PSIBLAST alignment of GI: 254780999 and protein with PDB id: 1ems
gi|9955180|pdb|1EMS|A Chain A, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440
>gi|9955181|pdb|1EMS|B Chain B, Crystal Structure Of The C. Elegans Nitfhit Protein Length = 440
Score = 93.2 bits (230), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/257 (15%), Positives = 77/257 (29%), Gaps = 25/257 (9%)
Query: 7 IAIAQLNPVVGDIAGNIAKARRAREEANRQGMDLILFTELF-ISGYPPE---DLVFKKSF 62
IA+ Q+ D+ N A+ E A + +++ E F G DL
Sbjct: 17 IAVCQM-TSDNDLEKNFQAAKNMIERAGEKKCEMVFLPECFDFIGLNKNEQIDLAMATD- 74
Query: 63 IQACSSAIDTLKSDTHDGGAGIVVGFPRQDQE----GVLNSVVILD-AGNIIAVRDKINL 117
++ + + +G N+ +I+D G A +K++L
Sbjct: 75 ----CEYMEKYRELARKHNIWLSLGGLHHKDPSDAAHPWNTHLIIDSDGVTRAEYNKLHL 130
Query: 118 PNYSE------FHEKRTFISGYSNDPIVFRDIRLGILICEDIWKNSNICKHLKKQGAEFL 171
+ + + P+ RLG+ IC D+ + +K+GA+ L
Sbjct: 131 FDLEIPGKVRLMESEFSKAGTEMIPPVDTPIGRLGLSICYDVRFP-ELSLWNRKRGAQLL 189
Query: 172 FSLNASPYYHNKLKKRHEIVTGQISHVHLPIIYVNQVGGQ-DELIFDGASFCFDGQQQLA 230
+A ++ + ++ Q G + G S D +
Sbjct: 190 SFPSAFTLNTGLAHW-ETLLRARAIENQCYVVAAAQTGAHNPKRQSYGHSMVVDPWGAVV 248
Query: 231 FQMKHFSEQNFMTEWHY 247
Q E
Sbjct: 249 AQCSERV-DMCFAEIDL 264