Query gi|254780998|ref|YP_003065411.1| hypothetical protein CLIBASIA_04495 [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 146
No_of_seqs 106 out of 928
Neff 6.3
Searched_HMMs 23785
Date Tue May 31 23:59:16 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780998.hhm -d /home/congqian_1/database/pdb/pdb70.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ni7_A ER75, hypothetical prot 100.0 0 0 312.6 13.0 137 2-142 15-151 (155)
2 3g0m_A Cysteine desulfuration 100.0 1.4E-45 0 305.5 16.1 132 3-138 9-140 (141)
3 1wlo_A SUFE protein; structura 100.0 3.9E-41 1.4E-45 276.2 8.8 134 1-141 1-136 (136)
4 2z7e_A ISCU protein, NIFU-like 92.0 0.54 2.3E-05 25.8 7.0 110 22-135 7-123 (157)
5 3lvl_A NIFU-like protein; prot 83.9 2.4 0.0001 21.8 11.0 114 22-141 6-125 (129)
6 1sh7_A Extracellular subtilisi 64.3 4.5 0.00019 20.1 3.1 37 65-101 211-248 (284)
7 2b6n_A Proteinase K; S binding 59.8 6.1 0.00026 19.2 3.1 36 66-101 216-252 (278)
8 2ixt_A 36KDA protease; serine 59.5 6.3 0.00027 19.2 3.1 36 66-101 242-278 (310)
9 2qtw_B Proprotein convertase s 56.4 9 0.00038 18.2 3.5 36 66-101 226-262 (546)
10 2iy9_A SUBA; toxin, shiga, pla 54.8 8.1 0.00034 18.5 3.0 35 67-101 265-300 (347)
11 1to2_E Subtilisin BPN'; serine 52.8 9.5 0.0004 18.1 3.1 36 66-101 213-249 (281)
12 1gci_A Subtilisin; hydrolase, 51.8 10 0.00042 17.9 3.1 36 66-101 207-243 (269)
13 1r0r_E Subtilisin carlsberg; h 51.4 10 0.00043 17.8 3.1 36 66-101 212-248 (274)
14 1y9z_A Alkaline serine proteas 51.3 10 0.00042 17.9 3.0 32 70-101 365-397 (441)
15 2oxa_A Extracellular serine pr 50.5 11 0.00045 17.7 3.0 33 69-101 331-364 (600)
16 2qq4_A Iron-sulfur cluster bio 49.1 14 0.00059 17.0 10.1 85 22-110 10-97 (138)
17 1p8j_A Furin precursor; prohor 46.8 13 0.00056 17.1 3.1 34 68-101 255-289 (471)
18 2id4_A Kexin; KEX2, kexin, fur 44.2 15 0.00065 16.7 3.1 34 68-101 266-300 (503)
19 1r6v_A Subtilisin-like serine 41.5 18 0.00076 16.3 3.1 34 68-101 375-409 (671)
20 3afg_A Subtilisin-like serine 38.9 20 0.00085 16.0 3.1 36 66-101 351-387 (539)
21 3i6s_A Subtilisin-like proteas 32.6 25 0.0011 15.4 3.1 33 69-101 421-454 (649)
22 2hl7_A Cytochrome C-type bioge 31.5 27 0.0011 15.3 3.3 43 72-118 38-81 (84)
23 3f7m_A Alkaline serine proteas 29.1 29 0.0012 15.1 2.5 36 66-101 217-253 (279)
24 2x8j_A Intracellular subtilisi 28.8 30 0.0012 15.0 4.6 37 65-101 241-283 (327)
25 2pwa_A Proteinase K; structure 24.2 31 0.0013 14.8 1.9 35 66-100 216-251 (279)
26 1xjs_A NIFU-like protein; SR17 22.7 38 0.0016 14.3 8.3 90 16-110 6-99 (147)
27 2p4e_P Proprotein convertase s 20.8 17 0.00071 16.5 0.0 34 68-101 380-414 (692)
No 1
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=100.00 E-value=0 Score=312.57 Aligned_cols=137 Identities=28% Similarity=0.510 Sum_probs=131.1
Q ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHHH
Q ss_conf 88899999875099989999999999850899995686815502265601678873046545488799994162699999
Q gi|254780998|r 2 IPINDIIEDMEMIEDLHDRYHYLIELGKKLPLFPKEYMTDQNIVAGCMSKLWMVIEWENKGDQDPIMIFYAVSDSQIVCG 81 (146)
Q Consensus 2 ~~l~~i~e~f~~~~d~~~ry~~Li~lgk~l~~l~e~~k~~~~~V~GCqS~vWl~~~~~~~~~~~~~~~f~~dSda~IvkG 81 (146)
|++++|+++|+.|+||++||+|||++||++|++|+++|+++|+|+||||+|||+++.+ ++|+++|+|||||.||||
T Consensus 15 ~~~~~i~e~f~~~~dwedry~~Li~lgk~l~~l~e~~k~d~n~V~GCqS~vWl~~~~~----~~g~~~f~~dSDa~IvkG 90 (155)
