HHsearch alignment for GI: 254780998 and conserved domain: pfam01592
>pfam01592 NifU_N NifU-like N terminal domain. This domain is found in NifU in combination with pfam01106. This domain is found on isolated in several bacterial species. The nif genes are responsible for nitrogen fixation. However this domain is found in bacteria that do not fix nitrogen, so it may have a broader significance in the cell than nitrogen fixation. These proteins appear to be scaffold proteins for iron-sulfur clusters.
Probab=95.67 E-value=0.21 Score=29.72 Aligned_cols=116 Identities=13% Similarity=0.135 Sum_probs=73.5
Q ss_pred HHHHHHHHHCC---CCCHHHCCHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99999985089---999568681550226560167887304654548879999416269999999999999759988999
Q gi|254780998|r 22 HYLIELGKKLP---LFPKEYMTDQNIVAGCMSKLWMVIEWENKGDQDPIMIFYAVSDSQIVCGLLYIVKSIYAHKKISEI 98 (146)
Q Consensus 22 ~~Li~lgk~l~---~l~e~~k~~~~~V~GCqS~vWl~~~~~~~~~~~~~~~f~~dSda~IvkGl~~ll~~~~~g~t~~eI 98 (146)
T Consensus 4 e~ildh~~nPrn~G~l~~~~~~~~~~np~CGD~i~i~l~i~~~~~~I~di~F~~~G-Cais~AsaS~l~e~i~Gk~~~ea 82 (126)
T pfam01592 4 DKVLDHFKNPRNVGVLEEADAVGDVGSPACGDAMRLQIKVDEDTDRIEDAKFKTFG-CGSAIASSSALTELVKGKTLDEA 82 (126)
T ss_pred HHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEEEC-CHHHHHHHHHHHHHHCCCCHHHH
T ss_conf 89999867959899899998077747999774899999970799949998998637-68889999999999869939999
Q ss_pred HHCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8079899998709043169428999999999999999999963
Q gi|254780998|r 99 LKMDSLTILQHLGLTENLSQKRMNGLYTIVNKIQDLTQEYLNV 141 (146)
Q Consensus 99 ~~~d~~~f~~~lgL~~~Lt~~R~nGl~~m~~~ik~~a~~~l~~ 141 (146)
T Consensus 83 ~~i~~~~i~~~lg---~l~~~r~~Ca~La~~al~~av~~y~~r 122 (126)
T pfam01592 83 LKITNTDIAEELG---GLPPVKMHCSVLGDDALKAAIADYKGK 122 (126)
T ss_pred HHCCHHHHHHHHC---CCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8616999999973---799974008999999999999981761