HHsearch alignment for GI: 254780999 and conserved domain: TIGR00546

>TIGR00546 lnt apolipoprotein N-acyltransferase; InterPro: IPR004563 Apolipoprotein N-acyltransferase 2.3.1 from EC transfers the acyl group to lipoproteins and is involved in lipoprotein biosynthesis. It is an integral membrane protein.; GO: 0016410 N-acyltransferase activity, 0042158 lipoprotein biosynthetic process, 0016021 integral to membrane.
Probab=99.90  E-value=1.3e-22  Score=167.21  Aligned_cols=214  Identities=21%  Similarity=0.318  Sum_probs=162.0

Q ss_pred             CCCEEEEEEECCCCCC------CHHHHHHHHHHHHHHHHHC-------CCCEEEECCCCCCCCCHHHHHCCHHHHHH---
Q ss_conf             8862899996388368------8999999999999999985-------99899916644479984454148899999---
Q gi|254780999|r    2 LKKLKIAIAQLNPVVG------DIAGNIAKARRAREEANRQ-------GMDLILFTELFISGYPPEDLVFKKSFIQA---   65 (562)
Q Consensus         2 ~~~mkIal~Q~n~~~g------d~~~N~~~i~~~i~~A~~~-------gadLvvfPEl~LtGY~~~Dl~~~~~f~~~---   65 (562)
T Consensus       177 ~~~~~ValvQ~~~p~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlvvwPEta~~~~l-~---~~~~~~~~~Q~  252 (441)
T TIGR00546       177 EPTLKVALVQPNIPQDLKFDKEGLEAILELLTSLTKQAVEKVHAGLYEKPDLVVWPETALPFDL-E---NSPDKLHESQS  252 (441)
T ss_pred             CCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHCCCC-C---CCCHHCCCCCC
T ss_conf             7326899986888800134110179999999999885225667677787327884615332366-6---43211033673


Q ss_pred             HHHHHHHHHHHHHHCCCEEEEEEEEEECC-------EEEEEEEEEEC-C----EEEEEEEEEEE-------C--CCCCC-
Q ss_conf             99999999999887697899999998889-------87899999969-9----79998877762-------3--55433-
Q gi|254780999|r   66 CSSAIDTLKSDTHDGGAGIVVGFPRQDQE-------GVLNSVVILDA-G----NIIAVRDKINL-------P--NYSEF-  123 (562)
Q Consensus        66 ~~~~l~~La~~~~~~~i~iivG~p~~~~~-------~~yNsa~vi~~-G----~il~~y~K~~L-------P--~y~~F-  123 (562)
T Consensus       253 ~f~~~~~~~~~~~~~~~p~~~G~~~~~~~~~~~~~~~~yNs~~~~~~~~~a~~~~~~~Y~K~~LVPFGEy~P~~~~~~f~  332 (441)
T TIGR00546       253 AFDLLKALKALVLSKGIPILIGAPDADPKGQKGEEYEYYNSVYLLDPGGKAVLEVVQRYDKVKLVPFGEYIPFGLKFVFK  332 (441)
T ss_pred             HHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHCCCEEECCCCCCCCCCCHHHHH
T ss_conf             78999999999874098489963010378888874311125899848862003505353874543562326776333444


Q ss_pred             ---------CCCCCCCCCCCCCEEEECC--EEEEECCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCC--CHHHHHHH
Q ss_conf             ---------3210037788876147647--4562011111110168999997147775993155533358--07888788
Q gi|254780999|r  124 ---------HEKRTFISGYSNDPIVFRD--IRLGILICEDIWKNSNICKHLKKQGAEFLFSLNASPYYHN--KLKKRHEI  190 (562)
Q Consensus       124 ---------dE~r~F~~G~~~~~~~~~g--~kiGv~ICeDlw~~~~~~~~la~~Gadlii~psASp~~~~--k~~~R~~~  190 (562)
T Consensus       333 ~~~~~~~~~~~~~~~~~G~~~~v~~~~~~~~~~~~~ICYE~~Fp~-~~r~~~~~Ga~~L~~~tNDaWf~~~~~~~QH~~~  411 (441)
T TIGR00546       333 WLSKLFFLASEQESFARGNGPQVLKLPGGAVKLAPLICYESIFPE-LVRALARQGAELLVNLTNDAWFGDSSGPWQHFAL  411 (441)
T ss_pred             HHHHHHHHCCCCCCHHCCCCCCCCCCCCCCEEEEEEEEHHHHHHH-HHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHH
T ss_conf             776543200222331127887653447760277753115541168-8987425883289974005643666167889999


Q ss_pred             HHHHHHHCCCEEEECCCCCCCCCCCCCCCCEEECCCCEE
Q ss_conf             999854337046421356887662104864355589859
Q gi|254780999|r  191 VTGQISHVHLPIIYVNQVGGQDELIFDGASFCFDGQQQL  229 (562)
Q Consensus       191 ~~~~a~e~~~~vvy~N~vGg~d~lvf~G~S~I~d~~G~i  229 (562)
T Consensus       412 ~~~RA~E~~~~~~Ra~Nt---------G~sa~i~p~G~~  441 (441)
T TIGR00546       412 ARFRAIENGRPLVRAANT---------GISAVIDPRGRI  441 (441)
T ss_pred             HHHHHHHCCCEEEEEECC---------CCEEEEECCCCC
T ss_conf             888876448548999606---------625898067889