HHsearch alignment for GI: 254781000 and conserved domain: KOG2904

Probab=98.77  E-value=2.3e-08  Score=73.75  Aligned_cols=113  Identities=16%  Similarity=0.217  Sum_probs=78.4

Q ss_pred             EEEEEECCHHHHCCCHHHHHHHHHHEEECCCCCC----CEEEEECCCCCHHHHHHHHCC--CEEEEECCCHHHHHHHHHH
Q ss_conf             2799976413312357787755442011147788----338860246423588885068--5699844758899999997
Q gi|254781000|r  177 TLIYRQIENSFTQPNAGINVHMLEWVLAATKGIQ----GDLLELYCGNGNFSLVLARHF--DRVLAVEIAKPSVEAARYN  250 (371)
Q Consensus       177 ~~~f~i~p~sFfQ~N~~~~~~l~~~v~~~~~~~~----~~vlDLycG~G~fsl~La~~~--~~V~gvE~~~~ai~~A~~N  250 (371)
T Consensus       114 ~l~l~~~pgVlIP--RpETEE~V~~Vid~~~~~~~~~~~~ildlgtGSGaIslsll~~L~~~~v~AiD~S~~Ai~La~eN  191 (328)
T KOG2904         114 DLDLVCKPGVLIP--RPETEEWVEAVIDALNNSEHSKHTHILDLGTGSGAISLSLLHGLPQCTVTAIDVSKAAIKLAKEN  191 (328)
T ss_pred             CCEEEECCCEEEC--CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHH
T ss_conf             8548723874326--84679999999999755653266668870578318899998347873489985328899999988


Q ss_pred             HHHCCCCC-EEEEECCHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEECCCCC
Q ss_conf             88608996-49997689999898862332222321010147877999869702
Q gi|254781000|r  251 IAANHVNN-VKIVRMSSKEFTQAMRREREFNRLKDIDIHSYRFKTIFVDPPRS  302 (371)
Q Consensus       251 a~~N~i~n-~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~  302 (371)
T Consensus       192 ~qr~~l~g~i~v~~~~me~--------d~~~~~~---l~~~~~dllvsNPPYI  233 (328)
T KOG2904         192 AQRLKLSGRIEVIHNIMES--------DASDEHP---LLEGKIDLLVSNPPYI  233 (328)
T ss_pred             HHHHHHCCCEEEEECCCCC--------CCCCCCC---CCCCCEEEEECCCCCC
T ss_conf             9987415846898412220--------1256554---5457524885389965