HHsearch alignment for GI: 254780999 and conserved domain: PRK00302
>PRK00302 lnt apolipoprotein N-acyltransferase; Reviewed.
Probab=99.95 E-value=1.1e-25 Score=187.16 Aligned_cols=224 Identities=20% Similarity=0.289 Sum_probs=167.1
Q ss_pred CCEEEEEEECCCCCC------CHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHH
Q ss_conf 862899996388368------89999999999999999859989991664447998445414889999999999999999
Q gi|254780999|r 3 KKLKIAIAQLNPVVG------DIAGNIAKARRAREEANRQGMDLILFTELFISGYPPEDLVFKKSFIQACSSAIDTLKSD 76 (562)
Q Consensus 3 ~~mkIal~Q~n~~~g------d~~~N~~~i~~~i~~A~~~gadLvvfPEl~LtGY~~~Dl~~~~~f~~~~~~~l~~La~~ 76 (562)
T Consensus 224 ~~l~V~iVQpNi~q~~k~~~~~~~~~~~~~~~lt~~~-~~~~dlIvWPEta~p~~~-----------~~~~~~~~~i~~~ 291 (509)
T PRK00302 224 EPLKVALVQGNIPQDLKWDPAGREATLEKYLDLSEPG-LGPADLIIWPETAIPFLE-----------ENPPPFLAAIDAL 291 (509)
T ss_pred CCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCC-CCCCCEEEEECCCCCCCH-----------HHCHHHHHHHHHH
T ss_conf 8549999927988100247345999999999976403-688868996376676641-----------1158999999999
Q ss_pred HHHCCCEEEEEEEEEECC---EEEEEEEEEE-CCEEEEEEEEEEECCCCCCCC---------------CCCCCCCCCCC-
Q ss_conf 887697899999998889---8789999996-997999887776235543332---------------10037788876-
Q gi|254780999|r 77 THDGGAGIVVGFPRQDQE---GVLNSVVILD-AGNIIAVRDKINLPNYSEFHE---------------KRTFISGYSND- 136 (562)
Q Consensus 77 ~~~~~i~iivG~p~~~~~---~~yNsa~vi~-~G~il~~y~K~~LP~y~~FdE---------------~r~F~~G~~~~- 136 (562)
T Consensus 292 ~~~~~~~ll~G~~~~~~~~~~~~yNs~~~~~~~g~~~~~YdK~~LVPFGEyiP~~~~~~~~~~~~~~~~~~~~~G~~~~~ 371 (509)
T PRK00302 292 LREKGSPLITGAVGADKGGQGRYYNSIYVLGPNGEILGRYDKHHLVPFGEYVPLESLLRPLVPFFALPMGDFSRGPGVQP 371 (509)
T ss_pred HHHCCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCCCEECCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 87569849998511004887667889999879997101663111026632267598888899984566466778988776
Q ss_pred EEEECCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCC--CCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCC
Q ss_conf 14764745620111111101689999971477759931555333--5807888788999854337046421356887662
Q gi|254780999|r 137 PIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYY--HNKLKKRHEIVTGQISHVHLPIIYVNQVGGQDEL 214 (562)
Q Consensus 137 ~~~~~g~kiGv~ICeDlw~~~~~~~~la~~Gadlii~psASp~~--~~k~~~R~~~~~~~a~e~~~~vvy~N~vGg~d~l 214 (562)
T Consensus 372 ~~~~~~~~~~~~ICyE~~f~~-~~r~~~~~ga~~lvn~TND~Wfg~s~~~~QHl~~ar~RAiE~~r~~vraant------ 444 (509)
T PRK00302 372 PLLAKGFKLAPLICYEIIFPE-LVRRYKAQGADLLLNITNDAWFGDSIGPYQHFQMARMRALELGRPLIRATNT------ 444 (509)
T ss_pred CCCCCCCEEEEEEEEECCCHH-HHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCC------
T ss_conf 535788347778886320679-9997641588589991576545798558999999999998547887998186------
Q ss_pred CCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEC
Q ss_conf 1048643555898599961677763799999833
Q gi|254780999|r 215 IFDGASFCFDGQQQLAFQMKHFSEQNFMTEWHYD 248 (562)
Q Consensus 215 vf~G~S~I~d~~G~ii~~~~~f~e~~~i~d~d~d 248 (562)
T Consensus 445 ---GiSa~Id~~G~i~~~~~~~~~~~l~~~vp~~ 475 (509)
T PRK00302 445 ---GITAVIDPLGRIIAQLPLFTEGVLDGTVPPT 475 (509)
T ss_pred ---EEEEEECCCCCEEEECCCCCCEEEEEEECCC
T ss_conf ---4689999998888763899736999993178