY 730
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 731 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 785
Query: 122 KGN 124
K +
Sbjct: 786 KAS 788
>gi|254476088|ref|ZP_05089474.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11]
gi|214030331|gb|EEB71166.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. R11]
Length = 331
Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 30/143 (20%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGD-------------FNRKINSIGDTDDFWQKMDPDGL 51
Q WL++ DQ++ G ++ GD FNR I D DP
Sbjct: 193 QAIWLRRRIDQRLAEGQDVIVLGDLNDGPGLDQYEKLFNRSSVEIVMNSDLH---DPHAQ 249
Query: 52 LIRFPQEKESTCNVIKRNKSS-------LDYFVID----RDNKNFLIDNSFSIVSYDQSD 100
+ P+ + NK + LDY ++ R + I + F + + D
Sbjct: 250 SLLAPRLRVLPSTARFYNKETRRYFSALLDYIMLSPGLMRHQPRWRIWHPFEDAACYE-D 308
Query: 101 LDTRRSKL--STHCPLTIEYDFE 121
R + L S H P++++ D
Sbjct: 309 APLREALLQASDHFPVSLDIDLP 331
>gi|229189268|ref|ZP_04316289.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
gi|228594168|gb|EEK51966.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 10876]
Length = 788
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + + QK T P V+ GD N + D +L P+E
Sbjct: 674 LAQEVNYFVQGI-QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRY 730
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ + ++S H P+ + D +
Sbjct: 731 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKEQGRVSDHDPVLAQIDLK 785
Query: 122 KGN 124
K +
Sbjct: 786 KAS 788
>gi|229131979|ref|ZP_04260843.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
gi|228651483|gb|EEL07454.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST196]
Length = 788
Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
Q+ T P V+ GD N + + D +L P+E T + + N LD
Sbjct: 686 QEKNTNAPVVVLGDMN-DFEFSKPLEALEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ ++ D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLVQIDLKKAS 788
>gi|229166011|ref|ZP_04293775.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
gi|228617422|gb|EEK74483.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH621]
Length = 788
Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
Q+ T P V+ GD N + + D +L P+E T + + N LD
Sbjct: 686 QEKNTNAPVVVLGDMN-DFEFSKPLEALEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ ++ D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLVQIDLKKAS 788
>gi|163938988|ref|YP_001643872.1| endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
KBAB4]
gi|163861185|gb|ABY42244.1| Endonuclease/exonuclease/phosphatase [Bacillus weihenstephanensis
KBAB4]
Length = 788
Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
Q+ T P V+ GD N + + D +L P+E T + + N LD
Sbjct: 686 QEKNTNAPVVVLGDMN-DFEFSKPLEALEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ ++ D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLVQIDLKKAS 788
>gi|190892922|ref|YP_001979464.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652]
gi|190698201|gb|ACE92286.1| hypothetical protein RHECIAT_CH0003338 [Rhizobium etli CIAT 652]
Length = 357
Score = 42.8 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 64/174 (36%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGD------------------TDDFW 43
L +Q + L +W + G ++AGDFNR++ GD + + W
Sbjct: 190 LMKQADILSEWIKTERAAGKRVIVAGDFNRQLLDRGDHVAAKLRAVDAGVQFYPTSRECW 249
Query: 44 QKMDPDGLLIRFPQEKESTCNVIKRNKSS---------LDYFVIDRDNKNFLI------- 87
G I ++ + +DYFV+ I
Sbjct: 250 ASFPNRGAAIIAAANQKFPEIAAAGGRPLPYSPKSNSKIDYFVVSGPAPQTPISSGQYAM 309
Query: 88 --------------------DNSF---SIVSYDQSDLDTRRSKLSTHCPLTIEY 118
N F S++++ + + S HCP+++
Sbjct: 310 GGEAKTTELATDYLKTCEGSPNKFEDGSVLTFSEVEP-------SDHCPISMSL 356
>gi|229143782|ref|ZP_04272202.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
gi|228639657|gb|EEK96067.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST24]
Length = 788
Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDSVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|283778620|ref|YP_003369375.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
gi|283437073|gb|ADB15515.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
Length = 309
Score = 42.4 bits (98), Expect = 0.019, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 22/138 (15%)
Query: 3 SQQGEWLKKWADQKIKT---GIPFVIAGDFNRKINSIGDTDD------FWQKMDPDGLLI 53
Q W+KK +Q+ T PF++ GD N ++S D D W +++ ++
Sbjct: 174 KLQSTWVKKLVNQRFGTDPGNNPFIVLGDLNDYLDSASDPDSGIRNLVKWNQVE--NVIE 231
Query: 54 RFPQEKESTCNVIKRNKS-SLDYFVIDRDNKNFLIDNSF-------SIVSYDQSDLDTRR 105
R P + T N+ LDY ++ + + + +Y
Sbjct: 232 RLPAAERWTHYWNGGNEYRQLDYLLVSKSLSSAVQSVEIIRGGLPTRATNYTGPRFPGVG 291
Query: 106 ---SKLSTHCPLTIEYDF 120
K S HCP+ +E
Sbjct: 292 TNDPKASDHCPIVVELKL 309
>gi|291615489|ref|YP_003522597.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4]
gi|291582551|gb|ADE17007.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus halophilus Nc4]
Length = 396
Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 24/128 (18%)
Query: 3 SQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKEST 62
++Q + W ++++ G P ++ GDFN S G D + + P +E ST
Sbjct: 160 ARQLDDYVNWLEEEVAEGDPVILTGDFNLPPESAGFRD-LARVLKP------AIREGAST 212
Query: 63 CNVI-KRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTR--------RSKLSTHCP 113
+ R + D + ++ I R R +S H P
Sbjct: 213 LSAKEGRYANLYDNI--------WYRPDALKIQETRIDRFPQRLGISHNLARKTVSDHAP 264
Query: 114 LTIEYDFE 121
+ I
Sbjct: 265 VVIALGEP 272
>gi|228951535|ref|ZP_04113640.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228808100|gb|EEM54614.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 788
Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + + QK T P V+ GD N + D +L P+E
Sbjct: 674 LAQEVNYFVQGI-QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRY 730
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 731 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 785
Query: 122 KGN 124
K +
Sbjct: 786 KAS 788
>gi|229177605|ref|ZP_04304982.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
gi|228605795|gb|EEK63239.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 172560W]
Length = 788
Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + + QK T P V+ GD N + D +L P+E
Sbjct: 674 LAQEVNYFVQGI-QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRY 730
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 731 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 785
Query: 122 KGN 124
K +
Sbjct: 786 KAS 788
>gi|206968309|ref|ZP_03229265.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
AH1134]
gi|206737229|gb|EDZ54376.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
AH1134]
Length = 788
Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + + QK T P V+ GD N + D +L P+E
Sbjct: 674 LAQEVNYFVQGI-QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRY 730
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 731 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 785
Query: 122 KGN 124
K +
Sbjct: 786 KAS 788
>gi|229010475|ref|ZP_04167677.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
gi|228750673|gb|EEM00497.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides DSM 2048]
Length = 788
Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKALEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + I + + S++ ++S H P+ ++ D +K +
Sbjct: 743 HILVTNNIAPYTIVDP----VHLNSNIMKEHGRVSDHDPVLVQIDLKKAS 788
>gi|229065513|ref|ZP_04200760.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
gi|228715763|gb|EEL67537.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH603]
Length = 190
Score = 42.0 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
Q+ T P V+ GD N + + D +L P+E T + + N LD
Sbjct: 88 QEKNTNAPVVVLGDMN-DFEFSKPLEALEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 144
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ ++ D +K +
Sbjct: 145 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLVQIDLKKAS 190
>gi|229114626|ref|ZP_04244040.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
gi|228668691|gb|EEL24119.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-3]
Length = 786
Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + + QK P V+ GD N + D +L P+E
Sbjct: 672 LAQEVNYFVQGI-QKKNANAPVVVLGDMN-DFEFSKPLKALEGTILKD-MLNTVPKENRY 728
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 729 T-YIHEGNAQVLDHILVTNN----IAPHTVVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 783
Query: 122 KGN 124
K +
Sbjct: 784 KAS 786
>gi|296501782|ref|YP_003663482.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
thuringiensis BMB171]
gi|296322834|gb|ADH05762.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
thuringiensis BMB171]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|228906812|ref|ZP_04070681.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
200]
gi|228852816|gb|EEM97601.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
200]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|228919906|ref|ZP_04083261.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228839722|gb|EEM85008.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|228957450|ref|ZP_04119204.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228802204|gb|EEM49067.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar pakistani str. T13001]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229042920|ref|ZP_04190653.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
gi|228726385|gb|EEL77609.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH676]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229068731|ref|ZP_04202028.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
gi|228714348|gb|EEL66226.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus F65185]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229078378|ref|ZP_04210941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
gi|228704919|gb|EEL57342.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock4-2]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229108638|ref|ZP_04238249.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
gi|228674779|gb|EEL30012.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock1-15]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229126482|ref|ZP_04255496.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
gi|228656871|gb|EEL12695.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-Cer4]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229149383|ref|ZP_04277619.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
gi|228634025|gb|EEK90618.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1550]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|218235001|ref|YP_002365840.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus B4264]
gi|218162958|gb|ACK62950.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
cereus B4264]
Length = 788
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|30019227|ref|NP_830858.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
cereus ATCC 14579]
gi|29894770|gb|AAP08059.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
cereus ATCC 14579]
Length = 738
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + D +L P+E T + + N LD
Sbjct: 636 QKKNTNAPVVVLGDMN-DFEFSKPLKTLEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 692
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 693 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 738
>gi|218902274|ref|YP_002450108.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820]
gi|218539755|gb|ACK92153.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH820]
Length = 788
Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ ++ D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLVQIDLKKAS 788
>gi|324325200|gb|ADY20460.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 788
Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + QK T P V+ GD N + + +L P+E
Sbjct: 674 LAQEVNQFVQDI-QKKNTNAPVVVLGDMN-DFEFAKPLKALEGTILKN-MLNTVPKENRY 730
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + +++ ++S H P+ + D +
Sbjct: 731 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLK 785
Query: 122 KGN 124
K +
Sbjct: 786 KAS 788
>gi|327269725|ref|XP_003219643.1| PREDICTED: 25-hydroxycholesterol 7-alpha-hydroxylase-like [Anolis
carolinensis]
Length = 929
Score = 40.8 bits (94), Expect = 0.054, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 11/120 (9%)
Query: 9 LKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPD------GLLIRFPQEKEST 62
L+ + I +I GDFN ++ I D ++ D G ++ +E
Sbjct: 99 LRDQITKSEAEHI--MIFGDFNGVLDPIQDKTRKTKRPKKDDCRRLPGNMLLMKEEFHLQ 156
Query: 63 CNVIKRNKSSLDYFVIDRDNKNFLIDNSF---SIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
N + DY + ++ + S + + D+ S HCP+T+ +
Sbjct: 157 DIWRYHNPTKRDYTFYSNRHDSWSRIDMIWASSSLLTNSIDIKILPRDKSDHCPITMCLN 216
>gi|228904025|ref|ZP_04068131.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
4222]
gi|228855621|gb|EEN00175.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis IBL
4222]
Length = 792
Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + QK T P V+ GD N + + +L P+E
Sbjct: 678 LAQEVNQFVQGI-QKKNTNAPVVVLGDMN-DFEFAKPLKAL-EGTNLKNMLNTVPKENRY 734
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 735 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 789
Query: 122 KGN 124
K +
Sbjct: 790 KAS 792
>gi|218896127|ref|YP_002444538.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842]
gi|218542051|gb|ACK94445.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus G9842]
Length = 788
Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + QK T P V+ GD N + + +L P+E
Sbjct: 674 LAQEVNQFVQGI-QKKNTNAPVVVLGDMN-DFEFAKPLKAL-EGTNLKNMLNTVPKENRY 730
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 731 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 785
Query: 122 KGN 124
K +
Sbjct: 786 KAS 788
>gi|75759359|ref|ZP_00739455.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74493126|gb|EAO56246.1| Endonuclease/Exonuclease/phosphatase family protein [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 788
Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + QK T P V+ GD N + + +L P+E
Sbjct: 674 LAQEVNQFVQGI-QKKNTNAPVVVLGDMN-DFEFAKPLKAL-EGTNLKNMLNTVPKENRY 730
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 731 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 785
Query: 122 KGN 124
K +
Sbjct: 786 KAS 788
>gi|329767831|ref|ZP_08259347.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341]
gi|328838932|gb|EGF88526.1| hypothetical protein HMPREF0428_01044 [Gemella haemolysans M341]
Length = 748
Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 5 QGEWLKKWADQ--KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEK-ES 61
+ + L + + + + FV+ GDFN +D + + + + E+ +
Sbjct: 525 EAKILNAFIKEGLRQNPNLKFVLTGDFND----FEFSDSVKTIVGNELVNLMAEHEQGDR 580
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ + SLD +I ++ K+ ++ FS V + S ++ + S H P+ ++ DF
Sbjct: 581 YSYFYRGSNQSLDNILISKNIKDKVV---FSPVHINASFMEEHG-RASDHDPVVVQIDFS 636
Query: 122 KGNV 125
K V
Sbjct: 637 KKEV 640
>gi|229095675|ref|ZP_04226655.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
gi|228687708|gb|EEL41606.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-29]
Length = 190
Score = 40.8 bits (94), Expect = 0.058, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + + QK P V+ GD N + D +L P+E
Sbjct: 76 LAQEVNYFVQGI-QKKNANAPVVVLGDMN-DFEFSKPLKALEGTILKD-MLNTVPKENRY 132
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 133 T-YIHEGNAQVLDHILVTNN----IAPHTVVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 187
Query: 122 KGN 124
K +
Sbjct: 188 KAS 190
>gi|77163525|ref|YP_342051.1| endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
19707]
gi|254436414|ref|ZP_05049919.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
AFC27]
gi|300115646|ref|YP_003762220.1| endonuclease/exonuclease/phosphatase [Nitrosococcus watsoni C-113]
gi|76881839|gb|ABA56521.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus oceani ATCC
19707]
gi|207087948|gb|EDZ65222.1| endonuclease/exonuclease/phosphatase family [Nitrosococcus oceani
AFC27]
gi|299541588|gb|ADJ29899.1| Endonuclease/exonuclease/phosphatase [Nitrosococcus watsonii C-113]
Length = 398
Score = 40.8 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 24/128 (18%)
Query: 3 SQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKEST 62
+QQ + W ++ + G P V+ GDFN +S G D + + P +E +T
