HHsearch alignment for GI: 254780999 and conserved domain: pfam02540
>pfam02540 NAD_synthase NAD synthase. NAD synthase (EC:6.3.5.1) is involved in the de novo synthesis of NAD and is induced by stress factors such as heat shock and glucose limitation.
Probab=100.00 E-value=0 Score=526.06 Aligned_cols=238 Identities=43% Similarity=0.610 Sum_probs=228.3
Q ss_pred CCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCHH
Q ss_conf 20203588876422454057521587236899999984149544679732466665221356999999721354267758
Q gi|254780999|r 277 NACVLSLRDYVQKNNFHKVIIGLSGGIDSALCAAIAVDALGKENVQTIMLPYKYTSPQSLEDAAACAKALGCKYDVLPIH 356 (562)
Q Consensus 277 ~Alvlgl~d~~~~~g~~~~viglSGGiDSal~a~la~~alg~~~v~~~~mp~~~~s~~s~~~a~~la~~lg~~~~~i~I~ 356 (562)
T Consensus 3 ~~i~~~l~dyv~k~g~~gvViGlSGGIDSav~a~La~~AlG~~~v~~v~mP~~~ss~~s~~~A~~la~~lgi~~~~i~I~ 82 (243)
T pfam02540 3 ERLVDFLRDYVQKSGAKGVVLGLSGGIDSAVVAYLAVKALGKENVLALIMPSINSSEEDVQDALALAENLGINYKTIDIK 82 (243)
T ss_pred HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECH
T ss_conf 79999999999981999199978887999999999999559742899964777898889999999999968926999888
Q ss_pred HHHHHHHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 99999886313234687431011012330466779888751695443643244775411023666555401017763365
Q gi|254780999|r 357 DLVNHFFSLMSQFLQEEPSGIVAENIQSRIRGNILMALSNHSKAMLLTTSNKSEISVGYGTLYGDMSGGFNPLKDLYKTQ 436 (562)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~eN~qaR~R~~~L~~~an~~~~lvl~t~nksE~~~Gy~T~~GD~~g~~~p~~~l~Kt~ 436 (562)
T Consensus 83 ~~~~~~~~~~~~----~~~~~a~~Ni~aR~Rm~~ly~~A~~~~~lVlgT~NksE~~~Gy~TkyGD~~~di~Pi~dL~Kte 158 (243)
T pfam02540 83 PIVRAFSQLFQP----AKDDLAKGNLKARIRMIILYAHANKFNRLVLGTGNKSELALGYFTKYGDGACDIAPIGDLYKTQ 158 (243)
T ss_pred HHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEECCCCCCCHHHHCCCCHHH
T ss_conf 999999988532----0137787455788889999986233791898168704200543231277765515416881899
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHCCCCHHHHHH--CCCHH
Q ss_conf 899999963103322234444668878828898845389997700068-878899999999827999779871--89999
Q gi|254780999|r 437 VFQLASWRNSHGITSGLGPLTEVIPPSILEKSPSAELRPHQTDQESLP-PYPILDDIIKRIVENEESFINNDQ--EYNDE 513 (562)
Q Consensus 437 v~~la~~~n~~~~~~~~~~~~~~ip~~i~~~~psaeL~~~Q~ded~l~-~Y~~lD~il~~~i~~~~~~~~~~~--~~~~~ 513 (562)
T Consensus 159 V~~la~~l~--------------vP~~ii~k~Psa~L~~~qtDE~~lg~~Y~~lD~~l~~~~~~~~~~~~i~~~~g~~~~ 224 (243)
T pfam02540 159 VYELAKRLN--------------VPERIIKKPPSADLWPGQTDEDELGITYDELDQILKGLIEKKLSPEEIIGDLGLPAE 224 (243)
T ss_pred HHHHHHHHC--------------CCHHHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHH
T ss_conf 999999949--------------888898379998888899861003899999999999998759999999987298999
Q ss_pred HHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999987456687389
Q gi|254780999|r 514 TVRYVEHLLYGSEYKRRQAP 533 (562)
Q Consensus 514 ~v~~~~~~~~~~~~KR~~~p 533 (562)
T Consensus 225 ~v~~i~~~~~~~e~KR~-~P 243 (243)
T pfam02540 225 VVERVENLIQKSEHKRR-LP 243 (243)
T ss_pred HHHHHHHHHHHHHHCCC-CC
T ss_conf 99999999997405529-97