HHsearch alignment for GI: 254780999 and conserved domain: PRK01565
>PRK01565 thiamine biosynthesis protein ThiI; Provisional.
Probab=97.87 E-value=0.00017 Score=48.56 Aligned_cols=144 Identities=19% Similarity=0.241 Sum_probs=89.7
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCHHHEEEE-ECCCCCCCCCCHHHHHHHHHHH-----CCCCCCCCHHHHHHHHHHHH
Q ss_conf 40575215872368999999841495446797-3246666522135699999972-----13542677589999988631
Q gi|254780999|r 293 HKVIIGLSGGIDSALCAAIAVDALGKENVQTI-MLPYKYTSPQSLEDAAACAKAL-----GCKYDVLPIHDLVNHFFSLM 366 (562)
Q Consensus 293 ~~~viglSGGiDSal~a~la~~alg~~~v~~~-~mp~~~~s~~s~~~a~~la~~l-----g~~~~~i~I~~~~~~~~~~~ 366 (562)
T Consensus 177 Gk~l~LlSGGIDSPVAa~~mmkR-G~-~v~~v~f~~~p~t~~~a~~kv~~l~~~L~~y~~~~kl~~v~f~~~~~~i~~~~ 254 (399)
T PRK01565 177 GKALLLLSGGIDSPVAGYLAMKR-GV-EIEAVHFHSPPYTSERAKEKVIDLARILAKYGGRIKLHVVPFTEIQEEIKKKV 254 (399)
T ss_pred CCEEEEECCCCCHHHHHHHHHHC-CC-EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCC
T ss_conf 85799861787539999999855-98-79999986899877899999999999999728885599966399999998608
Q ss_pred CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCH-----HHHHHH-HCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 323468743101101233046677988875169544364324-----477541-10236665554010177633658999
Q gi|254780999|r 367 SQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNK-----SEISVG-YGTLYGDMSGGFNPLKDLYKTQVFQL 440 (562)
Q Consensus 367 ~~~~~~~~~~~~~eN~qaR~R~~~L~~~an~~~~lvl~t~nk-----sE~~~G-y~T~~GD~~g~~~p~~~l~Kt~v~~l 440 (562)
T Consensus 255 ~~----~~~~vl----~RR~M~riA~~iA~~~~~~alvTGESLGQVASQTl~Nl~~i~~~~~~pVlRPLIg~DK~EII~~ 326 (399)
T PRK01565 255 PE----SYLMTL----MRRFMMRIADKIAEKRGALAIVTGESLGQVASQTLESMQAINAVTNLPVLRPLIGMDKEEIIEI 326 (399)
T ss_pred CC----CEEEHH----HHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 80----038599----9999999999999985997898241355676755677888875217754466557898999999
Q ss_pred HHHHHH
Q ss_conf 999631
Q gi|254780999|r 441 ASWRNS 446 (562)
Q Consensus 441 a~~~n~ 446 (562)
T Consensus 327 Ar~IGT 332 (399)
T PRK01565 327 AKEIGT 332 (399)
T ss_pred HHHCCC
T ss_conf 987096