T 1ni7_A 15 VTAETLRNTFAPLTQWEDKYRQLIMLGKQLPALPDELKAQAKEIAGCENRVWLGYTVA----ENGKMHFFGDSEGRIVRG 90 (155)
T ss_dssp SCHHHHHHHHTTCCSHHHHHHHHHHHHHHSCCCCHHHHHHSEEECSSSSCEEEECCCC----SSSCCCCEEEESSHHHHH
T ss_pred CCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHCHHHCCCCCCEEEEEEEEEC----CCCEEEEEECCCHHHHHH
T ss_conf 6899999999818999999999999884299999689554525067613688888862----697799984253399999
Q ss_pred HHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999975998899980798999987090431694289999999999999999999633
Q gi|254780998|r 82 LLYIVKSIYAHKKISEILKMDSLTILQHLGLTENLSQKRMNGLYTIVNKIQDLTQEYLNVH 142 (146)
Q Consensus 82 l~~ll~~~~~g~t~~eI~~~d~~~f~~~lgL~~~Lt~~R~nGl~~m~~~ik~~a~~~l~~~ 142 (146)
|++||+.+|||+||+||++++|.+|++++||.++|||+|+|||++|+++||++|++++.-+
T Consensus 91 l~aiL~~~~~g~t~~eI~~~~~~~~~~~lGL~~~LS~sR~NGl~~mi~~Ik~~a~~~l~~~ 151 (155)
T 1ni7_A 91 LLAVLLTAVEGKTAAELQAQSPLALFDELGLRAQLSASRSQGLNALSEAIIAATKQVLEHH 151 (155)
T ss_dssp HHHHHHHHTTTCCHHHHHHSCTHHHHHHHTSSSSSCHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHCCCCHHHHHHCCHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999987999999985698999987687400682189999999999999999998742
No 2
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national institute of allergy and infectious diseases, niaid, hydrolase; 1.76A {Salmonella typhimurium LT2} PDB: 1mzg_A
Probab=100.00 E-value=1.4e-45 Score=305.53 Aligned_cols=132 Identities=23% Similarity=0.487 Sum_probs=126.6
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHH
Q ss_conf 88999998750999899999999998508999956868155022656016788730465454887999941626999999
Q gi|254780998|r 3 PINDIIEDMEMIEDLHDRYHYLIELGKKLPLFPKEYMTDQNIVAGCMSKLWMVIEWENKGDQDPIMIFYAVSDSQIVCGL 82 (146)
Q Consensus 3 ~l~~i~e~f~~~~d~~~ry~~Li~lgk~l~~l~e~~k~~~~~V~GCqS~vWl~~~~~~~~~~~~~~~f~~dSda~IvkGl 82 (146)
+.++|+++|+.|+||++||+|||++||++|++|+++|+++|+|+||||+|||+++.+ .+|+++|+|||||.||||+
T Consensus 9 ~~~~iie~f~~~~dwe~ry~~Li~lgk~l~~l~~~~r~~~n~V~GCqS~vWl~~~~~----~~g~~~f~~dSda~IvkGl 84 (141)
T 3g0m_A 9 DKEKLLRNFTRCANWEEKYLYIIELGQRLAELNPQDRNPQNTIHGCQSQVWIVMRRN----ANGIIELQGDSDAAIVKGL 84 (141)
T ss_dssp CHHHHHHHHHTCCSHHHHHHHHHHHHHTSCCCCGGGCSGGGBCCSSSSCEEEEEEEC----TTSBEEEEEEESSHHHHHH
T ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCCCCEEEEEEEEEC----CCCCEEEEECCCHHHHHHH
T ss_conf 099999999859999999999999883599999689146754246721588888874----8972688744720999999
Q ss_pred HHHHHHHHCCCCHHHHHHCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999997599889998079899998709043169428999999999999999999
Q gi|254780998|r 83 LYIVKSIYAHKKISEILKMDSLTILQHLGLTENLSQKRMNGLYTIVNKIQDLTQEY 138 (146)
Q Consensus 83 ~~ll~~~~~g~t~~eI~~~d~~~f~~~lgL~~~Lt~~R~nGl~~m~~~ik~~a~~~ 138 (146)
++||+.+|||.||+||+++||..||+++||.+||||+|+|||.+|+++||.+|+++
T Consensus 85 ~ail~~~~~g~tp~eI~~~d~~~~~~~lgL~~~Ls~~R~nGl~~mi~~ik~~A~~l 140 (141)
T 3g0m_A 85 MAVVFILYHQMTAQDIVHFDVRPWFEKMALAQHLTPSRSQGLEAMIRAIRAKAATL 140 (141)
T ss_dssp HHHHHHHHTTCBHHHHHHCCCHHHHHHHTCGGGSCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHCCCCHHHHHHCCHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999998799999998579799998848750068418899999999999999971
No 3
>1wlo_A SUFE protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus HB8}
