HHsearch alignment for GI: 254780999 and conserved domain: cd01712

>cd01712 ThiI ThiI is required for thiazole synthesis in the thiamine biosynthesis pathway. It belongs to the Adenosine Nucleotide Hydrolysis suoerfamily and predicted to bind to Adenosine nucleotide.
Probab=98.40  E-value=3.9e-06  Score=59.29  Aligned_cols=141  Identities=21%  Similarity=0.173  Sum_probs=79.2

Q ss_pred             EEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCC-CCCCCCCHHHHHHHHHHHC-----CCCCCCCHHHHHHHHHHHHC
Q ss_conf             05752158723689999998414954467973246-6665221356999999721-----35426775899999886313
Q gi|254780999|r  294 KVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPY-KYTSPQSLEDAAACAKALG-----CKYDVLPIHDLVNHFFSLMS  367 (562)
Q Consensus       294 ~~viglSGGiDSal~a~la~~alg~~~v~~~~mp~-~~~s~~s~~~a~~la~~lg-----~~~~~i~I~~~~~~~~~~~~  367 (562)
T Consensus         1 kvl~L~SGGiDS~VAa~ll~kr-G~-~V~~l~f~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~   76 (177)
T cd01712           1 KALALLSGGIDSPVAAWLLMKR-GI-EVDALHFNSGPFTSEKAREKVEDLARKLARYSPGHKLVVIIFTFFV--QKEIYG   76 (177)
T ss_pred             CEEEEECCCCHHHHHHHHHHHC-CC-EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHH--HHHHHH
T ss_conf             9899957781699999999987-99-8999999899988889999999999999994899628999453899--999997


Q ss_pred             CCCCCCCCCHHHHCCCCHHH---HHHHHHHHHHCCCEECCCCCH-----HHHHHH-HCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             23468743101101233046---677988875169544364324-----477541-102366655540101776336589
Q gi|254780999|r  368 QFLQEEPSGIVAENIQSRIR---GNILMALSNHSKAMLLTTSNK-----SEISVG-YGTLYGDMSGGFNPLKDLYKTQVF  438 (562)
Q Consensus       368 ~~~~~~~~~~~~eN~qaR~R---~~~L~~~an~~~~lvl~t~nk-----sE~~~G-y~T~~GD~~g~~~p~~~l~Kt~v~  438 (562)
T Consensus        77 ~---g~~~-----npcv~ckr~m~r~a~~~A~~~ga~~IvTGe~lGQvasqt~~nl~~i~~~~~~~ilRPL~~~dK~EI~  148 (177)
T cd01712          77 Y---GKEK-----YRCILCKRMMYRIAEKLAEELGADAIVTGESLGQVASQTLENLLVISSGTDLPILRPLIGFDKEEII  148 (177)
T ss_pred             H---CCCC-----CCCEEHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
T ss_conf             0---8888-----9863629999999999999869989986652220447689999999874256421488899989999


Q ss_pred             HHHHHHHH
Q ss_conf             99999631
Q gi|254780999|r  439 QLASWRNS  446 (562)
Q Consensus       439 ~la~~~n~  446 (562)
T Consensus       149 ~~A~~igt  156 (177)
T cd01712         149 GIARRIGT  156 (177)
T ss_pred             HHHHHHCC
T ss_conf             99998096