HHsearch alignment for GI: 254781000 and conserved domain: PRK00811
>PRK00811 spermidine synthase; Provisional.
Probab=91.83 E-value=0.97 Score=24.07 Aligned_cols=105 Identities=18% Similarity=0.199 Sum_probs=67.8
Q ss_pred CCCCCEEEEECCCCCHHHHHHHH--CCCEEEEECCCHHHHHHHHHHHH-HCC--CC--CEEEEECCHHHHHHHHHHCCCC
Q ss_conf 77883388602464235888850--68569984475889999999788-608--99--6499976899998988623322
Q gi|254781000|r 207 KGIQGDLLELYCGNGNFSLVLAR--HFDRVLAVEIAKPSVEAARYNIA-ANH--VN--NVKIVRMSSKEFTQAMRREREF 279 (371)
Q Consensus 207 ~~~~~~vlDLycG~G~fsl~La~--~~~~V~gvE~~~~ai~~A~~Na~-~N~--i~--n~~f~~~~a~~~~~~~~~~~~~ 279 (371)
T Consensus 76 h~~pk~VLIiGGGDGg~~rE~lkh~~v~~v~~VeiD~~Vi~~~~~~lp~~~~~~~~dprv~~~~~Dg~~fv~~~~----- 150 (283)
T PRK00811 76 HPNPKKVLIIGGGDGGTLREVLKHPSVEKITMVEIDERVVEMSRKYLPEISGGAWDDPRVELVIGDGVKFVRETE----- 150 (283)
T ss_pred CCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCC-----
T ss_conf 899774899568747999998427885679999468999999999838863133029715998278999998452-----
Q ss_pred CCCCCCHHCCCCCCEEEECCCC-CCHHH-----HHHHHHH---CCCC-EEEEECCHH
Q ss_conf 2232101014787799986970-26348-----9999985---3994-899929989
Q gi|254781000|r 280 NRLKDIDIHSYRFKTIFVDPPR-SGLDD-----ATVGMVQ---AYPH-ILYISCNPD 326 (371)
Q Consensus 280 ~~~~~~~~~~~~~d~vilDPPR-~G~~~-----~~~~~~~---~~~~-ivYVSCnp~ 326 (371)
T Consensus 151 ----------~~yDvII~D~tDP~gpa~~Lft~~Fy~~~~~~L~~~Gi~v~Q~~sp~ 197 (283)
T PRK00811 151 ----------NSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEGGIFVAQSESPF 197 (283)
T ss_pred ----------CCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHCCCCCEEEECCCCHH
T ss_conf ----------35548998089988644553459999999985399958999279832