HHsearch alignment for GI: 254780999 and conserved domain: PRK10660

>PRK10660 tilS tRNA(Ile)-lysidine synthetase; Provisional.
Probab=96.98  E-value=0.0023  Score=41.25  Aligned_cols=62  Identities=15%  Similarity=0.200  Sum_probs=32.7

Q ss_pred             CEEEEECCCCCHHHHHHHHHH---HCCCHHHEEEEECCCCCCCCCCHHHH---HHHHHHHCCCCCCCCH
Q ss_conf             405752158723689999998---41495446797324666652213569---9999972135426775
Q gi|254780999|r  293 HKVIIGLSGGIDSALCAAIAV---DALGKENVQTIMLPYKYTSPQSLEDA---AACAKALGCKYDVLPI  355 (562)
Q Consensus       293 ~~~viglSGGiDSal~a~la~---~alg~~~v~~~~mp~~~~s~~s~~~a---~~la~~lg~~~~~i~I  355 (562)
T Consensus        14 ~~ilvavSGG~DS~~LL~~L~~l~~~~~~~~l~~~HvnHgl~-~~ad~~~~fv~~~c~~~~ip~~~~~~   81 (433)
T PRK10660         14 RQILVAFSGGLDSTVLLHQLVQWRTQNPGVTLRAIHIHHGLS-PNADSWVKHCEQVCQQWQVPLVVERV   81 (433)
T ss_pred             CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC-CCHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf             989999728099999999999999866898289999718979-26699999999999975997899998