Sbjct: 160 AQQLDEYVNWLEENVAEGDPVVLMGDFNLPPDSAGFRD-LAKVLKP------AIREGATT 212
Query: 63 CNVI-KRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTR--------RSKLSTHCP 113
+ R + D + ++ I R R +S H P
Sbjct: 213 LSAKEGRYANLYDNI--------WYRPDALKIQEARIDRFPQRLGITHKLARKTVSDHAP 264
Query: 114 LTIEYDFE 121
+ I
Sbjct: 265 VVIVLGDP 272
>gi|229101774|ref|ZP_04232490.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
gi|228681641|gb|EEL35802.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-28]
Length = 190
Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK P V+ GD N + D +L P+E T + + N LD
Sbjct: 88 QKKNANAPVVVLGDMN-DFEFSKPLKALEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 144
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 145 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 190
>gi|228938309|ref|ZP_04100922.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228971187|ref|ZP_04131818.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228977796|ref|ZP_04138180.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
gi|228781906|gb|EEM30100.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis Bt407]
gi|228788514|gb|EEM36462.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228821346|gb|EEM67358.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326938818|gb|AEA14714.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 788
Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
Q+ T P V+ GD N + D +L P+E T + + N LD
Sbjct: 686 QEKNTNAPVVVLGDMN-DFEFSKPLKALEGTILKD-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229171829|ref|ZP_04299400.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
gi|228611649|gb|EEK68900.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus MM3]
Length = 788
Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + QK T P V+ GD N + + +L P+E
Sbjct: 674 LAQEVNQFVQGI-QKKNTNAPVVVLGDMNDF--EFAKPLKILEGTNLKNMLNTVPKENRY 730
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 731 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 785
Query: 122 KGN 124
K +
Sbjct: 786 KAS 788
>gi|333030574|ref|ZP_08458635.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
18011]
gi|332741171|gb|EGJ71653.1| Endonuclease/exonuclease/phosphatase [Bacteroides coprosuis DSM
18011]
Length = 288
Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 9/109 (8%)
Query: 16 KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDY 75
K+ P V+ GDFN + ++D + ++P+ + + V N + DY
Sbjct: 184 KLAKDAPIVLTGDFN----AEPESDVIFNVINPEKERHLLSTHEVAQ-EVKGTNWTFHDY 238
Query: 76 FVIDRDNKNFL----IDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120
+D + + ++ + ++ SY+ + +S HCP+ +F
Sbjct: 239 DRLDINKREYIDYIFVSAPVTVKSYEVLPMKYEGQFVSDHCPVVANIEF 287
>gi|332991677|gb|AEF01732.1| Endonuclease/exonuclease/phosphatase [Alteromonas sp. SN2]
Length = 242
Score = 40.5 bits (93), Expect = 0.075, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 42/121 (34%), Gaps = 20/121 (16%)
Query: 5 QGEWLKKWADQK-IKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
Q L + +Q+ +P V+AGDFN WQ R
Sbjct: 135 QFALLHDYLEQRMQAHPMPLVLAGDFNE-----------WQFFS------RAFTSLNKLL 177
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKG 123
N K + F I ++ ++ D+ VS + + S S H P+ ++ +
Sbjct: 178 NQHKVGATFPSQFPIFSLDRVWVSDDI--TVSECKKLTSKKASVFSDHLPVQLDIRLPEA 235
Query: 124 N 124
N
Sbjct: 236 N 236
>gi|228932469|ref|ZP_04095350.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228827159|gb|EEM72912.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 788
Score = 40.5 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|228944800|ref|ZP_04107163.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228814828|gb|EEM61086.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 788
Score = 40.5 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229120698|ref|ZP_04249941.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
gi|228662703|gb|EEL18300.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus 95/8201]
Length = 788
Score = 40.5 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229183381|ref|ZP_04310608.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
gi|228600097|gb|EEK57690.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BGSC 6E1]
Length = 788
Score = 40.5 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|225863033|ref|YP_002748411.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
03BB102]
gi|225790557|gb|ACO30774.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
cereus 03BB102]
Length = 788
Score = 40.5 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|196036463|ref|ZP_03103859.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W]
gi|195990937|gb|EDX54909.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus W]
Length = 788
Score = 40.5 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|52144237|ref|YP_082591.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L]
gi|51977706|gb|AAU19256.1| endonuclease/exonuclease/phosphatase [Bacillus cereus E33L]
Length = 788
Score = 40.5 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|42780246|ref|NP_977493.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
cereus ATCC 10987]
gi|42736165|gb|AAS40101.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus ATCC
10987]
Length = 788
Score = 40.5 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|295688634|ref|YP_003592327.1| endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
21756]
gi|295430537|gb|ADG09709.1| Endonuclease/exonuclease/phosphatase [Caulobacter segnis ATCC
21756]
Length = 323
Score = 40.5 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 46/129 (35%), Gaps = 19/129 (14%)
Query: 6 GEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGL-----LIRFPQEKE 60
+WL++WA+Q+ G + GDFN D WQ GL L++ P+
Sbjct: 200 AKWLRQWAEQEDDFGHNLIAMGDFN----IDRHGDPLWQAFTSTGLTPAPGLLKVPRTLS 255
Query: 61 STCNVIKRNKSSLDYFV----IDRDNKNFLIDNS-----FSIVSYDQSDLDTRRSKLSTH 111
S+ + KS D + L F V + ++S H
Sbjct: 256 SSLDTP-DLKSFFDQIAWFETVRGRPYLSLKYRQAGGVNFQGVVLKDLNRTELSWRISDH 314
Query: 112 CPLTIEYDF 120
PL +E+
Sbjct: 315 YPLWVEFGL 323
>gi|218670459|ref|ZP_03520130.1| hypothetical protein RetlG_01772 [Rhizobium etli GR56]
Length = 230
Score = 40.1 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 52/167 (31%), Gaps = 50/167 (29%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDT------------------DDFW 43
L +Q + L +W + G ++AGDFNR++ GD W
Sbjct: 63 LMKQTDILSEWIRTERAAGKKVIVAGDFNRQLLDTGDRVAAKLRAVDPGVQFYPTSRQCW 122
Query: 44 QKMDPDGLLIRFPQEKE---------STCNVIKRNKSSLDYFV----------------I 78
G +I ++ ++ S +DYFV +
Sbjct: 123 ASFPNRGAVIIAAANQKFPEIGAAGGRPLPYSPKSNSKIDYFVVSGPVSQTPISSEQYAM 182
Query: 79 DRDNKNFLIDNSFSIVSYDQSDLDTRRSKL-------STHCPLTIEY 118
R+ K + + + + S L S HCP+++
Sbjct: 183 GREAKTTELATDYLKTCEGKPNKFEDGSVLTFSEVEPSDHCPISMTL 229
>gi|228926225|ref|ZP_04089300.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228833478|gb|EEM79040.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 788
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229090130|ref|ZP_04221380.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
gi|228693207|gb|EEL46918.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-42]
Length = 788
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|170688095|ref|ZP_02879307.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0465]
gi|254682749|ref|ZP_05146610.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. CNEVA-9066]
gi|170667990|gb|EDT18741.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0465]
Length = 788
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|196037227|ref|ZP_03104538.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
cereus NVH0597-99]
gi|196031469|gb|EDX70065.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
cereus NVH0597-99]
Length = 788
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|167635355|ref|ZP_02393669.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0442]
gi|254740190|ref|ZP_05197882.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. Kruger B]
gi|167529183|gb|EDR91936.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0442]
Length = 788
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|30261191|ref|NP_843568.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. Ames]
gi|47777892|ref|YP_017700.2| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|30254805|gb|AAP25054.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. Ames]
gi|47551597|gb|AAT30175.2| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. 'Ames Ancestor']
Length = 583
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 481 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 537
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D +K +
Sbjct: 538 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKKAS 583
>gi|49184024|ref|YP_027276.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. Sterne]
gi|65318458|ref|ZP_00391417.1| COG2374: Predicted extracellular nuclease [Bacillus anthracis str.
A2012]
gi|165871845|ref|ZP_02216488.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0488]
gi|167640270|ref|ZP_02398536.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0193]
gi|170707621|ref|ZP_02898073.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0389]
gi|177654201|ref|ZP_02936174.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0174]
gi|190566721|ref|ZP_03019638.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
Tsiankovskii-I]
gi|227816075|ref|YP_002816084.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. CDC 684]
gi|229604339|ref|YP_002865620.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. A0248]
gi|254725540|ref|ZP_05187322.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. A1055]
gi|254734166|ref|ZP_05191879.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. Western North America USA6153]
gi|254753529|ref|ZP_05205565.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. Vollum]
gi|254758627|ref|ZP_05210654.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. Australia 94]
gi|49177951|gb|AAT53327.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. Sterne]
gi|164712422|gb|EDR17956.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0488]
gi|167511871|gb|EDR87251.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0193]
gi|170127396|gb|EDS96271.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0389]
gi|172080908|gb|EDT65988.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
str. A0174]
gi|190562273|gb|EDV16241.1| endonuclease/exonuclease/phosphatase family [Bacillus anthracis
Tsiankovskii-I]
gi|227003436|gb|ACP13179.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. CDC 684]
gi|229268747|gb|ACQ50384.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
anthracis str. A0248]
Length = 788
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTLEGTILKN-MLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229028860|ref|ZP_04184961.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
gi|228732431|gb|EEL83312.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus AH1271]
Length = 788
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKAL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|83815707|ref|YP_446788.1| endonuclease/exonuclease/phosphatase family protein, putative
[Salinibacter ruber DSM 13855]
gi|83757101|gb|ABC45214.1| endonuclease/exonuclease/phosphatase family protein, putative
[Salinibacter ruber DSM 13855]
Length = 320
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 36/128 (28%), Gaps = 22/128 (17%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINS------IGDTDDFWQKMDPDGLLIRFPQE 58
Q + + GIP ++ GDFN ++S G D Q + G +R
Sbjct: 184 QARVVNDLYRRLADRGIPTLLLGDFNSSLSSGEEGGQAGAEDATMQHI-LAGTDLRSAVN 242
Query: 59 KESTCNVIKRNK-----SSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
S ++D+ F Q R + S HC
Sbjct: 243 TASADTASATYPADAPARTIDHI---------FYPPQFFEAVDTQR-WCGRPAPPSDHCA 292
Query: 114 LTIEYDFE 121
+T
Sbjct: 293 VTAALRLP 300
>gi|222641774|gb|EEE69906.1| hypothetical protein OsJ_29747 [Oryza sativa Japonica Group]
Length = 1139
Score = 40.1 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 43/105 (40%), Gaps = 9/105 (8%)
Query: 14 DQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSL 73
D + + +P+++ GDFN + + K + +R ++ +C + L
Sbjct: 548 DIRQSSDLPWLVMGDFNEVLWQYEH----FSKRPRNESQMRAFRDALHSCELHDLGFRGL 603
Query: 74 DYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
+ D + + N++ V + + L S S HCP+ ++
Sbjct: 604 PH-TYDNKREGW---NNWRDV-FSNAQLSHLVSPCSDHCPIVLQL 643
>gi|77554244|gb|ABA97040.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1913
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 14/115 (12%)
Query: 13 ADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVI----KR 68
D K + +P++I GDFN + + +R ++ C ++
Sbjct: 724 LDLKQSSPLPWMIIGDFNETLWQFEH----FSVSKRGEAQMRAFRDVLQICELVDLGFSG 779
Query: 69 NKSSLDYFVIDRDNKNF-----LIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
+ D R N L DNS+ + Y S + S S HCP+ +++
Sbjct: 780 VPYTYDNRREGRSNVKVRLDRALADNSWRDI-YSNSQVVHLTSSCSDHCPILLKF 833
>gi|229818864|ref|YP_002880390.1| 5'-Nucleotidase domain protein [Beutenbergia cavernae DSM 12333]
gi|229564777|gb|ACQ78628.1| 5'-Nucleotidase domain protein [Beutenbergia cavernae DSM 12333]
Length = 1577
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 18/128 (14%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCN 64
Q L+ W Q + GDFN S G D D + + + +
Sbjct: 708 QATALRDWVGQVAAADDAVALLGDFN----SYGQEDPLHVLYDAGYTDVEAHFDVDGSSY 763
Query: 65 VIKRNKSSLDYFVIDRDNKN-------FLIDNSFSI-VSYDQSD------LDTRRSKLST 110
R SLD+ +++ + I++ ++ + Y + + D + S
Sbjct: 764 SFGRQSGSLDHVLLNAPALARATGADIWEINSGEAVALEYSRHNYHGTLFYDATAYRSSD 823
Query: 111 HCPLTIEY 118
H P+ +
Sbjct: 824 HDPVLVGL 831
>gi|116251927|ref|YP_767765.1| hypothetical protein RL2169 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256575|emb|CAK07661.1| hypothetical exported protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 417
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGD 38
L QQ L+KW ++K V+ GDFNR +
Sbjct: 244 LQQQVVPLEKWIERKSADTNRVVVLGDFNRNVWHETH 280
>gi|87119222|ref|ZP_01075120.1| hypothetical protein MED121_13170 [Marinomonas sp. MED121]
gi|86165613|gb|EAQ66880.1| hypothetical protein MED121_13170 [Marinomonas sp. MED121]
Length = 449
Score = 39.7 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 5 QGEWLKKWADQKI-KTGIPFVIAGDFN-RKINSIGDTDDFWQKMDPDGLLIR--FPQEKE 60
Q LK++ + K P ++AGDFN KIN + DF ++ +P
Sbjct: 319 QLAQLKRFIESKQIPYQEPVIMAGDFNVDKINYPQEHLDFLALLNATEPEATGAYPYSYA 378
Query: 61 STCNVI--KRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRS-KLSTHCPLTIE 117
N+ + LDY + D+ + +++ D +S LS H P+
Sbjct: 379 GPVNIYADEAFNEYLDYVLYSNDHIAPYASEN-KMLTPRSIDSQHWQSWDLSDHYPVEGR 437
Query: 118 YDFE 121
+ F
Sbjct: 438 FAFP 441
>gi|229160143|ref|ZP_04288144.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
gi|228623354|gb|EEK80179.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus R309803]
Length = 788
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNANAPVVVLGDMN-DFEFAKPLKAL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|241888840|ref|ZP_04776146.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379]
gi|241864516|gb|EER68892.1| lpxtg cell wall surface protein [Gemella haemolysans ATCC 10379]
Length = 866
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 53/121 (43%), Gaps = 11/121 (9%)
Query: 5 QGEWLKKWADQ--KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEK-ES 61
+ + L + + + + FV+ GDFN +D + + + + E+ +
Sbjct: 526 EAKILNAFIKEGLRQNPNLKFVLTGDFND----FEFSDSVKTIVGNELVNLMAEHEQGDR 581
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ + SLD +I ++ K+ ++ FS V + S ++ + S H P+ ++ DF
Sbjct: 582 YSYFYRGSNQSLDNVLISKNIKDKVV---FSPVHINASFMEEHG-RASDHDPVVVQIDFS 637
Query: 122 K 122
K
Sbjct: 638 K 638
>gi|229154750|ref|ZP_04282865.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
gi|228628698|gb|EEK85410.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus ATCC 4342]
Length = 788
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|229195383|ref|ZP_04322152.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
gi|228588082|gb|EEK46131.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus m1293]
Length = 788
