HHsearch alignment for GI: 254780999 and conserved domain: PRK11106
>PRK11106 queuosine biosynthesis protein QueC; Provisional.
Probab=98.49 E-value=2.2e-06 Score=60.96 Aligned_cols=150 Identities=21% Similarity=0.255 Sum_probs=83.5
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCC-CCCCCHHHHHHHHHHHHCCC-
Q ss_conf 5405752158723689999998414954467973246666522135699999972135-42677589999988631323-
Q gi|254780999|r 292 FHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCK-YDVLPIHDLVNHFFSLMSQF- 369 (562)
Q Consensus 292 ~~~~viglSGGiDSal~a~la~~alg~~~v~~~~mp~~~~s~~s~~~a~~la~~lg~~-~~~i~I~~~~~~~~~~~~~~- 369 (562)
T Consensus 1 MkkavVLlSGGlDStt~L~~a~~~~--~~v~alsfdYGQrh~~El~~A~~ia~~~gv~~h~vidl~~l~~~~~SaLt~~~ 78 (231)
T PRK11106 1 MKRAVVVFSGGQDSTTCLIQALQQY--DEVHCITFDYGQRHRAEIDVARELALKLGARAHKVLDVTLLNELAVSSLTRDS 78 (231)
T ss_pred CCEEEEEECCCHHHHHHHHHHHHCC--CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCCCCCC
T ss_conf 9808999078789999999999819--94999987778671999999999999859840067532777775235667778
Q ss_pred CCCCCCCHHHHCCCC---HHHHHHHH----HHHHHCC--CEECCCC---------CHHHH------HHHHCCCCCCCCCC
Q ss_conf 468743101101233---04667798----8875169--5443643---------24477------54110236665554
Q gi|254780999|r 370 LQEEPSGIVAENIQS---RIRGNILM----ALSNHSK--AMLLTTS---------NKSEI------SVGYGTLYGDMSGG 425 (562)
Q Consensus 370 ~~~~~~~~~~eN~qa---R~R~~~L~----~~an~~~--~lvl~t~---------nksE~------~~Gy~T~~GD~~g~ 425 (562)
T Consensus 79 i~vp~~~~~~~~~p~T~VP~RN~ifLsiAaa~Ae~~ga~~I~~G~~~~D~sgYPDCr~eFi~a~~~al~~g~~--~~i~i 156 (231)
T PRK11106 79 IPVPDYEPEADGLPNTFVPGRNILFLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVVLGMA--KDIRF 156 (231)
T ss_pred CCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCC--CCEEE
T ss_conf 7777765444578764671672999999999999859995998046556688998989999999999985178--98199
Q ss_pred CCCCCCCCHHHHHHHHHHHH
Q ss_conf 01017763365899999963
Q gi|254780999|r 426 FNPLKDLYKTQVFQLASWRN 445 (562)
Q Consensus 426 ~~p~~~l~Kt~v~~la~~~n 445 (562)
T Consensus 157 ~aPl~~l~K~eiv~l~~~~~ 176 (231)
T PRK11106 157 ETPLMWLDKAETWALADYYG 176 (231)
T ss_pred EECCCCCCHHHHHHHHHHCC
T ss_conf 83777788889999998616