Probab=100.00 E-value=3.9e-41 Score=276.20 Aligned_cols=134 Identities=16% Similarity=0.274 Sum_probs=122.4
Q ss_pred CC--CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEECCHHHH
Q ss_conf 98--8899999875099989999999999850899995686815502265601678873046545488799994162699
Q gi|254780998|r 1 MI--PINDIIEDMEMIEDLHDRYHYLIELGKKLPLFPKEYMTDQNIVAGCMSKLWMVIEWENKGDQDPIMIFYAVSDSQI 78 (146)
Q Consensus 1 M~--~l~~i~e~f~~~~d~~~ry~~Li~lgk~l~~l~e~~k~~~~~V~GCqS~vWl~~~~~~~~~~~~~~~f~~dSda~I 78 (146)
|+ ++++|+++|+.+++ ++||+|||++|++++++|++ +++|+|+||||+|||.++.++ +.++++|.|||||.|
T Consensus 1 m~p~kl~~iie~F~~l~~-eery~~Li~lgk~l~~~~~~--~~~n~V~GCqS~vWl~~~~~~---~~~~~~f~~dSda~i 74 (136)
T 1wlo_A 1 MVPPKLKQALELFKSLPK-ELRSQVLLEYAAKVPPPPPG--VELERVHECQTPFFVHADVEG---GKVRLYFHVPDEAPT 74 (136)
T ss_dssp CCCHHHHHHHHHHHHSCH-HHHHHHHHHHHHTCCCCCSS--CCCEECTTSSSCCEEEEEEET---TEEEEEEECSSCCHH
T ss_pred CCCHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHCCCHHH--HHHCCCCCCCCCEEEEEEECC---CCEEEEEEEECCHHH
T ss_conf 997899999999984998-99999999999886303333--133016767765689999618---815899986331199
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999997599889998079899998709043169428999999999999999999963
Q gi|254780998|r 79 VCGLLYIVKSIYAHKKISEILKMDSLTILQHLGLTENLSQKRMNGLYTIVNKIQDLTQEYLNV 141 (146)
Q Consensus 79 vkGl~~ll~~~~~g~t~~eI~~~d~~~f~~~lgL~~~Lt~~R~nGl~~m~~~ik~~a~~~l~~ 141 (146)
|||+++||+.+|||+||+||+++++ +|++++||+++|||+|+|||.+|+++||.+|+++++.
T Consensus 75 vkGl~ail~~~~~g~t~eei~~~~~-~~~~~lgL~~~Ls~~R~nGl~~mi~~ik~~a~~~las 136 (136)
T 1wlo_A 75 VKAFAGLLREGLEGESPEAVLEVPP-GFYRGYGLEEFFTPLRLRGLEAALLRLQAQVRKALTS 136 (136)
T ss_dssp HHHHHHHHHHTTTTCCTTTTTSSCT-TTTTTTTSHHHHTHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHCCH-HHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8899999999991899999985999-9998768351167318999999999999999998539
No 4
>2z7e_A ISCU protein, NIFU-like protein; iron-sulfur cluster, iron, biosynthesis, [2Fe-2S], asymmetric trimer, three conserved Cys; 2.30A {Aquifex aeolicus}
Probab=91.99 E-value=0.54 Score=25.81 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=68.2
Q ss_pred HHHHHHHHHCC---CCCHHHCCHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99999985089---999568681550226560167887304654548879999416269999999999999759988999
Q gi|254780998|r 22 HYLIELGKKLP---LFPKEYMTDQNIVAGCMSKLWMVIEWENKGDQDPIMIFYAVSDSQIVCGLLYIVKSIYAHKKISEI 98 (146)
Q Consensus 22 ~~Li~lgk~l~---~l~e~~k~~~~~V~GCqS~vWl~~~~~~~~~~~~~~~f~~dSda~IvkGl~~ll~~~~~g~t~~eI 98 (146)
+-|+++.+... .+++..-.-.-.-+.|-..+.+...++...+.-.-+.|.+..=+ |...-+++++...-|++.+|+
T Consensus 7 e~Ildh~~nP~n~G~le~~~~~~~~~np~CGD~i~i~l~Id~e~~~I~di~f~~~GCa-is~AsaSil~e~i~Gktl~ea 85 (157)
T 2z7e_A 7 EKVLDHFLNPRNVGVLEDANGVGQCGNPACGAAMLFTIKVNPENDVIEDVRFKTFGCG-SAIAVSSMLTEMVKGKPIQYA 85 (157)
T ss_dssp HHHHHHHHSCSSBSCCTTCSEEEEEEETTTTEEEEEEEEECTTTCBEEEEEEEEESCT-THHHHHHHHHHHHTTSBHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEEEEEEEECCCCEEEEEEEEECCCH-HHHHHHHHHHHHHCCCCHHHH
T ss_conf 9999998695888989999979885899985779999999559997978899976875-667899999999769959999
Q ss_pred HHCCHHHHHHHHCCHHCCCHHHHH----HHHHHHHHHHHHH
Q ss_conf 807989999870904316942899----9999999999999
Q gi|254780998|r 99 LKMDSLTILQHLGLTENLSQKRMN----GLYTIVNKIQDLT 135 (146)
Q Consensus 99 ~~~d~~~f~~~lgL~~~Lt~~R~n----Gl~~m~~~ik~~a 135 (146)
.+++..+.++.+| .|.|.|.. ++.++..-++.+.
