HHsearch alignment for GI: 254781000 and conserved domain: PRK09328

Probab=99.45  E-value=6.3e-13  Score=103.50  Aligned_cols=108  Identities=22%  Similarity=0.206  Sum_probs=87.1

Q ss_pred             EEEEEECCHHHHCCCHHHHHHHHHHEEECCCCCCCEEEEECCCCCHHHHHHHHCC--CEEEEECCCHHHHHHHHHHHHHC
Q ss_conf             2799976413312357787755442011147788338860246423588885068--56998447588999999978860
Q gi|254781000|r  177 TLIYRQIENSFTQPNAGINVHMLEWVLAATKGIQGDLLELYCGNGNFSLVLARHF--DRVLAVEIAKPSVEAARYNIAAN  254 (371)
Q Consensus       177 ~~~f~i~p~sFfQ~N~~~~~~l~~~v~~~~~~~~~~vlDLycG~G~fsl~La~~~--~~V~gvE~~~~ai~~A~~Na~~N  254 (371)
T Consensus        79 g~~f~V~~~VLIP--RPETE~LVe~~l~~~~~~~~~ilDlgtGSGcI~isLa~~~p~~~v~a~DiS~~Al~~A~~Na~~~  156 (277)
T PRK09328         79 SLPLFVSPATLIP--RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEVTAVDRMPDAVALAQRNAQHL  156 (277)
T ss_pred             EEEEEECCCEEEE--CCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC
T ss_conf             2589877983640--88179999999996453788189954556999999998677989999648999999999999980


Q ss_pred             CCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEECCCCCC
Q ss_conf             8996499976899998988623322223210101478779998697026
Q gi|254781000|r  255 HVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHSYRFKTIFVDPPRSG  303 (371)
Q Consensus       255 ~i~n~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~G  303 (371)
T Consensus       157 ~l~~v~~~~~d~~~~~-----------------~~~~fDlIVSNPPYI~  188 (277)
T PRK09328        157 AIKNVRILQSDWFSAL-----------------SGQQFAMIVSNPPYID  188 (277)
T ss_pred             CCCEEEEEECCCHHHC-----------------CCCCCCEEEECCCCCC
T ss_conf             9886999944752113-----------------7877788997899877