HHsearch alignment for GI: 254780999 and conserved domain: TIGR00032
>TIGR00032 argG argininosuccinate synthase; InterPro: IPR001518 Argininosuccinate synthase (6.3.4.5 from EC) (AS) is a urea cycle enzyme that catalyzes the penultimate step in arginine biosynthesis: the ATP-dependent ligation of citrulline to aspartate to form argininosuccinate, AMP and pyrophosphate , . In humans, a defect in the AS gene causes citrullinemia, a genetic disease characterised by severe vomiting spells and mental retardation. AS is a homotetrameric enzyme of chains of about 400 amino-acid residues. An arginine seems to be important for the enzyme's catalytic mechanism. The sequences of AS from various prokaryotes, archaebacteria and eukaryotes show significant similarity.; GO: 0004055 argininosuccinate synthase activity, 0005524 ATP binding, 0006526 arginine biosynthetic process.
Probab=95.94 E-value=0.07 Score=31.51 Aligned_cols=111 Identities=19% Similarity=0.298 Sum_probs=76.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCC-CCCHHHHHHHHHHHCC-CCCCCCHHH-HHHH-HHHHHC-C
Q ss_conf 057521587236899999984149544679732466665-2213569999997213-542677589-9999-886313-2
Q gi|254780999|r 294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTS-PQSLEDAAACAKALGC-KYDVLPIHD-LVNH-FFSLMS-Q 368 (562)
Q Consensus 294 ~~viglSGGiDSal~a~la~~alg~~~v~~~~mp~~~~s-~~s~~~a~~la~~lg~-~~~~i~I~~-~~~~-~~~~~~-~ 368 (562)
T Consensus 1 KVvLAySGGLDTSv~l~wL~~kyG~~~Via~~~d-vGQPDE~d~~~~~~kA~~~GA~~~~~iDak~eFv~dy~f~aiqan 79 (420)
T TIGR00032 1 KVVLAYSGGLDTSVCLKWLEEKYGYEEVIAVTAD-VGQPDEEDIDAIEEKALKYGAEKHYTIDAKEEFVKDYLFAAIQAN 79 (420)
T ss_pred CEEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEE-CCCCCHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCC
T ss_conf 9688860702599999998865289860799975-679998888889999887367102577236889999988876506
Q ss_pred CCCCCCCCHHHHCCCCHHHHH---HHHHHHHHCCCEECCC
Q ss_conf 346874310110123304667---7988875169544364
Q gi|254780999|r 369 FLQEEPSGIVAENIQSRIRGN---ILMALSNHSKAMLLTT 405 (562)
Q Consensus 369 ~~~~~~~~~~~eN~qaR~R~~---~L~~~an~~~~lvl~t 405 (562)
T Consensus 80 A~Ye~~GG~~Y~L~TaLaRPlIA~~lVe~Ak~~Ga~AvaH 119 (420)
T TIGR00032 80 AVYEGTGGLVYPLSTALARPLIAKKLVEVAKKEGAEAVAH 119 (420)
T ss_pred CEECCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEC
T ss_conf 6031787410347661145799999999984669549870