T Consensus 86 ~~I~~~~i~e~Lg---~lpp~R~~CA~La~~Al~~Al~dy~ 123 (157)
T 2z7e_A 86 LNLTYKDIFEELG---GLPPQKIHCTNLGLETLHVAIKDYL 123 (157)
T ss_dssp HHCCHHHHHHHHT---CCCCSSCCTTCCHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHC---CCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8512589999866---9995314299999999999999999
No 5
>3lvl_A NIFU-like protein; protein-protein complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PLP; 3.00A {Escherichia coli} PDB: 1q48_A 1r9p_A 1wfz_A
Probab=83.94 E-value=2.4 Score=21.79 Aligned_cols=114 Identities=12% Similarity=0.087 Sum_probs=74.6
Q ss_pred HHHHHHHHHCC---CCCHHHCC-HHH--HHCCCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCH
Q ss_conf 99999985089---99956868-155--0226560167887304654548879999416269999999999999759988
Q gi|254780998|r 22 HYLIELGKKLP---LFPKEYMT-DQN--IVAGCMSKLWMVIEWENKGDQDPIMIFYAVSDSQIVCGLLYIVKSIYAHKKI 95 (146)
Q Consensus 22 ~~Li~lgk~l~---~l~e~~k~-~~~--~V~GCqS~vWl~~~~~~~~~~~~~~~f~~dSda~IvkGl~~ll~~~~~g~t~ 95 (146)
+-++++.+... .+++.... ... .=+.|--.+.|...+++.+. -.-+.|.+..= .|...-++++++.+.|+|.
T Consensus 6 e~Ildh~~nP~n~G~l~~~d~~~~~~~~~np~CGD~i~i~l~i~~~~i-I~di~F~~~GC-~is~Asas~~~e~i~Gkt~ 83 (129)
T 3lvl_A 6 EKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQIKVNDEGI-IEDARFKTYGC-GSAIASSSLVTEWVKGKSL 83 (129)
T ss_dssp HHHHHHHHSCSSBSCCCTTCSSEEEEEEECTTTCCEEEEEEEECSSSC-EEEEEEEEESC-HHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCE-EEEEEEEECCC-HHHHHHHHHHHHHHCCCCH
T ss_conf 999998769498888998420023455589987738999999737855-87787773588-8999999999999859969
Q ss_pred HHHHHCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9998079899998709043169428999999999999999999963
Q gi|254780998|r 96 SEILKMDSLTILQHLGLTENLSQKRMNGLYTIVNKIQDLTQEYLNV 141 (146)
Q Consensus 96 ~eI~~~d~~~f~~~lgL~~~Lt~~R~nGl~~m~~~ik~~a~~~l~~ 141 (146)
+|+..++..+.++.++ +.|+|.+=-.--...++.....+.++
T Consensus 84 ~ea~~i~~~~i~~~l~----~~p~r~~Ca~L~~~al~~al~~y~~k 125 (129)
T 3lvl_A 84 DEAQAIKNTDIAEELE----LPPVKIHCSILAEDAIKAAIADYKSK 125 (129)
T ss_dssp HHHHTCCHHHHHHHHT----CCGGGGHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHCCHHHHHHHHC----CCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9998653689998733----78751209999999999999999987
No 6
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, calcium depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=64.34 E-value=4.5 Score=20.05 Aligned_cols=37 Identities=8% Similarity=-0.048 Sum_probs=30.8
Q ss_pred CCEEEEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 887999941626-9999999999999759988999807
Q gi|254780998|r 65 DPIMIFYAVSDS-QIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 65 ~~~~~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
.+...+.|.|-| ++|-|+++++.+.+-+.+|+||.++
T Consensus 211 ~~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~i~~~ 248 (284)
T 1sh7_A 211 GGYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGL 248 (284)
T ss_dssp SSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred CCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 97585688616889999999999987889999999999
No 7
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=59.80 E-value=6.1 Score=19.24 Aligned_cols=36 Identities=8% Similarity=0.043 Sum_probs=28.9
Q ss_pred CEEEEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 87999941626-9999999999999759988999807
Q gi|254780998|r 66 PIMIFYAVSDS-QIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 66 ~~~~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
....+.|.|=| ++|.|+++++.+.+-..+|+||.++
T Consensus 216 ~~~~~~GTS~AaP~VaG~aAll~~~~p~lt~~~i~~~ 252 (278)
T 2b6n_A 216 ATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNL 252 (278)
T ss_dssp CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 6556777317899999999999987889899999999
No 8
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=59.46 E-value=6.3 Score=19.15 Aligned_cols=36 Identities=11% Similarity=-0.047 Sum_probs=29.3
Q ss_pred CEEEEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 87999941626-9999999999999759988999807
Q gi|254780998|r 66 PIMIFYAVSDS-QIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 66 ~~~~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
+...+.|.|-| ++|-|+++++.+.+-..++.||+++
T Consensus 242 ~~~~~sGTS~AaP~VaG~~All~~~~p~lt~~~v~~~ 278 (310)
T 2ixt_A 242 GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSN 278 (310)
T ss_dssp SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred CEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 5022688889899999999999987889999999999
No 9
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholesterolemia, low density lipoprotein receptor, alternative splicing; HET: NAG; 1.90A {Homo sapiens} PDB: 3bps_A 3gcw_A 3gcx_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2w2o_A
Probab=56.42 E-value=9 Score=18.21 Aligned_cols=36 Identities=14% Similarity=0.120 Sum_probs=28.9
Q ss_pred CEEEEEECCH-HHHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 8799994162-69999999999999759988999807
Q gi|254780998|r 66 PIMIFYAVSD-SQIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 66 ~~~~f~~dSd-a~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
+-..+.|.|= |++|-|+++||+..+-..+|.||.+.
