HHsearch alignment for GI: 254780999 and conserved domain: TIGR00552
>TIGR00552 nadE NAD+ synthetase; InterPro: IPR003694 NAD+ synthase (6.3.5.1 from EC) catalyzes the last step in the biosynthesis of nicotinamide adenine dinucleotide and is induced by stress factors such as heat shock and glucose limitation. The three-dimensional structure of NH3-dependent NAD+ synthetase from Bacillus subtilis, in its free form and in complex with ATP shows that the enzyme consists of a tight homodimer with alpha/beta subunit topology .; GO: 0003952 NAD+ synthase (glutamine-hydrolyzing) activity, 0005524 ATP binding, 0009435 NAD biosynthetic process.
Probab=100.00 E-value=0 Score=354.97 Aligned_cols=262 Identities=35% Similarity=0.485 Sum_probs=226.4
Q ss_pred HHHHHHCCHHHHHHHHHHHC-CCCEEEEECCCCCHH--------HHHHHHHHHCCCHHHEEEEECCCCCC-CCCCHHHHH
Q ss_conf 88864220203588876422-454057521587236--------89999998414954467973246666-522135699
Q gi|254780999|r 271 EEEADYNACVLSLRDYVQKN-NFHKVIIGLSGGIDS--------ALCAAIAVDALGKENVQTIMLPYKYT-SPQSLEDAA 340 (562)
Q Consensus 271 ~~e~~~~Alvlgl~d~~~~~-g~~~~viglSGGiDS--------al~a~la~~alg~~~v~~~~mp~~~~-s~~s~~~a~ 340 (562)
T Consensus 5 ~~~~~~~~~~-~~~~~~~~~~~~~g~v~GlsGG~ds~l~g~l~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~a~ 83 (286)
T TIGR00552 5 VVEELEDAVD-FLRGYVKKSPGAKGVVLGLSGGVDSTLAGKLCQAVVAALCVEALGKEQNHALLLPHSNTTPEDDVQDAL 83 (286)
T ss_pred HHHHHHHHHH-HHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCHHHHHHHH
T ss_conf 7899999898-888887632576504673047620356778999999999985046114203321466788412179999
Q ss_pred HHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCC
Q ss_conf 99997213542677589999988631323468743101101233046677988875169544364324477541102366
Q gi|254780999|r 341 ACAKALGCKYDVLPIHDLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYG 420 (562)
Q Consensus 341 ~la~~lg~~~~~i~I~~~~~~~~~~~~~~~~~~~~~~~~eN~qaR~R~~~L~~~an~~~~lvl~t~nksE~~~Gy~T~~G 420 (562)
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gn~~~r~r~~~~y~~a~~~~~lv~gt~n~~e~~~Gy~t~~G 162 (286)
T TIGR00552 84 ALAEPLGINYKTIDIAPIAASFQAQTET-GDPLADFLAEGNLKARLRMALLYAHANKHNLLVLGTGNKSELLLGYFTKYG 162 (286)
T ss_pred HHHHHCCCCCEECCCHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCC
T ss_conf 9887405442111304677887764203-443331023322247889999988731016356404613445432001014
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC---CCCCCCCC-CHHHHHHHHHHH
Q ss_conf 65554010177633658999999631033222344446688788288988453899---97700068-878899999999
Q gi|254780999|r 421 DMSGGFNPLKDLYKTQVFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPH---QTDQESLP-PYPILDDIIKRI 496 (562)
Q Consensus 421 D~~g~~~p~~~l~Kt~v~~la~~~n~~~~~~~~~~~~~~ip~~i~~~~psaeL~~~---Q~ded~l~-~Y~~lD~il~~~ 496 (562)
T Consensus 163 dg~~d~~p~~~l~k~~~~~l~~~l~~~---------~~~~P~~~~~k~P~a~l~~g~p~q~de~~~g~~y~~ld~~l~~~ 233 (286)
T TIGR00552 163 DGGCDILPLGGLFKTEVYELAKRLGVE---------QTIIPEEIIEKPPTADLWPGKPSQTDETELGIPYDELDDYLKGL 233 (286)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHCCC---------CCCCCHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHH
T ss_conf 420003455322378899999981753---------10146667337887554678887765445057777777887766
Q ss_pred HHCCCCH---HHH-HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
Q ss_conf 8279997---798-71899999999999998745668738970247264537
Q gi|254780999|r 497 VENEESF---INN-DQEYNDETVRYVEHLLYGSEYKRRQAPVGTKITAKSFG 544 (562)
Q Consensus 497 i~~~~~~---~~~-~~~~~~~~v~~~~~~~~~~~~KR~~~pp~~~is~~sfg 544 (562)
T Consensus 234 ~~~~~~~p~d~~~~~~~~~-~~~~~~~~~~~~~~hk~~~~~P~~~~~~~~~~ 284 (286)
T TIGR00552 234 EELSQPKPIDQEVLATLLP-ELVKRIESLVQKSEHKREQALPPVPTIFDLFW 284 (286)
T ss_pred HHHCCCCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHC
T ss_conf 6412677514687862016-89999999887555555423786113545305