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|47567552|ref|ZP_00238263.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
cereus G9241]
gi|47555747|gb|EAL14087.1| endonuclease/exonuclease/phosphatase family protein [Bacillus
cereus G9241]
Length = 788
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|329770281|ref|ZP_08261669.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325]
gi|328836839|gb|EGF86487.1| hypothetical protein HMPREF0433_01433 [Gemella sanguinis M325]
Length = 719
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 52/121 (42%), Gaps = 11/121 (9%)
Query: 5 QGEWLKKWADQ--KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQE-KES 61
Q + L + + + + FV+ GDFN +D + + + + E +
Sbjct: 524 QAKLLNAFVREGLRQNPNLKFVLTGDFND----FEFSDTVKTIVGNELVNLMAEHEAGDR 579
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ + SLD ++ ++ K+ ++ FS V + S ++ + S H P+ ++ DF
Sbjct: 580 YSYFYRGSNQSLDNILVSKNIKDRVL---FSPVHINASFMEEHG-RASDHDPVVVQIDFS 635
Query: 122 K 122
K
Sbjct: 636 K 636
>gi|330466241|ref|YP_004403984.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
AB-18-032]
gi|328809212|gb|AEB43384.1| endonuclease/exonuclease/phosphatase [Verrucosispora maris
AB-18-032]
Length = 650
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 20/119 (16%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCN 64
Q + ++A + G P V+AGDFN D + + GL+ F + +
Sbjct: 549 QARAVAEFATEYAD-GRPLVVAGDFN-----TEPGDPAFTALTDAGLVDAFAAVRPLPTS 602
Query: 65 VIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKG 123
++ +D+ F+ + +D S S H P+ + G
Sbjct: 603 PADDPRTQIDHI--------FVSPD------LPTTDPVAIASTASDHLPVAVTLKLPPG 647
>gi|228984258|ref|ZP_04144440.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228775545|gb|EEM23929.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 788
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGTNLKNMLNAVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|325510164|gb|ADZ21800.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
Length = 374
Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 14/130 (10%)
Query: 6 GEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDT-----------DDFWQKMDPDGLLIR 54
E L + ++ G ++ GD N + D D W K+D +G+
Sbjct: 104 IEQLAAYINE-NSKGNAVIVMGDTNTRYTRQQDNIKQALVDACNLKDAWVKLDRNGVYPS 162
Query: 55 FPQEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPL 114
+ N N +D + L ++ S D +D +LS H P+
Sbjct: 163 TGEPLMDETNRNSANFEVVDKILF--RGSKSLTLDALSYRLEDTKFVDKSGKQLSDHYPI 220
Query: 115 TIEYDFEKGN 124
++++ K N
Sbjct: 221 IAQFNYTKTN 230
>gi|222616232|gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
Length = 1102
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 14/106 (13%)
Query: 16 KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDY 75
+ + +P+++ GDFN + + G + +++ NV R LD
Sbjct: 559 RNSSNLPWLVIGDFNEALWQFEHFSSHPRGEPQMGTPFTYDNKRQGRNNVRVR----LDR 614
Query: 76 FVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ D ++ ++ + L S S HCP++++ E
Sbjct: 615 AIADNAWRD----------TFPNATLAHLASPRSDHCPISLQLSQE 650
>gi|222094804|ref|YP_002528864.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1]
gi|221238862|gb|ACM11572.1| endonuclease/exonuclease/phosphatase [Bacillus cereus Q1]
Length = 788
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPLHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|206976594|ref|ZP_03237500.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
H3081.97]
gi|206745277|gb|EDZ56678.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
H3081.97]
Length = 788
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPLHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|217958656|ref|YP_002337204.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187]
gi|229137866|ref|ZP_04266465.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
gi|217063925|gb|ACJ78175.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus AH187]
gi|228645523|gb|EEL01756.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus BDRD-ST26]
Length = 788
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPLHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|255590873|ref|XP_002535386.1| conserved hypothetical protein [Ricinus communis]
gi|223523279|gb|EEF26997.1| conserved hypothetical protein [Ricinus communis]
Length = 249
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 16/127 (12%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN--RKI------NSIGDTDDFWQKMDPDGLLIRF 55
+Q + L + G P VIAGDFN R N++G + F + + L
Sbjct: 128 RQTQALIAAVKESAPNGEPVVIAGDFNDWRNTLSAELYNALGVVEAFDEIEGSNTALGEI 187
Query: 56 PQE--KESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
++ ++S+ + ++L +F +DR ++ ++ + +KLS H P
Sbjct: 188 MRKLRRKSSIVPARTFPAALPFFRLDRIYVRGFKVDTAEVM------HGSLWAKLSDHAP 241
Query: 114 LTIEYDF 120
+
Sbjct: 242 IVASLTL 248
>gi|269104284|ref|ZP_06156980.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268160924|gb|EEZ39421.1| metal-dependent hydrolase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 296
Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 46/114 (40%), Gaps = 23/114 (20%)
Query: 16 KIKTGIPFVIAGDFNRKINSIGDTDD-------FWQKMDPDGLLIRFPQEKESTCNVIKR 68
+I+ +++ GDFN + + + F++++ ++ + +C +
Sbjct: 186 RIENNHSYILLGDFNYPLYTSLNNKKEKQHNHWFFKQLGIPTTALK-QHKTSFSCQIKIH 244
Query: 69 --------NKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPL 114
+D+ + D+ N + L +Y ++ + ++LS HCPL
Sbjct: 245 HKKSRLITYTQPIDHVISDKINISKLE-------TYQYTNKEMSSNQLSDHCPL 291
>gi|301052723|ref|YP_003790934.1| endonuclease/exonuclease/phosphatase [Bacillus anthracis CI]
gi|300374892|gb|ADK03796.1| endonuclease/exonuclease/phosphatase [Bacillus cereus biovar
anthracis str. CI]
Length = 788
Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|49479799|ref|YP_035327.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|49331355|gb|AAT62001.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 788
Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|311899750|dbj|BAJ32158.1| putative exodeoxyribonuclease III [Kitasatospora setae KM-6054]
Length = 270
Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 39/133 (29%), Gaps = 18/133 (13%)
Query: 6 GEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTD-----DFWQKMDPDGLLIRFPQEKE 60
L+ G PF + GDFN D P+ + +E
Sbjct: 138 MAALRDAVRDDAAGGRPFAVLGDFNVAPTDEDVYDLAAFAGLTHVTAPERATLAALRELG 197
Query: 61 STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSI-VSYDQS-----------DLDTRRSK- 107
V + K Y D F + I ++Y D + R+ K
Sbjct: 198 LRDVVPRPLKYDRPYTFWDYRALAFPKNRGMRIDLTYANEPFADAVTDTYVDREARKGKG 257
Query: 108 LSTHCPLTIEYDF 120
S H P+ ++ D
Sbjct: 258 TSDHAPVVVDLDL 270
>gi|296129478|ref|YP_003636728.1| 5'-Nucleotidase domain protein [Cellulomonas flavigena DSM 20109]
gi|296021293|gb|ADG74529.1| 5'-Nucleotidase domain protein [Cellulomonas flavigena DSM 20109]
Length = 1652
Score = 38.5 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 37/129 (28%), Gaps = 18/129 (13%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q L+ W + GDFN + D D +
Sbjct: 690 RQATALRDWVPTVQGDVEAVALVGDFN----AYTREDPLQVLYDAGYVDAVETLAPGQWS 745
Query: 64 NVIKRNKSSLDYFVIDRDNKN-------FLIDNSFSI-VSYDQSDL------DTRRSKLS 109
SLD+ +++ + + I+ S+ + Y + + + S
Sbjct: 746 YSFSGLSGSLDHVLLNEAARARATGADVWEINAEESVALEYSRYNYHGSLFHADDPYRSS 805
Query: 110 THCPLTIEY 118
H P+ +
Sbjct: 806 DHDPVLVGL 814
>gi|163737422|ref|ZP_02144839.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis
BS107]
gi|161388948|gb|EDQ13300.1| Endonuclease/exonuclease/phosphatase [Phaeobacter gallaeciensis
BS107]
Length = 331
Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 56/142 (39%), Gaps = 30/142 (21%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGD-------------FNRKINSIGDTDDFWQKMDPDGL 51
Q WL++ +Q + G+ V+ GD FNR I D + DP+
Sbjct: 193 QAIWLRRRVEQLLAEGLDVVVMGDLNDGPGLDQYEQLFNRSSVEIAMESDLY---DPNAQ 249
Query: 52 LIRFPQEKESTC------NVIKRN-KSSLDYFV----IDRDNKNFLIDNSFSIVSYDQSD 100
+ P+ + KR + LDY + + + N+ I + F + + D
Sbjct: 250 SLLQPRLRVMPSSARFYDKANKRYFSALLDYIMVSSGLRQPAANWRIWHPFEDAACYE-D 308
Query: 101 LDTRRSKL--STHCPLTIEYDF 120
+ R + L S H P++++ D
Sbjct: 309 VALREALLAASDHFPVSLDLDL 330
>gi|228964133|ref|ZP_04125257.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228795567|gb|EEM43050.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar sotto str. T04001]
Length = 129
Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 8/123 (6%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKES 61
L+Q+ + QK T P V+ GD N + + +L P+E
Sbjct: 15 LAQEVNQFVQGI-QKKNTNAPVVVLGDMN-DFEFAKPLKAL-EGTNLKNMLNTVPKENRY 71
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
T + + N LD+ ++ + + ++ + S++ ++S H P+ + D +
Sbjct: 72 T-YIHEGNAQVLDHILVTNN----IAPHTIVDPVHLNSNIMKEHGRVSDHDPVLAQIDLK 126
Query: 122 KGN 124
K +
Sbjct: 127 KAS 129
>gi|108864566|gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1469
Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 14/106 (13%)
Query: 16 KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDY 75
+ + +P+++ GDFN + + G + +++ NV R LD
Sbjct: 552 RNSSNLPWLVIGDFNEALWQFEHFSSHPRGEPQMGTPFTYDNKRQGRNNVRVR----LDR 607
Query: 76 FVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ D ++ ++ + L S S HCP++++ E
Sbjct: 608 AIADNAWRD----------TFPNATLAHLASPRSDHCPISLQLSQE 643
>gi|115372829|ref|ZP_01460134.1| putative hemagglutinin-related protein [Stigmatella aurantiaca
DW4/3-1]
gi|310818499|ref|YP_003950857.1| endonuclease/exonuclease/phosphatase domain-containing protein
[Stigmatella aurantiaca DW4/3-1]
gi|115370096|gb|EAU69026.1| putative hemagglutinin-related protein [Stigmatella aurantiaca
DW4/3-1]
gi|309391571|gb|ADO69030.1| Endonuclease/exonuclease/phosphatase domain protein [Stigmatella
aurantiaca DW4/3-1]
Length = 526
Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 43/123 (34%), Gaps = 12/123 (9%)
Query: 6 GEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE----- 60
G LK++ D + + ++ GD+N ++ D P + P +
Sbjct: 403 GAALKQYLDS-QLSNVRVIVLGDWNDDVDISIYRDSGSYLPSPYQNFVEAPASYQFLTMP 461
Query: 61 ---STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIE 117
S + +D+ +I + + NS ++ + + S H P+
Sbjct: 462 LSVSGVGSTVGYSTFIDHQLISNELFGDYVGNSTQVLYPA---IPNYANTTSDHYPIQSR 518
Query: 118 YDF 120
+DF
Sbjct: 519 FDF 521
>gi|283779137|ref|YP_003369892.1| endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
gi|283437590|gb|ADB16032.1| Endonuclease/exonuclease/phosphatase [Pirellula staleyi DSM 6068]
Length = 307
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 19/125 (15%)
Query: 13 ADQKIKT---GIPFVIAGDFNRKINSIGDTDDF--------WQKMDPDGLLIRFPQEKES 61
+++K +P V+ GDFN ++ S + W+ +D G+ + P +
Sbjct: 188 IARRLKELAADLPVVLVGDFNARLASDPIQNVLAKPDSASDWRLVDAQGVSAKKPTGPTA 247
Query: 62 TCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSK-LSTHCPLTIEYDF 120
T N K + +F+ F ++ + + T + +S H P+ +F
Sbjct: 248 TFNGFKAIPE-------GDNKIDFIFVRDFVVLDHVVENPLTPAGRFVSDHLPVIANIEF 300
Query: 121 EKGNV 125
K +V
Sbjct: 301 PKESV 305
>gi|217965584|ref|YP_002351262.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes HCC23]
gi|217334854|gb|ACK40648.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes HCC23]
gi|307569865|emb|CAR83044.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes L99]
Length = 256
Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 4/102 (3%)
Query: 18 KTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDYFV 77
P ++ GDFN + N+ +K L+ + P + + C +
Sbjct: 157 AENSPVIVLGDFNTQPNTPTYN-YITEKYQDAQLISQKPAKGPTGCFHDFHPLRPENEL- 214
Query: 78 IDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+ N F + +Y+ + S H P+T D
Sbjct: 215 --EKIDYIFVSNEFQVNTYETIVDEVDGFSASDHFPVTANLD 254
>gi|312794993|ref|YP_004027915.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia
rhizoxinica HKI 454]
gi|312166768|emb|CBW73771.1| Endonuclease/Exonuclease/phosphatase family protein [Burkholderia
rhizoxinica HKI 454]
Length = 301
Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 20/119 (16%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ TG P V+AGDFN N D++ + ++ +E ST
Sbjct: 196 RQMHWIAHWIAREAATG-PLVLAGDFNDWKN---DSEPLFAEIG--------LREVASTL 243
Query: 64 -NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
K + +D+ + + R + LS H P +
Sbjct: 244 GEAGKTFPAFSPALALDKMFVRGVTPVQWLE-------PAPRTAWLSDHLPYMARLRLD 295
>gi|289208245|ref|YP_003460311.1| endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
gi|288943876|gb|ADC71575.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
Length = 554
Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCN 64
Q E L +W +Q+ + G+P +IAGD +N+ D + + + ++
Sbjct: 434 QAERLAQWIEQERRDGLPVIIAGD----LNAYAAEDPLRLLREAGKRDLVHAEPDQAYSY 489
Query: 65 VIKRNKSSLDYFVIDRD-------NKNFLID-NSFSIVSYDQSDLDTRRSKLSTHCPLTI 116
V + LDY + RD ++ I+ + + + +D S + S H P+ +
Sbjct: 490 VFRGQSGQLDYLLGPRDLEERVGKAGSWAINADEPAFLGFDGSQPAEGPWRASDHDPVWL 549
Query: 117 EYD 119
+
Sbjct: 550 DLQ 552
>gi|228990178|ref|ZP_04150148.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
12442]
gi|228769541|gb|EEM18134.1| Endonuclease/exonuclease/phosphatase [Bacillus pseudomycoides DSM
12442]
Length = 788
Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK P VI GD N + D ++ ++ + N LD
Sbjct: 686 QKRDVNAPVVIVGDMN-DFEFSKPLQALKAENMQD--MLETVSKENRYTYIHDGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTVVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|228996264|ref|ZP_04155909.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
gi|229003931|ref|ZP_04161737.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
gi|228757300|gb|EEM06539.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock1-4]
gi|228763456|gb|EEM12358.1| Endonuclease/exonuclease/phosphatase [Bacillus mycoides Rock3-17]
Length = 788
Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK P VI GD N + D ++ ++ + N LD
Sbjct: 686 QKRDVNAPVVIVGDMN-DFEFSKPLQALKAENMQD--MLETVSKENRYTYIHDGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNN----IAPHTVVDPVHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|297190955|ref|ZP_06908353.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486]
gi|197721867|gb|EDY65775.1| exonuclease [Streptomyces pristinaespiralis ATCC 25486]
Length = 259
Score = 37.8 bits (86), Expect = 0.49, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 44/145 (30%), Gaps = 38/145 (26%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+ E L G PF + GDFN DD W DG+ P E+ +
Sbjct: 125 RWLEALSVAVTDDAAAGRPFAVLGDFN----IAPTDDDVWDPSFFDGMTHVTPPERAALE 180
Query: 64 NVIKRN-----KSSLDY-----------------------FVIDRDNKNFLIDNSFSIVS 95
+ KR L Y V + + +SF
Sbjct: 181 ALRKRGLADVVPRPLKYEHPFTYWDYRQLCFPKNRGMRIDLVYGNEPFTAAVKDSF---- 236
Query: 96 YDQSDLDTRRSKLSTHCPLTIEYDF 120
D+ + + + S H P+ ++ D
Sbjct: 237 VDREERKGKGA--SDHAPVVVDLDM 259
>gi|228913758|ref|ZP_04077383.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228845697|gb|EEM90723.1| Endonuclease/exonuclease/phosphatase [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 190
Score = 37.8 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 88 QKKNTNAPVVVLGDMN-DFEFAKPLKTL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 144
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D +K +
Sbjct: 145 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKKAS 190
>gi|182414371|ref|YP_001819437.1| endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
gi|177841585|gb|ACB75837.1| Endonuclease/exonuclease/phosphatase [Opitutus terrae PB90-1]
Length = 257
Score = 37.8 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 21/123 (17%)
Query: 4 QQGEWLKKWADQKIKTG-----IPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQE 58
+Q L W +K + +P ++ GD N S T + G + P +
Sbjct: 151 RQIGRLLAWLREKQEHSRGRWRVPAIVCGDLNNPGTSADATAALLSHLSDYGEYVLHPTK 210
Query: 59 KESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
+ S L ++D F + + S + R LS H P+ +++
Sbjct: 211 GRT-------FPSPLPGRLLDF---------VFLPGACNASHCEIVRCFLSDHRPVAVDF 254
Query: 119 DFE 121
Sbjct: 255 TLP 257
>gi|196044355|ref|ZP_03111591.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
03BB108]
gi|196024994|gb|EDX63665.1| endonuclease/exonuclease/phosphatase family [Bacillus cereus
03BB108]
Length = 788
Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKAL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + + + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNNIAPYTSVDP----VHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|118476676|ref|YP_893827.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str.
