HHsearch alignment for GI: 254781000 and conserved domain: COG0742

Probab=99.31  E-value=7.6e-11  Score=89.96  Aligned_cols=119  Identities=20%  Similarity=0.383  Sum_probs=90.3

Q ss_pred             HHHHHHHHHEEE-CCCCCCCEEEEECCCCCHHHH-HHHHCCCEEEEECCCHHHHHHHHHHHHHCCC-CCEEEEECCHHHH
Q ss_conf             787755442011-147788338860246423588-8850685699844758899999997886089-9649997689999
Q gi|254781000|r  193 GINVHMLEWVLA-ATKGIQGDLLELYCGNGNFSL-VLARHFDRVLAVEIAKPSVEAARYNIAANHV-NNVKIVRMSSKEF  269 (371)
Q Consensus       193 ~~~~~l~~~v~~-~~~~~~~~vlDLycG~G~fsl-~La~~~~~V~gvE~~~~ai~~A~~Na~~N~i-~n~~f~~~~a~~~  269 (371)
T Consensus        28 rVREalFNil~~~~i--~g~~~LDlFAGSGaLGlEAlSRGA~~~~~vE~~~~a~~~l~~N~~~l~~~~~~~~~~~da~~~  105 (187)
T COG0742          28 RVREALFNILAPDEI--EGARVLDLFAGSGALGLEALSRGAARVVFVEKDRKAVKILKENLKALGLEGEARVLRNDALRA  105 (187)
T ss_pred             HHHHHHHHHCCCCCC--CCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECHHHH
T ss_conf             888999987343445--798899946876476899985788569999659899999999999848761259984008999


Q ss_pred             HHHHHHCCCCCCCCCCHHCCCCCCEEEECCCCC-CHHHHHHHHHH-------CCCCEEEEECCHH
Q ss_conf             898862332222321010147877999869702-63489999985-------3994899929989
Q gi|254781000|r  270 TQAMRREREFNRLKDIDIHSYRFKTIFVDPPRS-GLDDATVGMVQ-------AYPHILYISCNPD  326 (371)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~-G~~~~~~~~~~-------~~~~ivYVSCnp~  326 (371)
T Consensus       106 L~~~~~~-------------~~FDlVflDPPy~~~l~~~~~~~~~~~~~~~L~~~~~iv~E~~~~  157 (187)
T COG0742         106 LKQLGTR-------------EPFDLVFLDPPYAKGLLDKELALLLLEENGWLKPGALIVVEHDKD  157 (187)
T ss_pred             HHHCCCC-------------CCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
T ss_conf             8722778-------------851289968997536066899998887658778896899982787