PSIBLAST alignment of GI: 254780999 and protein with PDB id: 1ems

gi|9955180|pdb|1EMS|A Chain A, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440
>gi|9955181|pdb|1EMS|B Chain B, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440
 Score = 93.2 bits (230), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 77/257 (29%), Gaps = 25/257 (9%)

Query: 7   IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPE---DLVFKKSF 62
           IA+ Q+     D+  N   A+   E A  +  +++   E F   G       DL      
Sbjct: 17  IAVCQM-TSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATD- 74

Query: 63  IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQE----GVLNSVVILD-AGNIIAVRDKINL 117
                  ++  +         + +G              N+ +I+D  G   A  +K++L
Sbjct: 75  ----CEYMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHL 130

Query: 118 PNYSE------FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171
            +            + +        P+     RLG+ IC D+     +    +K+GA+ L
Sbjct: 131 FDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFP-ELSLWNRKRGAQLL 189

Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCFDGQQQLA 230
              +A             ++  +       ++   Q G    +    G S   D    + 
Sbjct: 190 SFPSAFTLNTGLAHW-ETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVV 248

Query: 231 FQMKHFSEQNFMTEWHY 247
            Q           E   
Sbjct: 249 AQCSERV-DMCFAEIDL 264