HHsearch alignment for GI: 254781000 and conserved domain: COG2890

Probab=99.35  E-value=3.7e-12  Score=98.53  Aligned_cols=105  Identities=25%  Similarity=0.322  Sum_probs=75.4

Q ss_pred             EEEEEECCHHHHCCCHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHHHHCCC--EEEEECCCHHHHHHHHHHHHHC
Q ss_conf             27999764133123577877554420111477883388602464235888850685--6998447588999999978860
Q gi|254781000|r  177 TLIYRQIENSFTQPNAGINVHMLEWVLAATKGIQGDLLELYCGNGNFSLVLARHFD--RVLAVEIAKPSVEAARYNIAAN  254 (371)
Q Consensus       177 ~~~f~i~p~sFfQ~N~~~~~~l~~~v~~~~~~~~~~vlDLycG~G~fsl~La~~~~--~V~gvE~~~~ai~~A~~Na~~N  254 (371)
T Consensus        80 gl~~~v~~~vliP--r~dTe~Lve~~l~~~~~~~~~ilDlGTGSG~iai~la~~~~~~~V~a~Dis~~Al~~A~~Na~~~  157 (280)
T COG2890          80 GLRFKVDEGVLIP--RPDTELLVEAALALLLQLDKRILDLGTGSGAIAIALAKEGPDAEVIAVDISPDALALARENAERN  157 (280)
T ss_pred             CCEEEECCCCCCC--CCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf             6345347986688--97679999999975111589189965883199999996189887999989999999999999982


Q ss_pred             CCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEECCCC
Q ss_conf             89964999768999989886233222232101014787799986970
Q gi|254781000|r  255 HVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHSYRFKTIFVDPPR  301 (371)
Q Consensus       255 ~i~n~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR  301 (371)
T Consensus       158 ~l~~~~~~~~dlf~~-----------------~~~-~fDlIVsNPPY  186 (280)
T COG2890         158 GLVRVLVVQSDLFEP-----------------LRG-KFDLIVSNPPY  186 (280)
T ss_pred             CCCCEEEEECCHHHC-----------------CCC-CCCEEEECCCC
T ss_conf             897479874003334-----------------688-85779968998