HHsearch alignment for GI: 254781000 and conserved domain: PRK00274

>PRK00274 ksgA dimethyladenosine transferase; Reviewed.
Probab=97.17  E-value=0.0036  Score=39.88  Aligned_cols=147  Identities=16%  Similarity=0.158  Sum_probs=92.3

Q ss_pred             CHHHHHHHHHHEEECCCCCC-CEEEEECCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCHHHH
Q ss_conf             57787755442011147788-33886024642358888506856998447588999999978860899649997689999
Q gi|254781000|r  191 NAGINVHMLEWVLAATKGIQ-GDLLELYCGNGNFSLVLARHFDRVLAVEIAKPSVEAARYNIAANHVNNVKIVRMSSKEF  269 (371)
Q Consensus       191 N~~~~~~l~~~v~~~~~~~~-~~vlDLycG~G~fsl~La~~~~~V~gvE~~~~ai~~A~~Na~~N~i~n~~f~~~~a~~~  269 (371)
T Consensus        24 d~~ii~kIv~~----~~~~~~d~VlEIGpG~G~LT~~Ll~~~~~v~aiEiD~~l~~~L~~------~~~~~ii~~D~L~~   93 (267)
T PRK00274         24 DENIIDKIVRA----ADLQPGDRVLEIGPGLGALTEPLLERAAKVTAIEIDRDLAPILRE------TDNLTIIEGDALKV   93 (267)
T ss_pred             CHHHHHHHHHH----CCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCHHHHHHHHH------CCCEEEEECHHHHC
T ss_conf             98999999996----089999907996388888999999626805886368899999850------47869996506647


Q ss_pred             HHHHHHCCCCCCCCCCHHCCCCCCEEEECCCCCCHHHHHHHHHHCCC---CEEEEECCHHHHHHHH--------------
Q ss_conf             89886233222232101014787799986970263489999985399---4899929989998869--------------
Q gi|254781000|r  270 TQAMRREREFNRLKDIDIHSYRFKTIFVDPPRSGLDDATVGMVQAYP---HILYISCNPDSLCRDL--------------  332 (371)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~G~~~~~~~~~~~~~---~ivYVSCnp~TlarD~--------------  332 (371)
T Consensus        94 ~~~~~-------------~~~~~~~vvgNLPY~Iss~il~~~l~~~~~~~~~vl------mvQkEvA~Ri~a~p~~k~y~  154 (267)
T PRK00274         94 DLEEL-------------AEGQPLKVVANLPYNISTPLLFKLLEEAPPIRDMVL------MLQKEVAERIVAKPGSKAYG  154 (267)
T ss_pred             CHHHH-------------CCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHH------HHHHHHHHHHHCCCCCCCCC
T ss_conf             86774-------------567872799558830312899999854754124001------11587777762479997516


Q ss_pred             --HHHCC-CCE---EEEEEEEECCCCCCCEEE-EEEEEECCC
Q ss_conf             --98426-967---999999717989872489-999998561
Q gi|254781000|r  333 --SILST-THT---IERLALFDQFPYTRHMEC-GVLLVRKPS  367 (371)
Q Consensus       333 --~~l~~-gy~---i~~~~~~D~FP~T~HvE~-v~~l~R~~~  367 (371)
T Consensus       155 ~LSv~~q~~~~~~~~~~V~~~~F~P~-PkVdS~vi~l~p~~~  195 (267)
T PRK00274        155 RLSVLLQYYADVEKVFDVPPSAFYPP-PKVDSAVVRLVPKEP  195 (267)
T ss_pred             HHHHHHHHHHHEEEEEEECHHHCCCC-CCCEEEEEEEEECCC
T ss_conf             88999999863312115767765679-874179999997898