T Consensus 226 ~y~~~sGTS~AaP~VAG~aALlls~~P~lt~~~vk~~ 262 (546)
T 2qtw_B 226 CFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQR 262 (546)
T ss_dssp CEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 1898367899899999999999986889999999999
No 10
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=54.83 E-value=8.1 Score=18.47 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=28.3
Q ss_pred EEEEEECCH-HHHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 799994162-69999999999999759988999807
Q gi|254780998|r 67 IMIFYAVSD-SQIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 67 ~~~f~~dSd-a~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
.-.+.|.|= |++|-|+++++...+-..+|++|+++
T Consensus 265 y~~~sGTS~AaP~VaG~aALl~~~~p~lt~~~i~~~ 300 (347)
T 2iy9_A 265 TGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRT 300 (347)
T ss_dssp EEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 434786779899999999999987889999999999
No 11
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=52.84 E-value=9.5 Score=18.06 Aligned_cols=36 Identities=11% Similarity=0.023 Sum_probs=29.3
Q ss_pred CEEEEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 87999941626-9999999999999759988999807
Q gi|254780998|r 66 PIMIFYAVSDS-QIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 66 ~~~~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
+...+.|.|-| ++|-|+++++...+-..+++||.++
T Consensus 213 ~~~~~~GTS~AaP~vaG~~All~~~~p~lt~~~i~~~ 249 (281)
T 1to2_E 213 KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSS 249 (281)
T ss_dssp EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 2675245126888999999999987879999999999
No 12
>1gci_A Subtilisin; hydrolase, serine protease, ultra-high resolution; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=51.75 E-value=10 Score=17.92 Aligned_cols=36 Identities=17% Similarity=0.038 Sum_probs=28.8
Q ss_pred CEEEEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 87999941626-9999999999999759988999807
Q gi|254780998|r 66 PIMIFYAVSDS-QIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 66 ~~~~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
+...+.|.|=| ++|-|++++|.+.+-..++.+|.++
T Consensus 207 ~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~i~~~ 243 (269)
T 1gci_A 207 TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNH 243 (269)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 6586788750369999999999987889999999999
No 13
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A 1vsb_A* 3vsb_A* ...