Al Hakam]
gi|118415901|gb|ABK84320.1| endonuclease/exonuclease/phosphatase [Bacillus thuringiensis str.
Al Hakam]
Length = 788
Score = 37.4 bits (85), Expect = 0.62, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK T P V+ GD N + + +L P+E T + + N LD
Sbjct: 686 QKKNTNAPVVVLGDMN-DFEFAKPLKAL-EGTNLKNMLNTVPKENRYT-YIHEGNAQVLD 742
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + + + S++ ++S H P+ + D +K +
Sbjct: 743 HILVTNNIAPYTSVDP----VHLNSNIMKEHGRVSDHDPVLAQIDLKKAS 788
>gi|289580690|ref|YP_003479156.1| endonuclease/exonuclease/phosphatase [Natrialba magadii ATCC 43099]
gi|289530243|gb|ADD04594.1| Endonuclease/exonuclease/phosphatase [Natrialba magadii ATCC 43099]
Length = 261
Score = 37.4 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 42/116 (36%), Gaps = 17/116 (14%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q L + G V+ GDFN + TD+ + D L ++ P E
Sbjct: 162 RQLAELATLIRDRAG-GREVVVTGDFN----TFAATDELHEFTDQAALELQVPGETVPA- 215
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+ D+ V R F S + D D+ +LS H P+ +E D
Sbjct: 216 ------RPFDDWLVGSRSLDLFCCSPSLDVGRCDVLDV-----QLSDHRPIVLELD 260
>gi|327287974|ref|XP_003228703.1| PREDICTED: deoxyribonuclease-1-like 2-like [Anolis carolinensis]
Length = 277
Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 11/101 (10%)
Query: 24 VIAGDFNRKINSIGDTDDFWQKMDPDGLLI---RFPQEKESTCNVIKRNKSSLDYFVI-D 79
+ GDFN + +G D W + + P E+++T + + + D V+
Sbjct: 179 MFLGDFNADCSYVGKKD--WASIRLRTSEVFKWLIPDEEDTT---VGHSDCAYDRIVVSG 233
Query: 80 RDNKNFLIDNSFSIVSYDQSDLDTRRSKL--STHCPLTIEY 118
K ++ NS + + + ++ L S H P+ +
Sbjct: 234 AQMKKWVKPNSAKVFDFQEEFKLSQEKALAVSDHFPVEVTL 274
>gi|308209127|gb|ADO20908.1| exodeoxyribonuclease-2 [Saccharopolyspora spinosa]
Length = 266
Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 18/136 (13%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTD-----DFWQKMDPDGLLIRFPQE 58
+ + L+ +++ PF + GDFN D D +G + +
Sbjct: 131 RWLDALRATVIEEMAADRPFAVLGDFNICPTDADVWDIAGFADSTHVRKNEGKALAALAK 190
Query: 59 KESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSI------------VSYDQSDLDTRRS 106
+ K + + D F + I V+ D + R+
Sbjct: 191 PGLARVYRRAMKYDIPFTYWDYRALRFPNNQGMRIDLVYGNEKFTGAVTDSYVDREARKG 250
Query: 107 K-LSTHCPLTIEYDFE 121
K S H P+ ++ D
Sbjct: 251 KGTSDHAPVVVDLDVP 266
>gi|167909082|ref|ZP_02496173.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 112]
Length = 270
Score = 37.0 bits (84), Expect = 0.78, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ +TG P V+AGDFN N D+ + ++ + + +
Sbjct: 169 RQMHWIAHWIERNARTG-PLVLAGDFNDWRN---DSIPLFGEIGLSEVATLLGESGRT-- 222
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + + + LS H P +
Sbjct: 223 -----FPAFSPALALDKMFVRGMTPLEWRAPGDET-------AWLSDHLPYVARLRLD 268
>gi|167917123|ref|ZP_02504214.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei BCC215]
Length = 270
Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ +TG P V+AGDFN N D+ + ++ + + +
Sbjct: 169 RQMHWIAHWIERNARTG-PLVLAGDFNDWRN---DSIPLFGEIGLSEVATLLGESGRT-- 222
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + + + LS H P +
Sbjct: 223 -----FPAFSPALALDKMFVRGMTPLEWRAPGDET-------AWLSDHLPYVARLRLD 268
>gi|53717884|ref|YP_106870.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei K96243]
gi|67641509|ref|ZP_00440286.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei GB8 horse 4]
gi|76810950|ref|YP_331843.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 1710b]
gi|121598216|ref|YP_994254.1| hypothetical protein BMASAVP1_A2960 [Burkholderia mallei SAVP1]
gi|124384970|ref|YP_001028092.1| hypothetical protein BMA10229_A2128 [Burkholderia mallei NCTC
10229]
gi|126442096|ref|YP_001057288.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 668]
gi|126450081|ref|YP_001082902.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei NCTC 10247]
gi|126454198|ref|YP_001064530.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 1106a]
gi|134283629|ref|ZP_01770328.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 305]
gi|167001495|ref|ZP_02267290.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei PRL-20]
gi|167736660|ref|ZP_02409434.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 14]
gi|167813758|ref|ZP_02445438.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 91]
gi|167843867|ref|ZP_02469375.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei B7210]
gi|167892369|ref|ZP_02479771.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 7894]
gi|167900865|ref|ZP_02488070.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei NCTC 13177]
gi|217424902|ref|ZP_03456398.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 576]
gi|226199751|ref|ZP_03795302.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei Pakistan 9]
gi|237810425|ref|YP_002894876.1| endonuclease/exonuclease/phosphatase [Burkholderia pseudomallei
MSHR346]
gi|242317588|ref|ZP_04816604.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 1106b]
gi|254174690|ref|ZP_04881351.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei ATCC 10399]
gi|254182171|ref|ZP_04888768.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 1655]
gi|254188101|ref|ZP_04894613.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|254196318|ref|ZP_04902742.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei S13]
gi|254201867|ref|ZP_04908231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei FMH]
gi|254207198|ref|ZP_04913549.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei JHU]
gi|254260281|ref|ZP_04951335.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 1710a]
gi|254295783|ref|ZP_04963240.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 406e]
gi|254359702|ref|ZP_04975973.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei 2002721280]
gi|52208298|emb|CAH34231.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei K96243]
gi|76580403|gb|ABA49878.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 1710b]
gi|121227026|gb|ABM49544.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
gi|124292990|gb|ABN02259.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
gi|126221589|gb|ABN85095.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 668]
gi|126227840|gb|ABN91380.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 1106a]
gi|126242951|gb|ABO06044.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei NCTC 10247]
gi|134245038|gb|EBA45133.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 305]
gi|147747761|gb|EDK54837.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei FMH]
gi|147752740|gb|EDK59806.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei JHU]
gi|148028916|gb|EDK86848.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei 2002721280]
gi|157806316|gb|EDO83486.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 406e]
gi|157935781|gb|EDO91451.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei Pasteur 52237]
gi|160695735|gb|EDP85705.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei ATCC 10399]
gi|169653061|gb|EDS85754.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei S13]
gi|184212709|gb|EDU09752.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 1655]
gi|217391922|gb|EEC31948.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 576]
gi|225928102|gb|EEH24138.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei Pakistan 9]
gi|237506100|gb|ACQ98418.1| endonuclease/exonuclease/phosphatase [Burkholderia pseudomallei
MSHR346]
gi|238522453|gb|EEP85897.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei GB8 horse 4]
gi|242140827|gb|EES27229.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 1106b]
gi|243062702|gb|EES44888.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
mallei PRL-20]
gi|254218970|gb|EET08354.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
pseudomallei 1710a]
Length = 270
Score = 37.0 bits (84), Expect = 0.80, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ +TG P V+AGDFN N D+ + ++ + + +
Sbjct: 169 RQMHWIAHWIERNARTG-PLVLAGDFNDWRN---DSIPLFGEIGLSEVATLLGESGRT-- 222
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + + + LS H P +
Sbjct: 223 -----FPAFSPALALDKMFVRGMTPLEWRAPGDET-------AWLSDHLPYVARLRLD 268
>gi|167822275|ref|ZP_02453746.1| hypothetical protein Bpseu9_01274 [Burkholderia pseudomallei 9]
Length = 120
Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ +TG P V+AGDFN N D+ + ++ + + +
Sbjct: 19 RQMHWIAHWIERNARTG-PLVLAGDFNDWRN---DSIPLFGEIGLSEVATLLGESGRT-- 72
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + + + LS H P +
Sbjct: 73 -----FPAFSPALALDKMFVRGMTPLEWRAPGDET-------AWLSDHLPYVARLRLD 118
>gi|114321996|ref|YP_743679.1| endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228390|gb|ABI58189.1| Endonuclease/exonuclease/phosphatase [Alkalilimnicola ehrlichii
MLHE-1]
Length = 276
Score = 37.0 bits (84), Expect = 0.82, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 29/121 (23%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTD--DFWQKMDPDGLLIRFPQEKEST 62
Q +L ++ ++ GDFN S T D + ++P L FP
Sbjct: 178 QLAYLADLINEHRH----VIVMGDFNCHSRSPEFTTLVDRTELLEPVHDLHTFPS----- 228
Query: 63 CNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEK 122
+ + ++D+ ++ +S + D LS H P+T++ +
Sbjct: 229 ----WKPQRNIDHILL---------SSSLEVGHVRVLDYP-----LSDHLPITMDISLPE 270
Query: 123 G 123
G
Sbjct: 271 G 271
>gi|53724878|ref|YP_104766.1| hypothetical protein BMA3294 [Burkholderia mallei ATCC 23344]
gi|52428301|gb|AAU48894.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
Length = 230
Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ +TG P V+AGDFN N D+ + ++ + + +
Sbjct: 129 RQMHWIAHWIERNARTG-PLVLAGDFNDWRN---DSIPLFGEIGLSEVATLLGESGRT-- 182
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + + + LS H P +
Sbjct: 183 -----FPAFSPALALDKMFVRGMTPLEWRAPGDET-------AWLSDHLPYVARLRLD 228
>gi|33598562|ref|NP_886205.1| putative endonuclease [Bordetella parapertussis 12822]
gi|33603508|ref|NP_891068.1| putative endonuclease [Bordetella bronchiseptica RB50]
gi|33574691|emb|CAE39344.1| putative endonuclease [Bordetella parapertussis]
gi|33577632|emb|CAE34897.1| putative endonuclease [Bordetella bronchiseptica RB50]
Length = 262
Score = 37.0 bits (84), Expect = 0.87, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 47/140 (33%), Gaps = 25/140 (17%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
L Q G WL + KTG FVI GD+N I W+ + + E+
Sbjct: 126 FLDQFGPWLDGLMAEHRKTGREFVICGDWN--IAHKEIDLKNWKGNQKNSGFL---PEER 180
Query: 61 STCNVIKRNKSSLDYF-VIDRDNKN----------------FLIDNSFSIVSYDQSDLDT 103
+ + + +D F +D + ID + + T
Sbjct: 181 AWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARAT 240
Query: 104 RRS---KLSTHCPLTIEYDF 120
+ S H PLT++YD
Sbjct: 241 SIYKDERFSDHAPLTVDYDI 260
>gi|33591597|ref|NP_879241.1| putative endonuclease [Bordetella pertussis Tohama I]
gi|33571240|emb|CAE44701.1| putative endonuclease [Bordetella pertussis Tohama I]
gi|332380997|gb|AEE65844.1| putative endonuclease [Bordetella pertussis CS]
Length = 262
Score = 37.0 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 47/140 (33%), Gaps = 25/140 (17%)
Query: 1 MLSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
L Q G WL + KTG FVI GD+N I W+ + + E+
Sbjct: 126 FLDQFGPWLDGLMAEHRKTGREFVICGDWN--IAHKEIDLKNWKGNQKNSGFL---PEER 180
Query: 61 STCNVIKRNKSSLDYF-VIDRDNKN----------------FLIDNSFSIVSYDQSDLDT 103
+ + + +D F +D + ID + + T
Sbjct: 181 AWLTEVFDRRGFVDVFRKLDERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARAT 240
Query: 104 RRS---KLSTHCPLTIEYDF 120
+ S H PLT++YD
Sbjct: 241 SIYKDERFSDHAPLTVDYDI 260
>gi|329906029|ref|ZP_08274330.1| Endonuclease/exonuclease/phosphatase [Oxalobacteraceae bacterium
IMCC9480]
