PSIBLAST alignment of GI: 254780995 and protein with PDB id: 2jc5

gi|157883966|pdb|2JC5|A Chain A, Apurinic Apyrimidinic (Ap) Endonuclease (Nape) From Neisseria Meningitidis Length = 259

 Score = 62.2 bits (149), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 33/127 (25%), Gaps = 23/127 (18%)

Query: 13  ADQKIKTGIPFVIAGDFNRKINSIGDTDDFWQK-------------------MDPDGLLI 53
            +     G   V+ GD+N    +I   +    +                   +    +  
Sbjct: 134 LEAMKNEGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWR 193

Query: 54  RFPQEKESTCNVIKRNKSSLDYFVIDRDNKNFLIDNSFSIVSYDQSDLDTRRSKLSTHCP 113
               +         R ++              ++    +      S    +  K S H P
Sbjct: 194 TLYPDVPGYTWWSNRGQAYAKDVGW--RIDYQMVTPELAAK--AVSAHVYKDEKFSDHAP 249

Query: 114 LTIEYDF 120
           L +EYD+
Sbjct: 250 LVVEYDY 256