HHsearch alignment for GI: 254781000 and conserved domain: COG2519

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis].

Probab=98.08  E-value=3.2e-05  Score=53.28  Aligned_cols=101  Identities=21%  Similarity=0.194  Sum_probs=74.3

Q ss_pred             ECCCCCC-CEEEEECCCCCHHHHHHHH---CCCEEEEECCCHHHHHHHHHHHHHCCCCC-EEEEECCHHHHHHHHHHCCC
Q ss_conf             1147788-3388602464235888850---68569984475889999999788608996-49997689999898862332
Q gi|254781000|r  204 AATKGIQ-GDLLELYCGNGNFSLVLAR---HFDRVLAVEIAKPSVEAARYNIAANHVNN-VKIVRMSSKEFTQAMRRERE  278 (371)
Q Consensus       204 ~~~~~~~-~~vlDLycG~G~fsl~La~---~~~~V~gvE~~~~ai~~A~~Na~~N~i~n-~~f~~~~a~~~~~~~~~~~~  278 (371)
T Consensus        88 ~~~gi~pg~rVlEAGtGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~-------  160 (256)
T COG2519          88 ARLGISPGSRVLEAGTGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGID-------  160 (256)
T ss_pred             HHCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC-------
T ss_conf             8709998878998156805999999996488845999995278999999999984245613787054000246-------


Q ss_pred             CCCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHHH---CCC--CEEEEECC
Q ss_conf             22232101014787799986970263489999985---399--48999299
Q gi|254781000|r  279 FNRLKDIDIHSYRFKTIFVDPPRSGLDDATVGMVQ---AYP--HILYISCN  324 (371)
Q Consensus       279 ~~~~~~~~~~~~~~d~vilDPPR~G~~~~~~~~~~---~~~--~ivYVSCn  324 (371)
T Consensus       161 ----------~~~vDav~LDmp~P---W~~le~~~~~Lkpgg~~~~y~P~v  198 (256)
T COG2519         161 ----------EEDVDAVFLDLPDP---WNVLEHVSDALKPGGVVVVYSPTV  198 (256)
T ss_pred             ----------CCCCCEEEECCCCH---HHHHHHHHHHHCCCCEEEEECCCH
T ss_conf             ----------55467799758984---899999998717996799983978