gi|327547361|gb|EGF32191.1| Endonuclease/exonuclease/phosphatase [Oxalobacteraceae bacterium
IMCC9480]
Length = 264
Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 16/127 (12%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDT-------DDFWQKMDPD---GLLI 53
+Q E L + G P +IAGDFN N + + + + + P G +
Sbjct: 143 RQAEALIEAVLDSAPPGAPVIIAGDFNDWGNHLSEALRSRLGVTEVFDERVPSVGMGSFL 202
Query: 54 RFPQEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
R + ++ + + L + +DR +S ++ ++LS H P
Sbjct: 203 RRLRGPDAKIQPARTFPAMLPFLQLDRIYVRGFAIDSAEVL------HGALWARLSDHAP 256
Query: 114 LTIEYDF 120
+
Sbjct: 257 IVATLQL 263
>gi|300769904|ref|ZP_07079783.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300762380|gb|EFK59197.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 326
Score = 37.0 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 44/110 (40%), Gaps = 13/110 (11%)
Query: 24 VIAGDFNRKINSIGDTD----------DFWQKMDPDGLLIRF-PQEKESTCNVIKRNKSS 72
++ GDFN + D D W ++ G++ P I+++K S
Sbjct: 217 LLMGDFNAHYSFELDNVRNFIKETRMIDTWVYLENKGIVPHIDPMYSAGDILAIRKDKES 276
Query: 73 LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEK 122
+D + I S++I + +D LS HC +++ + +E+
Sbjct: 277 IDKIMFRNSADLHFIPESYAIENRLFTD--KSGLPLSDHCAVSLSFSWER 324
>gi|167561163|ref|ZP_02354079.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
oklahomensis EO147]
gi|167568380|ref|ZP_02361254.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
oklahomensis C6786]
Length = 268
Score = 37.0 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ TG P V+AGDFN N D+ + ++ + +
Sbjct: 169 RQMSWIAHWIERHASTG-PLVLAGDFNDWRN---DSIPLFGEIGLSEVATLLGASGRT-- 222
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + + LS H P +
Sbjct: 223 -----FPAFSPALALDKMFVRGMTP-------IEWRAPGDETAWLSDHLPYVARLRLD 268
>gi|125579657|gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group]
Length = 787
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 14/110 (12%)
Query: 16 KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVI----KRNKS 71
+ + +P+++ GDFN + + + ++ ++ TC++
Sbjct: 9 RQFSNLPWLVLGDFNEALWQFEH----FSVRQRNETQMQSFRDVLQTCDLHALGFSGVPY 64
Query: 72 SLDYFVIDRDNKNF-----LIDNSFSIVSYDQSDLDTRRSKLSTHCPLTI 116
+ D R+N L DN + + + + + S S HCP+++
Sbjct: 65 TYDNRREGRNNIRVRLDRALADNDWREM-FGNARVSHLTSTRSDHCPISV 113
>gi|88813281|ref|ZP_01128520.1| hypothetical protein NB231_07277 [Nitrococcus mobilis Nb-231]
gi|88789453|gb|EAR20581.1| hypothetical protein NB231_07277 [Nitrococcus mobilis Nb-231]
Length = 556
Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 17/133 (12%), Positives = 38/133 (28%), Gaps = 28/133 (21%)
Query: 4 QQGEWLKKWADQKIK--TGIPFVIAGDFN--------RKINSIGDTDDFWQKMDPDGLLI 53
+Q L +W + F++ GD N + + S G D +++ P
Sbjct: 433 RQAAALSQWLKRLQAAVDQPRFLLMGDLNSYPGEAAVQTLLSAGLRDLIAERVAPADRYT 492
Query: 54 RFPQEKESTCNVIKRNKSSLDYFV--------IDRDNKNFLIDNSFSIVSYDQSDLDTRR 105
LD+ + + + + + + Y
Sbjct: 493 YVYHG----------YAGYLDHALATVALADAVGQVAIWHINADEPRYLGYTNPRAKPTF 542
Query: 106 SKLSTHCPLTIEY 118
+ S H P+ ++
Sbjct: 543 YRSSDHDPVVVDL 555
>gi|255025182|ref|ZP_05297168.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes FSL J2-003]
Length = 256
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 18/109 (16%)
Query: 18 KTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNK------- 70
P +I GDFN + N+ + + D LI K T + +
Sbjct: 157 AENSPVIILGDFNTQPNTPTYN--YITEKYQDAQLISQKPAKGPTGSFHDFHPLRPENEL 214
Query: 71 SSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+DY + N F + +Y+ + S H P+T D
Sbjct: 215 EKIDYI---------FVSNEFQVSTYETIVDEVDGFSASDHFPVTANLD 254
>gi|301167117|emb|CBW26696.1| hypothetical protein BMS_1876 [Bacteriovorax marinus SJ]
Length = 254
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 45/131 (34%), Gaps = 24/131 (18%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCN 64
Q ++LK K +VI GDFN +++ K D LI E + +
Sbjct: 130 QLKYLKSQLSPKNA----YVIMGDFN-TTQYFHSEGNYFHKFIRDAKLIASSSEIDCSSY 184
Query: 65 VIKR------NKSSLDYFV-----------IDRDNKNFLIDNSFSIVSYDQSDLDTRRSK 107
S LD+ + ID N N+ I S + L +
Sbjct: 185 WWGGINDGLYYPSLLDHILVTKELVGNFNRIDFTNTEHCAQNTCQIASLQE--LGQSYNS 242
Query: 108 LSTHCPLTIEY 118
+S HCP+ E
Sbjct: 243 VSDHCPIRAEL 253
>gi|167717617|ref|ZP_02400853.1| hypothetical protein BpseD_01281 [Burkholderia pseudomallei DM98]
Length = 114
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 40/118 (33%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ +TG P V+AGDFN N D+ + ++ + + +
Sbjct: 13 RQMHWIAHWIERNARTG-PLVLAGDFNDWRN---DSIPLFGEIGLSEVATLLGESGRT-- 66
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + + + LS H P +
Sbjct: 67 -----FPAFSPALALDKMFVRGMTPLEWRAPGDET-------AWLSDHLPYVARLRLD 112
>gi|163740897|ref|ZP_02148290.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
gallaeciensis 2.10]
gi|161385888|gb|EDQ10264.1| endonuclease/exonuclease/phosphatase family protein [Phaeobacter
gallaeciensis 2.10]
Length = 339
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 30/142 (21%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGD-------------FNRKINSIGDTDDFWQKMDPDGL 51
Q WL++ +Q + G ++ GD FNR I D + DP+
Sbjct: 201 QAIWLRRRVEQLLAEGRDVMVMGDLNDGPGLDQYEQLFNRSSVEIVMESDLY---DPNAQ 257
Query: 52 LIRFPQEKESTC------NVIKRN-KSSLDYFV----IDRDNKNFLIDNSFSIVSYDQSD 100
+ P+ + KR + LDY + + + ++ I + F + + D
Sbjct: 258 SLLQPRLRVMPSSARFYDKANKRYFSALLDYIMVSSGLRQPAASWRIWHPFEDAACYE-D 316
Query: 101 LDTRRSKL--STHCPLTIEYDF 120
+ R + L S H P++++ D
Sbjct: 317 VALREALLAASDHFPVSLDLDL 338
>gi|290242949|ref|YP_003494619.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
gi|288945454|gb|ADC73152.1| Endonuclease/exonuclease/phosphatase [Thioalkalivibrio sp. K90mix]
Length = 361
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 6/120 (5%)
Query: 2 LSQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDP--DGLLIRFPQEK 59
L + +WL + I F GDFN + G +P
Sbjct: 166 LRRYWDWLADVMPEYAGERILF---GDFNLPPHHDG-WASMRAVAEPLVTEGATTLSTHD 221
Query: 60 ESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
N+ D+ + D S V+ D + R ++S H P+ + ++
Sbjct: 222 RRYANLYDNLWVPKDHTLPLGDAGILPFPVVLSEVTGVYWDHEKARDRVSDHAPVYVLFE 281
>gi|288942589|ref|YP_003444829.1| endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM
180]
gi|288897961|gb|ADC63797.1| Endonuclease/exonuclease/phosphatase [Allochromatium vinosum DSM
180]
Length = 255
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 26/111 (23%)
Query: 16 KIKTGIPFVI-AGDFNRKINSIGDTDDFWQ--KMDPDGLLIRFPQEKESTCNVIKRNKSS 72
++ P+++ GDFN NS G + + D L FP R + +
Sbjct: 160 RLAQTYPYLVLMGDFNCGCNSKGLRNMVRRSGMRGLDCELKTFPS---------WRPRHN 210
Query: 73 LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKG 123
LD+ L+ +V+ D LS H P+++ + G
Sbjct: 211 LDHI---------LVSRPIEVVAARVLD-----YALSDHLPISMRIELPVG 247
>gi|326801323|ref|YP_004319142.1| endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
gi|326552087|gb|ADZ80472.1| Endonuclease/exonuclease/phosphatase [Sphingobacterium sp. 21]
Length = 338
Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 37/109 (33%), Gaps = 12/109 (11%)
Query: 24 VIAGDFNRKINSIGDT----------DDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSL 73
++ GD N D D W + F + + + + S+
Sbjct: 229 IVMGDLNAHFCYEHDNIRDLLAQNGLKDAWVTLKAKDSFPAFKKFVKEDILKLTDDCESI 288
Query: 74 DYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEK 122
D + L N++ ++ + LS HCP+++ + +++
Sbjct: 289 DKILFRSSADLLLTPNAYR--FENEKFNNKEGIPLSDHCPVSLSFSWQQ 335
>gi|326430956|gb|EGD76526.1| hypothetical protein PTSG_07643 [Salpingoeca sp. ATCC 50818]
Length = 291
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 35/137 (25%)
Query: 9 LKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKM--------------DPDGLLIR 54
L KWA + +P+++AGDFN I D + + P
Sbjct: 163 LVKWAHNTANS-LPYIVAGDFN-----IKPKDPCYDMIVNGFIHPEVKGALATPAATFNE 216
Query: 55 FPQEKESTCNV-IKRNKSS----------LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDT 103
P+ S R LDY + + +++ ++ S+ + +
Sbjct: 217 VPKALRSALREHHGREPEFTNWTHEFQDTLDYIFLSDE---WVVRDACDPESFPEGPYPS 273
Query: 104 RRSKLSTHCPLTIEYDF 120
R +S H PL D
Sbjct: 274 ERV-VSDHIPLWATLDL 289
>gi|319944727|ref|ZP_08018991.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC
51599]
gi|319741976|gb|EFV94399.1| endonuclease/exonuclease/phosphatase [Lautropia mirabilis ATCC
51599]
Length = 253
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 25/121 (20%)
Query: 3 SQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKEST 62
++Q L W ++ G P +IAGDFN D D ++ + L + + T
Sbjct: 152 ARQAGALIDWIRAEVPPGAPLLIAGDFN-------DWQDALSRLLVERLGVYEVLDSART 204
Query: 63 CNVIKRNKSSLDYFVIDR---DNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+ + +DR +S+ ++LS H P+ +
Sbjct: 205 ------FPALMPCLRMDRIYVRGFAVETAQVLRGLSW---------ARLSDHAPVVADLT 249
Query: 120 F 120
Sbjct: 250 L 250
>gi|78067868|ref|YP_370637.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
gi|77968613|gb|ABB09993.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. 383]
Length = 271
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W + G P ++AGDFN N D+ + ++ + + +
Sbjct: 170 RQMHWIAHWIVRNAGDG-PLMLAGDFNDWRN---DSVALFGEIGLSEVATLLGESGRT-- 223
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ L + S + + LS H P +
Sbjct: 224 -----FPAFSPALALDKMFVRGLTPLEWRAPSGE-------AAWLSDHLPYIARLRLD 269
>gi|229084175|ref|ZP_04216463.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
gi|228699133|gb|EEL51830.1| Endonuclease/exonuclease/phosphatase [Bacillus cereus Rock3-44]
Length = 190
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK P V+ GD N + D ++ + + + N LD
Sbjct: 88 QKKDANAPVVVVGDMN-DFEFSKPLQALKGDVMKD--MLETVSKDNRYTYIHEGNAQVLD 144
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEKGN 124
+ ++ + + ++ + +++ ++S H P+ + D ++ +
Sbjct: 145 HILVTNN----IAPHTIVDPVHLNTNIMKEHGRVSDHDPVLAQIDLKQAS 190
>gi|218202326|gb|EEC84753.1| hypothetical protein OsI_31756 [Oryza sativa Indica Group]
Length = 1350
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 14/115 (12%)
Query: 13 ADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSS 72
AD + + +P+++ GDFN + + K + +R ++ +C +
Sbjct: 363 ADIRQSSNLPWLVMGDFNEVLWQYEH----FSKRPRNESQMRAFRDALHSCELHDLGFRG 418
Query: 73 LDYFVIDRDNKNF---------LIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
L + D + + + + + + L S S HCP+ ++
Sbjct: 419 LPH-TYDNKREGWNNVKVRLDRAVADGNWRDVFSNAQLSHLVSPCSDHCPIVLQL 472
>gi|309366387|emb|CAP21659.2| hypothetical protein CBG_00185 [Caenorhabditis briggsae AF16]
Length = 706
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 10/100 (10%)
Query: 6 GEWLKKWADQKIKT-----GIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKE 60
E L++ +++ PF+ G+FN + I + W + + + +
Sbjct: 121 LEQLEEQLERRRSHRPHELPFPFITRGEFNISRSMIKECSKPWNNIS--WTIKYEAKVVD 178
Query: 61 STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSD 100
S C+ + + + + + + + V+ + SD
Sbjct: 179 SNCHY---GRFFVTFSGMGENAYKIITSLKITKVTVNTSD 215
>gi|107023983|ref|YP_622310.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
1054]
gi|116691070|ref|YP_836693.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
HI2424]
gi|170734404|ref|YP_001766351.1| endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
MC0-3]
gi|254246936|ref|ZP_04940257.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
PC184]
gi|105894172|gb|ABF77337.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia AU
1054]
gi|116649159|gb|ABK09800.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
HI2424]
gi|124871712|gb|EAY63428.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
PC184]
gi|169817646|gb|ACA92229.1| Endonuclease/exonuclease/phosphatase [Burkholderia cenocepacia
MC0-3]
Length = 271
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W + G P ++AGDFN N D+ + ++ + + +
