BLAST/PSIBLAST alignment of GI: 254780998 and GI: 116251148 at iteration 1
>gi|116251148|ref|YP_766986.1| hypothetical protein RL1380 [Rhizobium leguminosarum bv. viciae 3841] Length = 145
>gi|115255796|emb|CAK06877.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 145
 Score =  119 bits (298), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 84/134 (62%), Gaps = 3/134 (2%)

Query: 1   MIPINDIIEDMEMIEDLHDRYHYLIELGKKLPLFPKEYMTDQNIVAGCMSKLWMVIEWEN 60
           M  ++ II+D   ++D  DRY Y+IELGK LP   +E  T +N V GC S++W+V     
Sbjct: 6   MASLDQIIDDFAFLDDWEDRYRYVIELGKALPDLAEEKRTSENKVMGCASQVWLVTH--T 63

Query: 61  KGDQD-PIMIFYAVSDSQIVCGLLYIVKSIYAHKKISEILKMDSLTILQHLGLTENLSQK 119
            GD D P+M F   SD+ IV GL+ IV + Y+ K  SEI  +D+  I   +GL ENLS +
Sbjct: 64  TGDPDNPVMSFEGDSDAHIVRGLVAIVLATYSGKTASEIAGLDAFEIFSKIGLVENLSSQ 123

Query: 120 RMNGLYTIVNKIQD 133
           R NGL ++VN+I++
Sbjct: 124 RSNGLRSMVNRIRE 137