Probab=51.43 E-value=10 Score=17.84 Aligned_cols=36 Identities=14% Similarity=0.070 Sum_probs=29.6
Q ss_pred CEEEEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 87999941626-9999999999999759988999807
Q gi|254780998|r 66 PIMIFYAVSDS-QIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 66 ~~~~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
+...+.|.|=| ++|-|+++++.+.+-..+|.+|.++
T Consensus 212 ~~~~~~GTS~AaP~VaG~~All~~~~p~lt~~~ik~~ 248 (274)
T 1r0r_E 212 TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNR 248 (274)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred CEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 7164688752018899999999988889899999999
No 14
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain, hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=51.29 E-value=10 Score=17.91 Aligned_cols=32 Identities=19% Similarity=0.150 Sum_probs=26.9
Q ss_pred EEECCH-HHHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 994162-69999999999999759988999807
Q gi|254780998|r 70 FYAVSD-SQIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 70 f~~dSd-a~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
+.|.|= |++|-|.+|||.+.+-..+|.+|+++
T Consensus 365 ~sGTSMAaP~VAG~aALl~q~~P~~s~~~ik~~ 397 (441)
T 1y9z_A 365 YNGTSMATPHVSGVATLVWSYHPECSASQVRAA 397 (441)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHH
T ss_pred ECCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 723899899999999999998889999999999
No 15
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=50.46 E-value=11 Score=17.75 Aligned_cols=33 Identities=12% Similarity=0.332 Sum_probs=27.5
Q ss_pred EEEECCH-HHHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 9994162-69999999999999759988999807
Q gi|254780998|r 69 IFYAVSD-SQIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 69 ~f~~dSd-a~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
.|.|.|= |++|.|.+||+++.+-..++.||+.+
T Consensus 331 ~~sGTS~AaP~VaGvaALll~~~P~lt~~~v~~~ 364 (600)
T 2oxa_A 331 VMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDL 364 (600)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHH
T ss_pred EECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 2036653105678999999987839899999999
No 16
>2qq4_A Iron-sulfur cluster biosynthesis protein ISCU; zinc binding, iron-sulfur cluster binding, three conserved Cys, three beta strands; 1.85A {Thermus thermophilus}
Probab=49.12 E-value=14 Score=16.99 Aligned_cols=85 Identities=12% Similarity=0.147 Sum_probs=55.8
Q ss_pred HHHHHHHHHCC---CCCHHHCCHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf 99999985089---999568681550226560167887304654548879999416269999999999999759988999
Q gi|254780998|r 22 HYLIELGKKLP---LFPKEYMTDQNIVAGCMSKLWMVIEWENKGDQDPIMIFYAVSDSQIVCGLLYIVKSIYAHKKISEI 98 (146)
Q Consensus 22 ~~Li~lgk~l~---~l~e~~k~~~~~V~GCqS~vWl~~~~~~~~~~~~~~~f~~dSda~IvkGl~~ll~~~~~g~t~~eI 98 (146)
+-|+|+.+... .+++....-..+=+.|=..+=|...+++.... -+.|.+.+= .|...=++++++...|++.+|+
T Consensus 10 ~~Ildh~~nP~n~g~l~~~~~~~~~~np~CGD~i~i~l~i~~~~I~--d~~f~~~GC-ai~~ASas~l~e~i~gk~~~ea 86 (138)
T 2qq4_A 10 EILLDHYQSPRNFGVLPQATKQAGGMNPSCGDQVEVMVLLEGDTIA--DIRFQGQGC-AISTASASLMTEAVKGKKVAEA 86 (138)
T ss_dssp HHHHHHHHSCTTBSCCTTCSEEEEEECTTTCCEEEEEEEEETTEEE--EEEEEEECC-HHHHHHHHHHHHHHTTSBHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEEEEEECCCEEE--EEEEEECCC-HHHHHHHHHHHHHHCCCCHHHH
T ss_conf 9999998598988989999956553799987689999997376788--888996485-8999999999999849999999
Q ss_pred HHCCHHHHHHHH
Q ss_conf 807989999870
Q gi|254780998|r 99 LKMDSLTILQHL 110 (146)
Q Consensus 99 ~~~d~~~f~~~l 110 (146)
..+. ..|...+
T Consensus 87 ~~l~-~~~~~~~ 97 (138)
T 2qq4_A 87 LELS-RKFQAMV 97 (138)
T ss_dssp HHHH-HHHHHHH
T ss_pred HHHH-HHHHHHH
T ss_conf 9999-9999999
No 17
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain, hydrolase; HET: DKA MAI NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=46.78 E-value=13 Score=17.14 Aligned_cols=34 Identities=9% Similarity=0.144 Sum_probs=28.3
Q ss_pred EEEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 999941626-9999999999999759988999807
Q gi|254780998|r 68 MIFYAVSDS-QIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 68 ~~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
..+.|.|=| ++|-|.+||+.+.+-..++.+|+.+
T Consensus 255 ~~~sGTS~AaP~VAG~aALl~~~~P~lt~~~v~~i 289 (471)
T 1p8j_A 255 ESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHL 289 (471)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 47687875216788999999977889789999999
No 18
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, subtilisin like protease, serine protease, hydrolase; HET: LYM NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=44.19 E-value=15 Score=16.74 Aligned_cols=34 Identities=6% Similarity=0.081 Sum_probs=27.9
Q ss_pred EEEEECCH-HHHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 99994162-69999999999999759988999807
Q gi|254780998|r 68 MIFYAVSD-SQIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 68 ~~f~~dSd-a~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
