HHsearch alignment for GI: 254780999 and conserved domain: TIGR01536
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing); InterPro: IPR006426 These sequences represent glutamine-hydrolysing asparagine synthase. The group have a poorly conserved C-terminal extension while bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis .; GO: 0004066 asparagine synthase (glutamine-hydrolyzing) activity, 0006529 asparagine biosynthetic process.
Probab=98.10 E-value=1.6e-05 Score=55.35 Aligned_cols=122 Identities=23% Similarity=0.286 Sum_probs=76.5
Q ss_pred CEEEEECCCCCHHHHHHHHHHHCCCH------HHEEEEECCCCCCCCCCHH-----------HHHHHHHHHCCCCCCCCH
Q ss_conf 40575215872368999999841495------4467973246666522135-----------699999972135426775
Q gi|254780999|r 293 HKVIIGLSGGIDSALCAAIAVDALGK------ENVQTIMLPYKYTSPQSLE-----------DAAACAKALGCKYDVLPI 355 (562)
Q Consensus 293 ~~~viglSGGiDSal~a~la~~alg~------~~v~~~~mp~~~~s~~s~~-----------~a~~la~~lg~~~~~i~I 355 (562)
T Consensus 312 vpvG~~LSGGlDSS~vaa~a~~~~~~~~~~W~~~~~tFsigf~~~~-~~~~Es~l~P~~D~P~A~~vA~~~G~~h~~~~~ 390 (646)
T TIGR01536 312 VPVGVLLSGGLDSSLVAAIARREAPSEGVDWKGPVKTFSIGFEGDS-KDFDESKLRPDDDQPYARKVADELGTEHHEVLI 390 (646)
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC-CCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEE
T ss_conf 6068887171679999999999767643311774347886517787-653002578998618999999984983248984
Q ss_pred H--HHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHC-CCEECCCCC-HHHHHHHHCCCCC
Q ss_conf 8--999998863132346874310110123304667798887516-954436432-4477541102366
Q gi|254780999|r 356 H--DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHS-KAMLLTTSN-KSEISVGYGTLYG 420 (562)
Q Consensus 356 ~--~~~~~~~~~~~~~~~~~~~~~~~eN~qaR~R~~~L~~~an~~-~~lvl~t~n-ksE~~~Gy~T~~G 420 (562)
T Consensus 391 s~~e~~~~l~~v~~~-~e--~y~p~--~~~~~~P~Yl~s~~ar~~Tg~kV~LSGeGaDElFgGY~~f~~ 454 (646)
T TIGR01536 391 SEEEVLKALPEVIYH-LE--TYDPT--AIRASIPLYLLSKLAREDTGVKVVLSGEGADELFGGYEYFRE 454 (646)
T ss_pred CHHHHHHHHHHHHHH-HC--CCCCC--CCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCHHHHCC
T ss_conf 589999998887654-24--88543--031123589999999962883899748663555304244214