HHsearch alignment for GI: 254781000 and conserved domain: COG0220

Probab=97.57  E-value=0.00035  Score=46.53  Aligned_cols=110  Identities=18%  Similarity=0.240  Sum_probs=85.6

Q ss_pred             EEEEECCCCCHHHHHHHHCC--CEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHCC
Q ss_conf             38860246423588885068--5699844758899999997886089964999768999989886233222232101014
Q gi|254781000|r  212 DLLELYCGNGNFSLVLARHF--DRVLAVEIAKPSVEAARYNIAANHVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHS  289 (371)
Q Consensus       212 ~vlDLycG~G~fsl~La~~~--~~V~gvE~~~~ai~~A~~Na~~N~i~n~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~  289 (371)
T Consensus        51 i~lEIGfG~G~~l~~~A~~nP~~nfiGiEi~~~~v~~~l~k~~~~~l~Nlri~~~DA~~~l~~~~~~~s-----------  119 (227)
T COG0220          51 IVLEIGFGMGEFLVEMAKKNPEKNFLGIEIRVPGVAKALKKIKELGLKNLRLLCGDAVEVLDYLIPDGS-----------  119 (227)
T ss_pred             EEEEECCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCCCCC-----------
T ss_conf             699968889878999998789877899997348999999999982998469980779999973589885-----------


Q ss_pred             CCCCEEEE---CCC-------CCCHHHHHHHHHH---CCCCEEEEECCHHHHHHH-HHH
Q ss_conf             78779998---697-------0263489999985---399489992998999886-998
Q gi|254781000|r  290 YRFKTIFV---DPP-------RSGLDDATVGMVQ---AYPHILYISCNPDSLCRD-LSI  334 (371)
Q Consensus       290 ~~~d~vil---DPP-------R~G~~~~~~~~~~---~~~~ivYVSCnp~TlarD-~~~  334 (371)
T Consensus       120 --l~~I~i~FPDPWpKkRH~KRRl~~~~fl~~~a~~Lk~gG~l~~aTD~~~y~e~~~~~  176 (227)
T COG0220         120 --LDKIYINFPDPWPKKRHHKRRLTQPEFLKLYARKLKPGGVLHFATDNEEYFEWMMLE  176 (227)
T ss_pred             --EEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH
T ss_conf             --657999799999876643321478899999999726897899972679999999999