-.|.|.|- |++|-|.+||+++.+-..++.||..+
T Consensus 266 ~~~sGTS~AaP~VaGv~AL~l~anP~Lt~~~v~~i 300 (503)
T 2id4_A 266 NSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYL 300 (503)
T ss_dssp EEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 78897775116676999999976889899999999
No 19
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=41.48 E-value=18 Score=16.32 Aligned_cols=34 Identities=18% Similarity=0.226 Sum_probs=27.7
Q ss_pred EEEEECCH-HHHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 99994162-69999999999999759988999807
Q gi|254780998|r 68 MIFYAVSD-SQIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 68 ~~f~~dSd-a~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
-.+.|.|= +++|-|++||+.+.+-..+|.||.++
T Consensus 375 ~~~sGTS~AaP~VAG~aALl~~~~P~lt~~~v~~~ 409 (671)
T 1r6v_A 375 DYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKL 409 (671)
T ss_dssp EEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred EEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 88727530578999999999987889999999999
No 20
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=38.87 E-value=20 Score=16.00 Aligned_cols=36 Identities=6% Similarity=-0.067 Sum_probs=29.6
Q ss_pred CEEEEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 87999941626-9999999999999759988999807
Q gi|254780998|r 66 PIMIFYAVSDS-QIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 66 ~~~~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
+...+.|.|=| ++|.|+++++.+.+-..+|.+|.++
T Consensus 351 ~~~~~sGTS~AaP~VaG~aALl~~~~p~lt~~~ik~~ 387 (539)
T 3afg_A 351 YYTAAPGTAMATPHVAGIAALLLQAHPSWTPDKVKTA 387 (539)
T ss_dssp SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHH
T ss_pred CEEECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 1020257543320699999999987889999999999
No 21
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=32.56 E-value=25 Score=15.38 Aligned_cols=33 Identities=15% Similarity=0.060 Sum_probs=27.4
Q ss_pred EEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 99941626-9999999999999759988999807
Q gi|254780998|r 69 IFYAVSDS-QIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 69 ~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
.+.|.|=| +.|.|.+||+.+.+-..+|.+|.++
T Consensus 421 ~~sGTSMAaP~VAGvaALl~q~~p~~sp~~ik~~ 454 (649)
T 3i6s_A 421 LESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSA 454 (649)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHH
T ss_pred EECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 8317765665302489999977778999999999
No 22
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=31.45 E-value=27 Score=15.26 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=32.8
Q ss_pred ECCHHHHHHHHHHHHHH-HHCCCCHHHHHHCCHHHHHHHHCCHHCCCH
Q ss_conf 41626999999999999-975998899980798999987090431694
Q gi|254780998|r 72 AVSDSQIVCGLLYIVKS-IYAHKKISEILKMDSLTILQHLGLTENLSQ 118 (146)
Q Consensus 72 ~dSda~IvkGl~~ll~~-~~~g~t~~eI~~~d~~~f~~~lgL~~~Lt~ 118 (146)
.+|+|.+.+-+-..+.. +-+|+|.+||.++ |.+..|=.-.+.|
T Consensus 38 ~~S~s~~A~dmr~~I~~~i~~G~sd~eI~~~----l~~rYG~~Il~~P 81 (84)
T 2hl7_A 38 ADSNAPIAADLRKQIYGQLQQGKSDGEIVDY----MVARYGDFVRYKP 81 (84)
T ss_dssp TTCCSHHHHHHHHHHHHHHHHTCCHHHHHHH----HHHHHTTTCEECC
T ss_pred HCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH----HHHHCCCEEEEEC
T ss_conf 0078789999999999999969999999999----9986288386419
No 23
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} PDB: 3f7o_A
Probab=29.08 E-value=29 Score=15.07 Aligned_cols=36 Identities=8% Similarity=-0.040 Sum_probs=27.0
Q ss_pred CEEEEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 87999941626-9999999999999759988999807
Q gi|254780998|r 66 PIMIFYAVSDS-QIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 66 ~~~~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
+...+.|.|=| ++|-|++++|.......+++++..+
T Consensus 217 ~y~~~sGTS~AaP~VaG~~All~~~~p~~~~~~~~~l 253 (279)
T 3f7m_A 217 RTNTISGTSMATPHIAGLAAYLFGLEGGSAGAMCGRI 253 (279)
T ss_dssp CEEEECSHHHHHHHHHHHHHHHHHHTCCCTTTHHHHH
T ss_pred CEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf 3663481859899999999999856899859999999
No 24
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii}
Probab=28.79 E-value=30 Score=14.98 Aligned_cols=37 Identities=14% Similarity=0.105 Sum_probs=29.2
Q ss_pred CCEEEEEECCHH-HHHHHHHHHHHHHHC-----CCCHHHHHHC
Q ss_conf 887999941626-999999999999975-----9988999807
Q gi|254780998|r 65 DPIMIFYAVSDS-QIVCGLLYIVKSIYA-----HKKISEILKM 101 (146)
Q Consensus 65 ~~~~~f~~dSda-~IvkGl~~ll~~~~~-----g~t~~eI~~~ 101 (146)
.+.-.+.|.|-| ++|-|+++++.+.+- ..+|.+|..+
T Consensus 241 ~~~~~~sGTS~AaP~VaG~aALl~~~~p~~~~~~lt~~~i~~~ 283 (327)
T 2x8j_A 241 SGYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQ 283 (327)
T ss_dssp TCEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
T ss_conf 9853378738989999999999987390002689899999999
No 25
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3dyb_A* 3gt3_A* 3gt4_A* 3dw3_X 1bjr_E 1cnm_A 1oyo_A* ...
