HHsearch alignment for GI: 254781000 and conserved domain: PRK00121
>PRK00121 trmB tRNA (guanine-N(7)-)-methyltransferase; Reviewed.
Probab=97.95 E-value=0.00027 Score=47.24 Aligned_cols=121 Identities=16% Similarity=0.229 Sum_probs=90.0
Q ss_pred EEEEECCCCCHHHHHHHHCC--CEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHCC
Q ss_conf 38860246423588885068--5699844758899999997886089964999768999989886233222232101014
Q gi|254781000|r 212 DLLELYCGNGNFSLVLARHF--DRVLAVEIAKPSVEAARYNIAANHVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHS 289 (371)
Q Consensus 212 ~vlDLycG~G~fsl~La~~~--~~V~gvE~~~~ai~~A~~Na~~N~i~n~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 289 (371)
T Consensus 57 ~~lEIGfG~G~~l~~~A~~~P~~~fIGiE~~~~gv~~~~~~~~~~~l~Ni~i~~~da~~~l~~~~~~~s~~--------- 127 (229)
T PRK00121 57 IHLEIGFGRGEFLVEMAKANPDINFIGIEIHEPGVAKALKKIEEAGLKNLRLLCGDAVEVLEHFLPDGSLD--------- 127 (229)
T ss_pred EEEEECCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCCCC---------
T ss_conf 39996158969999999868888689999616999999999998299838988347899999714645414---------
Q ss_pred CCCCEEEECC-CCCC------HHHHHHHHHH---CCCCEEEEECCHHHHHHHHH-HHC--CCCEEE
Q ss_conf 7877999869-7026------3489999985---39948999299899988699-842--696799
Q gi|254781000|r 290 YRFKTIFVDP-PRSG------LDDATVGMVQ---AYPHILYISCNPDSLCRDLS-ILS--TTHTIE 342 (371)
Q Consensus 290 ~~~d~vilDP-PR~G------~~~~~~~~~~---~~~~ivYVSCnp~TlarD~~-~l~--~gy~i~ 342 (371)
T Consensus 128 -~i~i~FPDPWpKkrH~KRRli~~~fl~~~~~~Lk~~G~i~~~TD~~~Y~~~~~e~~~~~~~f~~~ 192 (229)
T PRK00121 128 -RIYLNFPDPWPKKRHHKRRLVQPEFLELYARVLKPGGEFHFATDWEEYAEYMLEVFGAHPGFKNL 192 (229)
T ss_pred -EEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEC
T ss_conf -04671799997632024012899999999985799988999818799999999999868693742