Sbjct: 170 RQMHWIAHWIVRNAGDG-PLMLAGDFNDWRN---DSVALFGEIGLSEVATLLGESGRT-- 223
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ L + S + + LS H P +
Sbjct: 224 -----FPAFSPALALDKMFVRGLTPLEWRAPSGE-------AAWLSDHLPYIARLRLD 269
>gi|159119049|ref|XP_001709743.1| Hypothetical protein GL50803_14933 [Giardia lamblia ATCC 50803]
gi|157437860|gb|EDO82069.1| hypothetical protein GL50803_14933 [Giardia lamblia ATCC 50803]
Length = 705
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 29/69 (42%)
Query: 45 KMDPDGLLIRFPQEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTR 104
M DGL+ R E + + I + ++ + + D + +FL N+ D D+
Sbjct: 633 IMSDDGLVQRSADEAAARSSNILGHPFTVRHVLQDGSSTHFLTHNNLRGQMIFDHDSDSD 692
Query: 105 RSKLSTHCP 113
S L+ P
Sbjct: 693 GSLLTESVP 701
>gi|77556102|gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 14/110 (12%)
Query: 16 KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVI----KRNKS 71
+ + +P+++ GDFN + + + ++ ++ TC++
Sbjct: 9 RQFSNLPWLVLGDFNEALWQFEH----FSVRQRNETQMQSFRDVLQTCDLHALGFSGVPY 64
Query: 72 SLDYFVIDRDNKNF-----LIDNSFSIVSYDQSDLDTRRSKLSTHCPLTI 116
+ D R+N L DN + + + + + S S HCP+++
Sbjct: 65 TYDNRREGRNNIRVRLDRALADNDWREM-FGNARVSHLTSTRSDHCPISV 113
>gi|134096002|ref|YP_001101077.1| DNase [Herminiimonas arsenicoxydans]
gi|133739905|emb|CAL62956.1| Putative endonuclease/exonuclease/phosphatase family protein
[Herminiimonas arsenicoxydans]
Length = 264
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 16/128 (12%)
Query: 3 SQQGEWLKKWADQKIKTGIPFVIAGDF----NRKINSIGDTDDFWQKMDPD------GLL 52
+Q L + ++G P +IAGDF NR + DT + D + G
Sbjct: 142 KRQTAALIEAVSASAESGAPIIIAGDFNDWGNRLSEELRDTLGVTEVFDANLSRRGFGTY 201
Query: 53 IRFPQEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHC 112
+R + + + +++ + +DR S ++ KLS H
Sbjct: 202 LRQLSGRGTKIQPARTFPAAMPFLQLDRIYVRGFKVESAEVL------HGAMWGKLSDHA 255
Query: 113 PLTIEYDF 120
P+
Sbjct: 256 PIVANLQL 263
>gi|33594836|ref|NP_882479.1| putative endonuclease/exonuclease/phosphatase family protein
[Bordetella parapertussis 12822]
gi|33599108|ref|NP_886668.1| putative endonuclease/exonuclease/phosphatase family protein
[Bordetella bronchiseptica RB50]
gi|33564912|emb|CAE39857.1| putative endonuclease/exonuclease/phosphatase family protein
[Bordetella parapertussis]
gi|33575154|emb|CAE30617.1| putative endonuclease/exonuclease/phosphatase family protein
[Bordetella bronchiseptica RB50]
Length = 286
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 35/151 (23%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN----RKINSIGDTDDFWQKMDPD-----GLLIR 54
+Q + L Q + G P +IAGDFN R ++ G L R
Sbjct: 138 RQIQALTDRIRQSVPDGAPLLIAGDFNDWGDRLAPMFVQQLGLYEVFSHAPRSHGGDLPR 197
Query: 55 FPQEKESTCNVIKRNKSSLDYFVIDRDNKN--------------------FLIDNSFSIV 94
NV++ +S+ V++R+N+ + +
Sbjct: 198 LRDSVRRLGNVLRGVPNSV--AVLERNNQLGMGGAYCPLPPPRTFPAVFPWFRLDRIYQR 255
Query: 95 SYDQSDLDTRR----SKLSTHCPLTIEYDFE 121
+ R ++LS H PL E +
Sbjct: 256 GFAVRSARVLRGREWARLSDHSPLLAELELP 286
>gi|304392145|ref|ZP_07374087.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130]
gi|303296374|gb|EFL90732.1| endonuclease/exonuclease/phosphatase [Ahrensia sp. R2A130]
Length = 380
Score = 35.8 bits (81), Expect = 1.7, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 16/123 (13%)
Query: 11 KWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDG--LLIRFPQEKE-------- 60
W ++ P + G F + DD W +G R PQE+
Sbjct: 260 DWIAEETHGSAPLLDDG-FAINLVDRRAQDDRWTLFYANGKSASARLPQERPTRHLVQLD 318
Query: 61 ---STCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIE 117
++ + K N ++ + + + + Y ++ R K S HCP+ +
Sbjct: 319 YLLASPRLAKGNAKAVPDIIRNGQPYRTVFPPDQEVERYPRTGW--DRPKASDHCPVVVS 376
Query: 118 YDF 120
D
Sbjct: 377 LDM 379
>gi|325109290|ref|YP_004270358.1| endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
5305]
gi|324969558|gb|ADY60336.1| Endonuclease/exonuclease/phosphatase [Planctomyces brasiliensis DSM
5305]
Length = 247
Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 23/122 (18%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCN 64
Q L D + +P +I GDFN W+ DG E
Sbjct: 136 QVNHLLDHVDLQDNLDLPTLIVGDFND-----------WRNTLADGP--FAKHGFEQLTR 182
Query: 65 VIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKL----STHCPLTIEYDF 120
R ++ Y I +D +F + D+ R++L S H PL +++
Sbjct: 183 PPSRYRTFPAYLPIGS------LDKAFCRGPINVRDVRVVRNQLTKEASDHLPLLVDFHL 236
Query: 121 EK 122
E+
Sbjct: 237 ER 238
>gi|254825627|ref|ZP_05230628.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
J1-194]
gi|254853407|ref|ZP_05242755.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
R2-503]
gi|254992839|ref|ZP_05275029.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes FSL J2-064]
gi|255519856|ref|ZP_05387093.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes FSL J1-175]
gi|300764548|ref|ZP_07074540.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes FSL N1-017]
gi|258606777|gb|EEW19385.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
R2-503]
gi|293594872|gb|EFG02633.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
J1-194]
gi|300514655|gb|EFK41710.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes FSL N1-017]
Length = 256
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 14/107 (13%)
Query: 18 KTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDYFV 77
P ++ GDFN + N+ + + D LI S S D+
Sbjct: 157 AENSPVIVLGDFNTQPNTPTYN--YITEKYQDAQLI-------SQKPAKGPTGSFHDFHP 207
Query: 78 IDRDNKN-----FLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+ N+ + N F + +Y+ + S H P+T D
Sbjct: 208 LRPQNELEKIDYIFVSNEFKVNTYETIVDEVDGFSASDHFPVTANLD 254
>gi|254486542|ref|ZP_05099747.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
sp. GAI101]
gi|214043411|gb|EEB84049.1| endonuclease/exonuclease/phosphatase family protein [Roseobacter
sp. GAI101]
Length = 341
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 26/141 (18%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDF--------------WQKMDPDG 50
Q WL+ D+ ++ G P ++ GD N D F + DP
Sbjct: 200 QAIWLRGRIDEHLERGSPLMVMGDLNDGPGLDAFEDFFGRSSVEIVLGHRGAFALTDPHA 259
Query: 51 LLIR------FPQEKESTCNVIKRN-KSSLDYFVI-----DRDNKNFLIDNSFSIVSYDQ 98
P KR ++ LDY ++ D + + + +
Sbjct: 260 TRALGQRIGAMPTTSRFWIAPEKRYLQALLDYIMVSPQFTDNNARWRIWHPLDDPECWAD 319
Query: 99 SDLDTRRSKLSTHCPLTIEYD 119
+DL S H P+TIE+D
Sbjct: 320 ADLRDALVTASDHFPVTIEFD 340
>gi|325106148|ref|YP_004275802.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
gi|324974996|gb|ADY53980.1| Endonuclease/exonuclease/phosphatase [Pedobacter saltans DSM 12145]
Length = 372
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 23/121 (19%)
Query: 3 SQQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKEST 62
++Q E LK + D PFVI GDFN S ++ D +
Sbjct: 274 AKQVEILKSYTDSCKT---PFVIMGDFNDTPVSYSVN-----QISKDLKNSFIEKGVGIG 325
Query: 63 CNVIKRNKSS-LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +DY + +D +D + S H P+ ++
Sbjct: 326 RTYNGDFPNFQIDYILTTKD--------------FDIHTYKIIKKAYSDHYPVRVDVSVG 371
Query: 122 K 122
K
Sbjct: 372 K 372
>gi|114771793|ref|ZP_01449186.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255]
gi|114547609|gb|EAU50500.1| exodeoxyribonuclease III [alpha proteobacterium HTCC2255]
Length = 260
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 26/122 (21%)
Query: 21 IPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNV---------IKRNKS 71
PF++AGDFN I +D W + P+ + + + +NKS
Sbjct: 143 EPFLLAGDFN----IIPQAEDCWDTKVWESDAAYLPESRAAYRKILNLGLTDAFRVKNKS 198
Query: 72 SLDYFVIDRDNKNFLIDNSFS------------IVSYDQSDLDTR-RSKLSTHCPLTIEY 118
+++Y D + +N I+ QSD + R R K S H P+ +E
Sbjct: 199 AMNYTFWDYQAGAWNKNNGIRIDHFLLSSSCADILIDCQSDRECRARDKPSDHVPVWVEL 258
Query: 119 DF 120
D
Sbjct: 259 DI 260
>gi|187922391|ref|YP_001894033.1| endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans
PsJN]
gi|187713585|gb|ACD14809.1| Endonuclease/exonuclease/phosphatase [Burkholderia phytofirmans
PsJN]
Length = 265
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN 30
+Q W+ W ++ G P V+AGDFN
Sbjct: 166 RQMNWIAHWIAKEAPEG-PLVLAGDFN 191
>gi|103486507|ref|YP_616068.1| endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis
RB2256]
gi|98976584|gb|ABF52735.1| Endonuclease/exonuclease/phosphatase [Sphingopyxis alaskensis
RB2256]
Length = 289
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 41/127 (32%), Gaps = 18/127 (14%)
Query: 6 GEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDT---------DDFWQKMDPDGLLIRFP 56
L++W + G V+ GDFN ++S + P
Sbjct: 171 ARQLRRWIGANRRRGETVVLMGDFNSPVDSPPHDAITDPAPGPAALHDTLAISRTPHFGP 230
Query: 57 QEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTI 116
+ ++ + + S +D+ +++ +++ + T S H P+
Sbjct: 231 LGTFTGFDIERNDPSPIDHI---------FVNDGTAVLRHATLTQQTGGKLPSDHYPVLA 281
Query: 117 EYDFEKG 123
+ +G
Sbjct: 282 DLCVGRG 288
>gi|330818610|ref|YP_004362315.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
gladioli BSR3]
gi|327371003|gb|AEA62359.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
gladioli BSR3]
Length = 268
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 39/118 (33%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W + + G P V+AGDFN N D+ + ++ + + +
Sbjct: 169 RQMTWIAHWIEHHAQDG-PLVLAGDFNDWRN---DSVPLFGEIGLSEVATLLGESGRT-- 222
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ L + + D + LS H P +
Sbjct: 223 -----FPAFSPALALDKMFVRGLTPLEWQAPTDDT-------AWLSDHLPYIARLRLD 268
>gi|254251164|ref|ZP_04944482.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
gi|124893773|gb|EAY67653.1| Metal-dependent hydrolase [Burkholderia dolosa AUO158]
Length = 271
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ + P V+AGDFN N D+ + ++ + + +
Sbjct: 170 RQMNWIAHWI-ERNASDGPLVLAGDFNDWRN---DSVALFAEIGLSEVATLLGESGRT-- 223
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ L + S + + LS H P +
Sbjct: 224 -----FPAFSPALALDKMFVRGLTPLEWQAPSGET-------AWLSDHLPYIARLRLD 269
>gi|310779140|ref|YP_003967473.1| Endonuclease/exonuclease/phosphatase [Ilyobacter polytropus DSM
2926]
gi|309748463|gb|ADO83125.1| Endonuclease/exonuclease/phosphatase [Ilyobacter polytropus DSM
2926]
Length = 281
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 5/99 (5%)
Query: 24 VIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDYFVIDRDNK 83
+I GDFN D F + + + T K +S D
Sbjct: 185 LIGGDFN----LPAYDDSFRRLFSHEDQIFYGIDPVNKTTIGKKGLSNSYDNIFYSYRYT 240
Query: 84 NFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEK 122
NS ++ + Q + R +S H P+ IE D K
Sbjct: 241 KEFTGNS-GVIDFTQGNYSEVRKSISDHLPVFIEVDTTK 278
>gi|238028875|ref|YP_002913106.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
glumae BGR1]
gi|237878069|gb|ACR30402.1| Endonuclease/exonuclease/phosphatase family protein [Burkholderia
glumae BGR1]
Length = 268
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN 30
+Q W+ W + + G P V+AGDFN
Sbjct: 169 RQMTWIAHWIEHHAQEG-PLVLAGDFN 194
>gi|15888787|ref|NP_354468.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58]
gi|15156541|gb|AAK87253.1| hypothetical protein Atu1461 [Agrobacterium tumefaciens str. C58]
Length = 269
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 44/116 (37%), Gaps = 20/116 (17%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQE--KEST 62
Q + L ++ + G ++ GDFN + + ++ L+ ++
Sbjct: 171 QAKRLVQFVKNIAEDGDRVIVCGDFN-----VLPDSRTFAVLNELDLVELVTTRGFTDTR 225
Query: 63 CNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
+ + DY +++ V Q D+ R+ ++S HCPL +E+
Sbjct: 226 TSHYAKPNRYADYLLVNP------------AVKVSQFDV-VRQPEVSDHCPLLLEF 268
>gi|33591896|ref|NP_879540.1| putative endonuclease/exonuclease/phosphatase family protein
[Bordetella pertussis Tohama I]
gi|33571540|emb|CAE41020.1| putative endonuclease/exonuclease/phosphatase family protein