Probab=24.23 E-value=31 Score=14.81 Aligned_cols=35 Identities=14% Similarity=0.002 Sum_probs=26.7
Q ss_pred CEEEEEECCHH-HHHHHHHHHHHHHHCCCCHHHHHH
Q ss_conf 87999941626-999999999999975998899980
Q gi|254780998|r 66 PIMIFYAVSDS-QIVCGLLYIVKSIYAHKKISEILK 100 (146)
Q Consensus 66 ~~~~f~~dSda-~IvkGl~~ll~~~~~g~t~~eI~~ 100 (146)
+...+.|.|=| ++|-|++++|.+.+...+++++..
T Consensus 216 ~~~~~sGTS~AaP~VaG~~All~~~~p~~~~~~~~~ 251 (279)
T 2pwa_A 216 STRSISGTSMATPHVAGLAAYLMTLGKTTAASACRY 251 (279)
T ss_dssp EEEEECSHHHHHHHHHHHHHHHHHTTSCCTTTHHHH
T ss_pred CEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_conf 043068572889999999999997089985999999
No 26
>1xjs_A NIFU-like protein; SR17, structure, autostructure, iron-sulfur, zinc, northeast structural genomics consortium, NESG; NMR {Bacillus subtilis} SCOP: d.224.1.2 PDB: 2azh_A
Probab=22.75 E-value=38 Score=14.28 Aligned_cols=90 Identities=13% Similarity=0.122 Sum_probs=58.5
Q ss_pred CHHHHH-HHHHHHHHHCC---CCCHHHCCHHHHHCCCCEEEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHC
Q ss_conf 989999-99999985089---99956868155022656016788730465454887999941626999999999999975
Q gi|254780998|r 16 DLHDRY-HYLIELGKKLP---LFPKEYMTDQNIVAGCMSKLWMVIEWENKGDQDPIMIFYAVSDSQIVCGLLYIVKSIYA 91 (146)
Q Consensus 16 d~~~ry-~~Li~lgk~l~---~l~e~~k~~~~~V~GCqS~vWl~~~~~~~~~~~~~~~f~~dSda~IvkGl~~ll~~~~~ 91 (146)
|.++-| +-|+++++... .+++.. .-+-.=+-|=..+=|...+++... ..+.|.+..=+ |...=++++.+...
T Consensus 6 ~l~~lY~e~Ildh~~nP~n~g~l~~~~-~~~~~Np~CGD~i~i~l~i~~~~I--~d~~f~~~GCa-i~~ASasil~e~~~ 81 (147)
T 1xjs_A 6 NLDTLYRQVIMDHYKNPRNKGVLNDSI-VVDMNNPTCGDRIRLTMKLDGDIV--EDAKFEGEGCS-ISMASASMMTQAIK 81 (147)
T ss_dssp TTHHHHHHHHHHHHHSCCCCCCCCSSE-EEEEEETTTTEEEEEEEECCSSBC--CEEEEEEESSH-HHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCC-EEEECCCCCCEEEEEEEEECCCEE--EEEEEEECCCH-HHHHHHHHHHHHHC
T ss_conf 299999999999985968889799987-642079998618999999828977--88677856749-89999999999985
Q ss_pred CCCHHHHHHCCHHHHHHHH
Q ss_conf 9988999807989999870
Q gi|254780998|r 92 HKKISEILKMDSLTILQHL 110 (146)
Q Consensus 92 g~t~~eI~~~d~~~f~~~l 110 (146)
|++.+|+..+ ...|.+.+
T Consensus 82 gk~~~ea~~l-~~~~~~~l 99 (147)
T 1xjs_A 82 GKDIETALSM-SKIFSDMM 99 (147)
T ss_dssp TSBHHHHHHH-HHHHHHHH
T ss_pred CCCHHHHHHH-HHHHHHHH
T ss_conf 9989999999-99999986
No 27
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrolase; 1.98A {Homo sapiens}
Probab=20.79 E-value=17 Score=16.49 Aligned_cols=34 Identities=15% Similarity=0.147 Sum_probs=27.5
Q ss_pred EEEEECCH-HHHHHHHHHHHHHHHCCCCHHHHHHC
Q ss_conf 99994162-69999999999999759988999807
Q gi|254780998|r 68 MIFYAVSD-SQIVCGLLYIVKSIYAHKKISEILKM 101 (146)
Q Consensus 68 ~~f~~dSd-a~IvkGl~~ll~~~~~g~t~~eI~~~ 101 (146)
..+.|.|= +++|-|+++++...+-..||.+|.+.
T Consensus 380 ~~~SGTSmAaP~VAGvaALlls~~P~lTpa~Vk~~ 414 (692)
T 2p4e_P 380 VSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQR 414 (692)
T ss_dssp -----------------------------------
T ss_pred EECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 98269899899999999999997889999999999
Done!