HHsearch alignment for GI: 254781000 and conserved domain: PRK09489

Probab=98.99  E-value=2.5e-09  Score=80.05  Aligned_cols=107  Identities=27%  Similarity=0.479  Sum_probs=80.0

Q ss_pred             EEEEEECCHHHHCCCHHHHH-HHHHHEEECCCCCCCEEEEECCCCCHHHHHHHHCC--CEEEEECCCHHHHHHHHHHHHH
Q ss_conf             27999764133123577877-55442011147788338860246423588885068--5699844758899999997886
Q gi|254781000|r  177 TLIYRQIENSFTQPNAGINV-HMLEWVLAATKGIQGDLLELYCGNGNFSLVLARHF--DRVLAVEIAKPSVEAARYNIAA  253 (371)
Q Consensus       177 ~~~f~i~p~sFfQ~N~~~~~-~l~~~v~~~~~~~~~~vlDLycG~G~fsl~La~~~--~~V~gvE~~~~ai~~A~~Na~~  253 (371)
T Consensus       166 ~l~v~slPGVFS~~~lD~GS~lLL~~l~~---~~~g~VLDlGCG~Gvi~~~la~~~p~~~v~l~Dv~a~Al~~ar~nl~~  242 (342)
T PRK09489        166 GLTVKTLPGVFSRDGLDVGSQLLLSTLTP---HTKGKVLDVGCGAGVLSAVLAQHSPKIRLTLCDVSAPAVEASRATLAA  242 (342)
T ss_pred             CEEEECCCCCCCCCCCCHHHHHHHHHCCC---CCCCCEEEECCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf             71583368757899978799999973783---248847860678179999999869997699996889999999998998


Q ss_pred             CCCCCEEEEECCHHHHHHHHHHCCCCCCCCCCHHCCCCCCEEEECCC-CCCHH
Q ss_conf             08996499976899998988623322223210101478779998697-02634
Q gi|254781000|r  254 NHVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHSYRFKTIFVDPP-RSGLD  305 (371)
Q Consensus       254 N~i~n~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilDPP-R~G~~  305 (371)
T Consensus       243 N~l~~-~v~~sd~~~~-----------------v-~~~fD~IvsNPPFH~G~~  276 (342)
T PRK09489        243 NGLEG-EVFASNVFSE-----------------I-KGRFDMIISNPPFHDGIQ  276 (342)
T ss_pred             HCCCC-EEEECCCCCC-----------------C-CCCCCEEEECCCCCCCCC
T ss_conf             09886-8997564456-----------------5-567898996885215752