HHsearch alignment for GI: 254780999 and conserved domain: TIGR00364
>TIGR00364 TIGR00364 exsB protein; InterPro: IPR004479 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome. In Sinorhizobium meliloti, a species in which the exo genes make succinoglycan, a symbiotically important exopolysaccharide, exsB is located nearby and affects succinoglycan levels, probably through polar effects on exsA expression or the same polycistronic mRNA , . In Arthrobacter viscosus, the homologous gene is designated alu1 and is associated with an aluminum tolerance phenotype. When expressed in Escherichia coli, it conferred aliminium tolerance . The entry also contains the gene queC, which is responsible for the conversion of GTP to 7-cyano-7-deazaguanine (preQ0). The biosynthesis of hypermodified tRNA nucleoside queuosine only occurs in eubacteria. It occupies the wobble position for all known tRNAs that are specific for Asp, Asn, His or Tyr ..
Probab=98.98 E-value=3.5e-09 Score=79.23 Aligned_cols=150 Identities=25% Similarity=0.259 Sum_probs=97.5
Q ss_pred EEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCC-CCCCHHHHHHHHHHHCCCCC-CCCHHHHHHHHH-HHHCCCCC
Q ss_conf 5752158723689999998414954467973246666-52213569999997213542-677589999988-63132346
Q gi|254780999|r 295 VIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT-SPQSLEDAAACAKALGCKYD-VLPIHDLVNHFF-SLMSQFLQ 371 (562)
Q Consensus 295 ~viglSGGiDSal~a~la~~alg~~~v~~~~mp~~~~-s~~s~~~a~~la~~lg~~~~-~i~I~~~~~~~~-~~~~~~~~ 371 (562)
T Consensus 1 Av~~lSGG~DStT~~~~a~~~~GkyeV~a~TF~YGQR~H~~Ele~A~~ia~~Lgi~~~~~~Dl~~l~~l~~YsaLt~~~~ 80 (227)
T TIGR00364 1 AVVVLSGGQDSTTVLLIALDEGGKYEVHAITFDYGQRAHSRELESARKIAEALGIRHHFVIDLSLLKQLGKYSALTDEQE 80 (227)
T ss_pred CEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCCCCCCC
T ss_conf 96874373468999999996179507998546501378999999999999980897078617799985540452357875
Q ss_pred C-----CCC--CHHHHCCCCH---HH----HHHHHHHHHHCCC--EECC---------CCCHHHHH------HHHC-CCC
Q ss_conf 8-----743--1011012330---46----6779888751695--4436---------43244775------4110-236
Q gi|254780999|r 372 E-----EPS--GIVAENIQSR---IR----GNILMALSNHSKA--MLLT---------TSNKSEIS------VGYG-TLY 419 (562)
Q Consensus 372 ~-----~~~--~~~~eN~qaR---~R----~~~L~~~an~~~~--lvl~---------t~nksE~~------~Gy~-T~~ 419 (562)
T Consensus 81 ~~~~~~~e~d~~~~~E~~p~tfVPgRN~~fl~~a~~yA~~~gA~~v~~G~~~~DfSgYPDCr~EFvka~n~~l~Lgn~~~ 160 (227)
T TIGR00364 81 IPEQKSNEEDKEKALETLPNTFVPGRNLIFLSLAASYAEALGAEAVITGVCETDFSGYPDCRDEFVKALNHALNLGNMLT 160 (227)
T ss_pred CCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 67666653202356531133337804799999999988861842522001000365798886889999999999741268
Q ss_pred CCCCCC-----CCCCCCCCHHHHHHHHHHHHH
Q ss_conf 665554-----010177633658999999631
Q gi|254780999|r 420 GDMSGG-----FNPLKDLYKTQVFQLASWRNS 446 (562)
Q Consensus 420 GD~~g~-----~~p~~~l~Kt~v~~la~~~n~ 446 (562)
T Consensus 161 ~--v~i~Piql~aPL~~ltKaeiv~la~elGk 190 (227)
T TIGR00364 161 P--VEIRPIQLEAPLMDLTKAEIVKLADELGK 190 (227)
T ss_pred C--CEEEEEEEECCEEECCHHHHHHHHHHHCC
T ss_conf 8--11202466667012698999999887351