[Bordetella pertussis Tohama I]
gi|332381313|gb|AEE66160.1| putative endonuclease/exonuclease/phosphatase family protein
[Bordetella pertussis CS]
Length = 286
Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 47/151 (31%), Gaps = 35/151 (23%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN----RKINSIGDTDDFWQKMDPD-----GLLIR 54
+Q + L Q + G P +I GDFN R ++ G L R
Sbjct: 138 RQIQALTDRIRQSVPDGAPLLIVGDFNDWGDRLAPMFVQQLGLYEVFSHAPRSHGGDLPR 197
Query: 55 FPQEKESTCNVIKRNKSSLDYFVIDRDNKN--------------------FLIDNSFSIV 94
NV++ +S+ V++R+N+ + +
Sbjct: 198 LRDSVRRLGNVLRGVPNSV--AVLERNNQLGMGGAYCPLPPPRTFPAVFPWFRLDRIYQR 255
Query: 95 SYDQSDLDTRR----SKLSTHCPLTIEYDFE 121
+ R ++LS H PL E +
Sbjct: 256 GFAVRSARVLRGREWARLSDHSPLLAELELP 286
>gi|332670164|ref|YP_004453172.1| 5'-Nucleotidase domain-containing protein [Cellulomonas fimi ATCC
484]
gi|332339202|gb|AEE45785.1| 5'-Nucleotidase domain-containing protein [Cellulomonas fimi ATCC
484]
Length = 1651
Score = 35.1 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 36/129 (27%), Gaps = 18/129 (13%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q L+ W + GDFN + D D +
Sbjct: 694 RQATALRDWVPTIQGDTEAVALVGDFN----AYTREDPLQVLYDAGYVDAVQQLAPGQWS 749
Query: 64 NVIKRNKSSLDYFVIDRDNKN-------FLIDNSFSI-VSYDQSD------LDTRRSKLS 109
SLD+ +++ + I+ SI + Y + + + S
Sbjct: 750 YTFSGLSGSLDHVLLNEAALARATGADVWEINAEESIALEYSRYNYHGTLFYADDVYRSS 809
Query: 110 THCPLTIEY 118
H P+ +
Sbjct: 810 DHDPVVVGL 818
>gi|167579454|ref|ZP_02372328.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
thailandensis TXDOH]
gi|167617551|ref|ZP_02386182.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
thailandensis Bt4]
gi|257140578|ref|ZP_05588840.1| endonuclease/exonuclease/phosphatase [Burkholderia thailandensis
E264]
Length = 270
Score = 35.1 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ G P V+AGDFN N D+ + ++ + + +
Sbjct: 169 RQMHWIAHWIERNAGAG-PLVLAGDFNDWRN---DSIPLFGEIGLSEVATLLGESGRT-- 222
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + + + LS H P +
Sbjct: 223 -----FPAFSPALALDKMFVRGMTPLEWRAPGDET-------AWLSDHLPYVARLRLD 268
>gi|257070188|ref|YP_003156443.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810]
gi|256561006|gb|ACU86853.1| exodeoxyribonuclease III Xth [Brachybacterium faecium DSM 4810]
Length = 308
Score = 35.1 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 39/134 (29%), Gaps = 35/134 (26%)
Query: 14 DQKIKTGIPFVIAGDFN------------RKIN----SIGDTDDFWQKMDP----DGLLI 53
G F++ GD N R N + + ++ P D +
Sbjct: 182 RAAAAQGRQFLLMGDLNIAHTRQDLAAWRRNQNNDGFLPEEREWLGAQLSPRTLVDVVRR 241
Query: 54 RFPQEKESTCNVIKRNKSS-------LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRS 106
PQE +S +DY + + D + R
Sbjct: 242 LHPQEDGPYSWWSWLGQSFAKDAGWRIDY--------HLATPRLARSALRAEVDREVRGV 293
Query: 107 KLSTHCPLTIEYDF 120
+LS H P+ ++YD
Sbjct: 294 RLSDHAPVVVDYDL 307
>gi|83718570|ref|YP_440771.1| hypothetical protein BTH_I0213 [Burkholderia thailandensis E264]
gi|83652395|gb|ABC36458.1| conserved hypothetical protein [Burkholderia thailandensis E264]
Length = 230
Score = 35.1 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 38/118 (32%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W ++ G P V+AGDFN N D+ + ++ + + +
Sbjct: 129 RQMHWIAHWIERNAGAG-PLVLAGDFNDWRN---DSIPLFGEIGLSEVATLLGESGRT-- 182
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + + + LS H P +
Sbjct: 183 -----FPAFSPALALDKMFVRGMTPLEWRAPGDET-------AWLSDHLPYVARLRLD 228
>gi|296137256|ref|YP_003644498.1| Endonuclease/exonuclease/phosphatase [Thiomonas intermedia K12]
gi|295797378|gb|ADG32168.1| Endonuclease/exonuclease/phosphatase [Thiomonas intermedia K12]
Length = 278
Score = 35.1 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 11/121 (9%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q + L + ++ ++AGDFN IG +D ++ K S
Sbjct: 146 RQTDRLLDYIAARVPAQAALIVAGDFNDWHGRIGPQLLQQGLVDVSEPPLK-TNGKTSWR 204
Query: 64 NVIKRNKSSLDYFVIDR-DNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPL--TIEYDF 120
++ + L +DR + F S S + ++LS H PL ++ D
Sbjct: 205 KRVRTYPARLPLMPLDRIYARAF----SASEIGLG---WGRAWARLSDHAPLLASLRCDQ 257
Query: 121 E 121
Sbjct: 258 P 258
>gi|290892528|ref|ZP_06555521.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
J2-071]
gi|290557837|gb|EFD91358.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
J2-071]
Length = 256
Score = 35.1 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 36/109 (33%), Gaps = 18/109 (16%)
Query: 18 KTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNK------- 70
P ++ GDFN + N+ + + D LI K T + +
Sbjct: 157 AENSPVIVLGDFNTQPNTPTYN--YITEKYQDAQLISQKPAKGPTGSFHDFHPLRPENEL 214
Query: 71 SSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+DY + N F + +Y+ + S H P+T D
Sbjct: 215 EKIDYI---------FVSNEFQVNTYETIVDEVDGFSASDHFPVTANLD 254
>gi|268580595|ref|XP_002645280.1| Hypothetical protein CBG00185 [Caenorhabditis briggsae]
Length = 540
Score = 35.1 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 5/87 (5%)
Query: 14 DQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSL 73
+ + PF+ G+FN + I + W + + + +S C+ + +
Sbjct: 8 HRPHELPFPFITRGEFNISRSMIKECSKPWNNIS--WTIKYEAKVVDSNCHY---GRFFV 62
Query: 74 DYFVIDRDNKNFLIDNSFSIVSYDQSD 100
+ + + + + V+ + SD
Sbjct: 63 TFSGMGENAYKIITSLKITKVTVNTSD 89
>gi|227538285|ref|ZP_03968334.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227241800|gb|EEI91815.1| endonuclease/exonuclease/phosphatase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 326
Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 13/110 (11%)
Query: 24 VIAGDFNRKINSIGDTD----------DFWQKMDPDGLLIRF-PQEKESTCNVIKRNKSS 72
++ GDFN + D D W ++ G++ P I+++K S
Sbjct: 217 LLMGDFNAHYSFELDNVRNFIKETRMIDTWVYLENKGIVPHIDPIYSAGDILAIRKDKES 276
Query: 73 LDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEK 122
+D + I ++I + +D LS HC +++ + +E+
Sbjct: 277 IDKIMFRNSADLHFIPERYTIENRLFTD--KSGIPLSDHCAVSLSFSWER 324
>gi|167585165|ref|ZP_02377553.1| Endonuclease/exonuclease/phosphatase [Burkholderia ubonensis Bu]
Length = 274
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 20/118 (16%), Positives = 41/118 (34%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W + K G P V+AGDFN N D+ + ++ + + +
Sbjct: 171 RQMHWIAHWIVRHAKDG-PLVLAGDFNDWRN---DSIPLFGEIGLTEVATLLGESGRT-- 224
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + ++ +T + LS H P +
Sbjct: 225 -----FPAFSPALALDKMFVRGMTP-----LEWNAPSGET--AWLSDHLPYIARLRLD 270
>gi|16802368|ref|NP_463853.1| hypothetical protein lmo0323 [Listeria monocytogenes EGD-e]
gi|224502384|ref|ZP_03670691.1| hypothetical protein LmonFR_07664 [Listeria monocytogenes FSL
R2-561]
gi|16409687|emb|CAD00850.1| lmo0323 [Listeria monocytogenes EGD-e]
Length = 256
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 6/103 (5%)
Query: 18 KTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNK-SSLDYF 76
P +I GDFN + ++ F K D LI K + ++
Sbjct: 157 AENSPVIILGDFNTEPDTPTYN--FITKKYQDAQLISQKHAKGPIGSFHDFRPLRPINEL 214
Query: 77 VIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+ F + +Y+ + S H P+T D
Sbjct: 215 ---EKIDYIFVSEEFQVCTYETIVDEVDGFSASDHFPVTANLD 254
>gi|89070957|ref|ZP_01158183.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola
granulosus HTCC2516]
gi|89043464|gb|EAR49678.1| possible Endonuclease/Exonuclease/phosphatase fa [Oceanicola
granulosus HTCC2516]
Length = 333
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 28/142 (19%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINS---------------IGDTDDFWQKMDPD 49
Q WL++ + ++ G ++ GDFN +G ++ Q DP
Sbjct: 192 QCIWLRRRVEAQLARGDSLIVLGDFNDGPGLDEYEKLFGRSGVEIVLGIGEEL-QLHDPH 250
Query: 50 GLLIRFPQEKESTCNVIKRNKS-------SLDYFVI--DRDNK--NFLIDNSFSI-VSYD 97
I + R LDY ++ D + + I + F +
Sbjct: 251 AAAILSRPTLARPSSARFRVPPDGRFLAAMLDYVMVSPDLAARYPAWRIWHPFEDPALFA 310
Query: 98 QSDLDTRRSKLSTHCPLTIEYD 119
DL S H P++++ D
Sbjct: 311 DPDLRHALLTASDHFPVSLDLD 332
>gi|170699632|ref|ZP_02890670.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
IOP40-10]
gi|170135448|gb|EDT03738.1| Endonuclease/exonuclease/phosphatase [Burkholderia ambifaria
IOP40-10]
Length = 271
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 38/118 (32%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W + G P V+AGDFN N D+ + ++ + Q +
Sbjct: 170 RQMHWIAHWIVRNAGDG-PLVLAGDFNDWRN---DSVALFGEIGMSEVATLLGQSGRT-- 223
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ L + S + + LS H P +
Sbjct: 224 -----FPAFSPALALDKMFVRGLTPLEWQAPSGET-------AWLSDHLPYIARLRLD 269
>gi|260061728|ref|YP_003194808.1| lipoprotein [Robiginitalea biformata HTCC2501]
gi|88785860|gb|EAR17029.1| lipoprotein, putative [Robiginitalea biformata HTCC2501]
Length = 438
Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 7/79 (8%)
Query: 28 DFNRKINSIGDTDDFWQKMDPDGLLIRFP-QEKESTCNVIKRNKSSLDYFVIDRDNKNFL 86
DF N D FW D ++ + ++ CN + K+ D+ +
Sbjct: 228 DFEYSYNEPMHNDYFWHDAYSDYPVVGVSWSQAKAFCNWRTKFKND------DQRARGKQ 281
Query: 87 IDNSFSIVSYDQSDLDTRR 105
N F + + + + R
Sbjct: 282 FVNQFRLPTEAEWEYAARG 300
>gi|319954283|ref|YP_004165550.1| endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
14237]
gi|319422943|gb|ADV50052.1| Endonuclease/exonuclease/phosphatase [Cellulophaga algicola DSM
14237]
Length = 339
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 40/106 (37%), Gaps = 20/106 (18%)
Query: 16 KIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRN-KSSLD 74
K K+ +I GDFN + ++ + D + R +D
Sbjct: 253 KDKSPYRAIICGDFN-----GTQYSNVYKTIRGDMQDTFQEKGSGYGRTYNFRYYPVRID 307
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120
+ L+++SF+++S+ ++ LS H P+ ++F
Sbjct: 308 FI---------LVEDSFNVLSHKNYNVK-----LSDHFPVMTSFNF 339
>gi|224498832|ref|ZP_03667181.1| hypothetical protein LmonF1_03653 [Listeria monocytogenes Finland
1988]
Length = 256
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 6/103 (5%)
Query: 18 KTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNK-SSLDYF 76
P +I GDFN + ++ F K D LI + K + ++
Sbjct: 157 AENSPVIILGDFNTEPDTPTYN--FITKKYQDAQLISQKRAKGPIGSFHDFRPLRPINEL 214
Query: 77 VIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+ F + +Y+ + S H P+T D
Sbjct: 215 ---EKIDYIFVSEEFQVCTYETIVDEVDGFSASDHFPVTANLD 254
>gi|255020245|ref|ZP_05292314.1| hypothetical protein ACA_0982 [Acidithiobacillus caldus ATCC 51756]
gi|254970387|gb|EET27880.1| hypothetical protein ACA_0982 [Acidithiobacillus caldus ATCC 51756]
Length = 915
Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 6 GEWLKKWADQKIKTGIPFVIAGDFNRKINS 35
L W + GIP ++ GDF +++
Sbjct: 346 VPALSHWIREARAQGIPILLLGDFQNDLDA 375
>gi|163753635|ref|ZP_02160758.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1]
gi|161325849|gb|EDP97175.1| Endonuclease/exonuclease/phosphatase [Kordia algicida OT-1]
Length = 269
Score = 34.7 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 7/107 (6%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
QK F++AGDFN + + P + + + C +D
Sbjct: 169 QKNYKNKKFILAGDFNLSQSEEVFKNFKLAGFKPVNIDQKTTLKL--ICKNASYLNYPID 226
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQS-DLDTRRSKLSTHCPLTIEYDF 120
+ S I+ + + D T +LS H P+ +++
Sbjct: 227 NIFY----TPKINATSTKIIDFVKHCDNLTASRRLSDHLPVELKFRL 269
>gi|91781509|ref|YP_556715.1| putative metal-dependent hydrolase [Burkholderia xenovorans LB400]
gi|91685463|gb|ABE28663.1| Putative metal-dependent hydrolase [Burkholderia xenovorans LB400]
Length = 265
Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN 30
+Q W+ W ++ G P V+AGDFN
Sbjct: 166 RQMNWIAHWIAKEAPQG-PLVLAGDFN 191
>gi|307826200|ref|ZP_07656410.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum
SV96]
gi|307732734|gb|EFO03601.1| Endonuclease/exonuclease/phosphatase [Methylobacter tundripaludum
SV96]
Length = 284
Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 14/117 (11%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
Q L D + P +IAGDFN + +G D + L +E+
Sbjct: 182 LQISKLCARIDSHVPHDAPLIIAGDFN---DWLGQADRLFH-----DHLGLQEVFRETHG 233
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120
+ + + + +DR L S +S+ + LS H PLT +
Sbjct: 234 RYARSFPAWMPFLPMDRIYYRGLTPVSCERLSHAPWHV------LSDHAPLTASFTL 284
>gi|296160793|ref|ZP_06843606.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. Ch1-1]
gi|295888885|gb|EFG68690.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. Ch1-1]
Length = 265
Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN 30
+Q W+ W ++ G P V+AGDFN
Sbjct: 166 RQMNWIAHWIAKEAPQG-PLVLAGDFN 191
>gi|323524486|ref|YP_004226639.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
gi|323381488|gb|ADX53579.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1001]
Length = 265
Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN 30
+Q W+ W ++ G P V+AGDFN
Sbjct: 166 RQMNWIAHWITKEAPDG-PLVLAGDFN 191
>gi|167835069|ref|ZP_02461952.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
thailandensis MSMB43]
Length = 270
Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W + TG P V+AGDFN N D+ + ++ + + +
Sbjct: 169 RQMHWIAHWIVRNASTG-PLVLAGDFNDWRN---DSIPLFGEIGLSEVATLLGEPGRT-- 222
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ + + + + LS H P +
Sbjct: 223 -----FPAFSPALALDKMFVRGMTPLEWRAPGDET-------AWLSDHLPYIARLRLD 268
>gi|170693952|ref|ZP_02885108.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M]
gi|170141024|gb|EDT09196.1| Endonuclease/exonuclease/phosphatase [Burkholderia graminis C4D1M]
Length = 265
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN 30
+Q W+ W ++ G P V+AGDFN
Sbjct: 166 RQMNWIAHWIAKEAPDG-PLVLAGDFN 191
>gi|47096406|ref|ZP_00234000.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes str. 1/2a F6854]
gi|254900495|ref|ZP_05260419.1| hypothetical protein LmonJ_11794 [Listeria monocytogenes J0161]
gi|254913554|ref|ZP_05263566.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes J2818]
gi|254937865|ref|ZP_05269562.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900]
gi|47015201|gb|EAL06140.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes str. 1/2a F6854]
gi|258610472|gb|EEW23080.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes F6900]
gi|293591565|gb|EFF99899.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes J2818]
Length = 256
Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 32/102 (31%), Gaps = 6/102 (5%)
Query: 19 TGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNK-SSLDYFV 77
P +I GDFN + ++ F K D LI K + ++
Sbjct: 158 ENSPVIILGDFNTEPDTPTYN--FITKKYQDAQLISQKHAKGPIGSFHDFRPLRPINEL- 214
Query: 78 IDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+ F + +Y+ + S H P+T D
Sbjct: 215 --EKIDYIFVSEEFQVCTYETIVDEVDGFSASDHFPVTANLD 254
>gi|293400493|ref|ZP_06644638.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305519|gb|EFE46763.1| exodeoxyribonuclease III [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 253
Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 15/62 (24%)
Query: 59 KESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
K N R +DYF++ D K+ + + S + S HCP++++
Sbjct: 207 KAREKNAGWR----IDYFLVSEDAKDKIQEASIHTDVFG-----------SDHCPVSLDI 251
Query: 119 DF 120
DF
Sbjct: 252 DF 253
>gi|206558938|ref|YP_002229698.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
cenocepacia J2315]
gi|198034975|emb|CAR50847.1| endonuclease/exonuclease/phosphatase family protein [Burkholderia
cenocepacia J2315]
Length = 271
Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 37/118 (31%), Gaps = 18/118 (15%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
+Q W+ W + P V+AGDFN N D+ + ++ + + +
Sbjct: 170 RQMHWIAHWIV-RNAGDDPLVLAGDFNDWRN---DSVALFGEIGLSEVATLLGESGRT-- 223
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFE 121
+ +D+ L + S + + LS H P +
Sbjct: 224 -----FPAFSPALALDKMFVRGLTPLEWRAPSGE-------AAWLSDHLPYIARLRLD 269
>gi|254828780|ref|ZP_05233467.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
N3-165]
gi|258601187|gb|EEW14512.1| endonuclease/exonuclease/phosphatase [Listeria monocytogenes FSL
N3-165]
Length = 256
Score = 33.9 bits (76), Expect = 6.6, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 6/103 (5%)
Query: 18 KTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNK-SSLDYF 76
P +I GDFN + ++ F K D LI K + S++
Sbjct: 157 AENSPVIILGDFNTEPDTPTYN--FITKKYQDAQLISQKHAKGPIGSFHDFRPLRSINEL 214
Query: 77 VIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+ F + +Y+ + S H P+T D
Sbjct: 215 ---EKIDYIFVSEEFQVCTYETIVDEVDGFSASDHFPVTANLD 254
>gi|99081700|ref|YP_613854.1| endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040]
gi|99037980|gb|ABF64592.1| Endonuclease/exonuclease/phosphatase [Ruegeria sp. TM1040]
Length = 344
Score = 33.9 bits (76), Expect = 6.6, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 32/147 (21%)
Query: 5 QGEWLKKWADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQKM---------------DPD 49
Q WL+ + +++ G P V+ GD N G D ++ + DP
Sbjct: 193 QAVWLRARVEDRLEAGAPLVVMGDLN-----DGPGLDAYEALFGRSSVEIIMGQELFDPH 247
Query: 50 GLLIRFPQEKESTCNVIKRN----KSS---LDYFVIDRD----NKNFLIDNSFSIVS-YD 97
+ P ++ + N + LDY +I + I + F + Y
Sbjct: 248 ARHLLRPNQQGLPTSARFYNHLEGRYFQALLDYIMISPPLQACAPRWRIWHPFEDAACYG 307
Query: 98 QSDLDTRRSKLSTHCPLTIEYDFEKGN 124
L S H P+T++ D + +
Sbjct: 308 TPSLCHALLTASDHFPVTLDLDLTQAS 334
>gi|307728210|ref|YP_003905434.1| endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
gi|307582745|gb|ADN56143.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1003]
Length = 265
Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN 30
+Q W+ W ++ G P V+AGDFN
Sbjct: 166 RQMNWIAHWISKEAPDG-PLVLAGDFN 191
>gi|295675193|ref|YP_003603717.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
gi|295435036|gb|ADG14206.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. CCGE1002]
Length = 265
Score = 33.9 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN 30
+Q W+ W ++ G P V+AGDFN
Sbjct: 166 RQMNWIAHWIAKEAPDG-PLVLAGDFN 191
>gi|209519157|ref|ZP_03267961.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160]
gi|209500383|gb|EEA00435.1| Endonuclease/exonuclease/phosphatase [Burkholderia sp. H160]
Length = 265
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Query: 4 QQGEWLKKWADQKIKTGIPFVIAGDFN 30
+Q W+ W ++ G P V+AGDFN
Sbjct: 166 RQMNWIAHWIAKEAPDG-PLVLAGDFN 191
>gi|254831846|ref|ZP_05236501.1| hypothetical protein Lmon1_10855 [Listeria monocytogenes 10403S]
Length = 256
Score = 33.9 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 6/103 (5%)
Query: 18 KTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNK-SSLDYF 76
P +I GDFN + ++ F K D LI + K + ++
Sbjct: 157 AENSPVIILGDFNTEPDTPTYN--FITKKYQDAQLISQKRAKGPIGSFHDFRPLRPINEL 214
Query: 77 VIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
+ F + +Y+ + S H P+T D
Sbjct: 215 ---EKIDYIFVSKEFQVCTYETIVDEVDGFSASDHFPVTANLD 254
>gi|91095311|ref|XP_973868.1| PREDICTED: similar to reverse transcriptase homolog [Tribolium
castaneum]
gi|270017183|gb|EFA13629.1| hypothetical protein TcasGA2_TC005274 [Tribolium castaneum]
Length = 971
Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 40/119 (33%), Gaps = 17/119 (14%)
Query: 9 LKKWADQKIKTGIPFVIAGDFNRKINSIGD-----TDDFWQKMDPDGLLIRFPQEKESTC 63
L Q + +I GDFN + GD + L R P +
Sbjct: 119 LSNELMQYAASLPKAIILGDFNARHTDFGDTLTNRNGHILIDAISNLPLYRIPNSSPTHI 178
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEK 122
N S +D+ L+ +S S + D +++ T + S H PL + K
Sbjct: 179 N-HWEGYSIVDHI---------LVTDSLSNRASDSANIGT--TITSDHLPLVFDLSVSK 225
>gi|332142708|ref|YP_004428446.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str.
'Deep ecotype']
gi|327552730|gb|AEA99448.1| Endonuclease/exonuclease/phosphatase [Alteromonas macleodii str.
'Deep ecotype']
Length = 237
Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 20/119 (16%)
Query: 5 QGEWLKKWADQKIKTGI-PFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTC 63
Q L + Q++K P V+AGDFN WQ + S
Sbjct: 135 QFSLLHEHLSQRLKEKQTPLVLAGDFNE-----------WQFFSK------AFKGLNSLL 177
Query: 64 NVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDFEK 122
K + +F + ++ ++ D+ + TR S H P+ I+ + +
Sbjct: 178 FQQKVGATFPSHFPVFSLDRVWVTDDIKVKACRKLKNAKTRVY--SDHLPVLIDIELPE 234
>gi|303237381|ref|ZP_07323951.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN]
gi|302482768|gb|EFL45793.1| exodeoxyribonuclease III [Prevotella disiens FB035-09AN]
Length = 250
Score = 33.9 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 15/62 (24%)
Query: 59 KESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEY 118
K N R +DYF++ + L+D Y S HCP+ +E
Sbjct: 204 KAREKNAGWR----IDYFLLSDRLRAQLVDAKIHTEVYG-----------SDHCPVEVEL 248
Query: 119 DF 120
+F
Sbjct: 249 NF 250
>gi|312130846|ref|YP_003998186.1| endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
17132]
gi|311907392|gb|ADQ17833.1| Endonuclease/exonuclease/phosphatase [Leadbetterella byssophila DSM
17132]
Length = 600
Score = 33.5 bits (75), Expect = 8.7, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 42/139 (30%), Gaps = 32/139 (23%)
Query: 4 QQGEWLKKWADQK-IKTGIP-FVIAGDFNR--------------------KINSIGDTDD 41
QQ E LK W + T P +++ GDFN + D
Sbjct: 468 QQAEDLKNWLATRPTGTDDPDYILMGDFNSYAMEDPLIYLDEQGYHPLFPATSYSYVYDG 527
Query: 42 FWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDL 101
FW +D L + + V S + V+D + + +S
Sbjct: 528 FWGSLDH--ALATPTMKSQVKKAVKWHIN-SDEAPVLDYNM-------EYKSAEQIKSYY 577
Query: 102 DTRRSKLSTHCPLTIEYDF 120
D + S H P+ I
Sbjct: 578 DASPFRSSDHDPIIIRLKL 596
>gi|188588970|ref|YP_001920998.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
botulinum E3 str. Alaska E43]
gi|188499251|gb|ACD52387.1| endonuclease/exonuclease/phosphatase family protein [Clostridium
botulinum E3 str. Alaska E43]
Length = 258
Score = 33.5 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 3/106 (2%)
Query: 15 QKIKTGIPFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNKSSLD 74
++ K +P +I GDFN NS D + L+ ++K+ N N + +
Sbjct: 155 EQEKEDLPLIIMGDFNSNPNSKLIKDFINGDVLNKRLVAVQDKKKDLYNNATMGNFKNKE 214
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYDF 120
+ F I+ + + S H PL E +
Sbjct: 215 K---GSHIDYIFVSEEFEIIDVEIVKYNVNGKYPSDHYPLMAEINI 257
>gi|313610961|gb|EFR85889.1| endonuclease/exonuclease/phosphatase family protein [Listeria
monocytogenes FSL F2-208]
Length = 273
Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 18/105 (17%)
Query: 22 PFVIAGDFNRKINSIGDTDDFWQKMDPDGLLIRFPQEKESTCNVIKRNK-------SSLD 74
P +I GDFN + N+ + + D LI K T + + +D
Sbjct: 178 PVIILGDFNTQPNTPTYN--YITEKYQDAQLISQKPAKGPTGSFHDFHPLRPENELEKID 235
Query: 75 YFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCPLTIEYD 119
Y + N F + +Y+ + S H P+T D
Sbjct: 236 YI---------FVSNEFQVSTYETIVDEVEGFSASDHFPVTANLD 271
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.313 0.132 0.377
Lambda K H
0.267 0.0405 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,231,932,185
Number of Sequences: 14124377
Number of extensions: 75061145
Number of successful extensions: 187447
Number of sequences better than 10.0: 257
Number of HSP's better than 10.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 221
Number of HSP's that attempted gapping in prelim test: 187097
Number of HSP's gapped (non-prelim): 313
length of query: 125
length of database: 4,842,793,630
effective HSP length: 91
effective length of query: 34
effective length of database: 3,557,475,323
effective search space: 120954160982
effective search space used: 120954160982
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 75 (33.5 bits)