HHsearch alignment for GI: 254780999 and conserved domain: TIGR03104

>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase. Members of this protein family are closely related to several isoforms of asparagine synthetase (glutamine amidotransferase) and typically have been given this name in genome annotation to date. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and a member of the GNAT family of acetyltransferases.
Probab=98.35  E-value=4.9e-06  Score=58.70  Aligned_cols=132  Identities=15%  Similarity=0.163  Sum_probs=75.4

Q ss_pred             HCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCC---CCCCHHHHHHHHHHHCCCCCC
Q ss_conf             22020358887642245405752158723689999998414954467973246666---522135699999972135426
Q gi|254780999|r  276 YNACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYT---SPQSLEDAAACAKALGCKYDV  352 (562)
Q Consensus       276 ~~Alvlgl~d~~~~~g~~~~viglSGGiDSal~a~la~~alg~~~v~~~~mp~~~~---s~~s~~~a~~la~~lg~~~~~  352 (562)
T Consensus       246 ~~~l~~sV~~rl~s--Dvpvg~~LSGGlDSS~i~a~~~~~~-~~~i~tfs~~f~~~~~~~~dE~~~a~~va~~~~~~h~~  322 (589)
T TIGR03104       246 LEALRLAVKRRLVA--DVPVGVLLSGGLDSSLIVGLLAEAG-VDGLRTFSIGFEDVGGEKGDEFEYSDIIAERFHTRHHK  322 (589)
T ss_pred             HHHHHHHHHHHHHC--CCCCCEECCCCCCHHHHHHHHHHHC-CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEE
T ss_conf             99999999999744--6763000178754389999999956-99985278872468877666799999999973878579


Q ss_pred             CCHH--HHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCC
Q ss_conf             7758--9999988631323468743101101233046677988875169544364324477541102
Q gi|254780999|r  353 LPIH--DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGT  417 (562)
Q Consensus       353 i~I~--~~~~~~~~~~~~~~~~~~~~~~~eN~qaR~R~~~L~~~an~~~~lvl~t~nksE~~~Gy~T  417 (562)
T Consensus       323 ~~~~~~~~~~~l~~~~~~-~deP~~~~------~~~~~~~l~~~~~~~~kV~LsG~GaDElfgGY~~  382 (589)
T TIGR03104       323 IRIPNHRVLPALPEAVAA-MSEPMVSH------DCVAFYLLSEEVSKHVKVVQSGQGADEVFGGYHW  382 (589)
T ss_pred             EEECCHHHHHHHHHHHHC-CCCCCCCC------HHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCC
T ss_conf             995717899988998852-68987683------0688999998732883699952033323479754