HHsearch alignment for GI: 254781000 and conserved domain: PRK03612

Probab=96.98  E-value=0.032  Score=33.72  Aligned_cols=80  Identities=23%  Similarity=0.250  Sum_probs=59.9

Q ss_pred             CCCCEEEEECCCCCHHHHHHHHC--CCEEEEECCCHHHHHHHHHH---HHHCC--C--CCEEEEECCHHHHHHHHHHCCC
Q ss_conf             78833886024642358888506--85699844758899999997---88608--9--9649997689999898862332
Q gi|254781000|r  208 GIQGDLLELYCGNGNFSLVLARH--FDRVLAVEIAKPSVEAARYN---IAANH--V--NNVKIVRMSSKEFTQAMRRERE  278 (371)
Q Consensus       208 ~~~~~vlDLycG~G~fsl~La~~--~~~V~gvE~~~~ai~~A~~N---a~~N~--i--~n~~f~~~~a~~~~~~~~~~~~  278 (371)
T Consensus       292 ~~p~~VLiiGGGdG~a~revLk~~~ve~v~lVelD~~vv~lar~~~~l~~~n~~a~~DpRv~v~~~Da~~~l~~~~----  367 (516)
T PRK03612        292 PRARRVLILGGGDGLALREVLKYPDVEQVTLVDLDPAVTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLP----  367 (516)
T ss_pred             CCCCEEEEECCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEHHHHHHHHHCC----
T ss_conf             9977389983776087999864899663789951889999998572144441232349964898537899998688----


Q ss_pred             CCCCCCCHHCCCCCCEEEECCCCC
Q ss_conf             222321010147877999869702
Q gi|254781000|r  279 FNRLKDIDIHSYRFKTIFVDPPRS  302 (371)
Q Consensus       279 ~~~~~~~~~~~~~~d~vilDPPR~  302 (371)
T Consensus       368 -----------~~yDvIi~D~pdP  380 (516)
T PRK03612        368 -----------ETFDAIIVDLPDP  380 (516)
T ss_pred             -----------CCCCEEEEECCCC
T ss_conf             -----------8788899818997