HHsearch alignment for GI: 254781000 and conserved domain: TIGR00406
>TIGR00406 prmA ribosomal protein L11 methyltransferase; InterPro: IPR004498 Ribosomal protein L11 methyltransferase (2.1.1 from EC) is required for the methylation of ribosomal protein L11. It forms a bifunctional operon in Escherichia coli with panF (pantothenate transport).; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=98.73 E-value=8.7e-08 Score=70.01 Aligned_cols=82 Identities=20% Similarity=0.233 Sum_probs=63.3
Q ss_pred EEEEEECCHHHHCCCHHHHHHHHHHEEECCCCCC--CEEEEECCCCCHHHHHHHH-CCCEEEEECCCHHHHHHHHHHHHH
Q ss_conf 2799976413312357787755442011147788--3388602464235888850-685699844758899999997886
Q gi|254781000|r 177 TLIYRQIENSFTQPNAGINVHMLEWVLAATKGIQ--GDLLELYCGNGNFSLVLAR-HFDRVLAVEIAKPSVEAARYNIAA 253 (371)
Q Consensus 177 ~~~f~i~p~sFfQ~N~~~~~~l~~~v~~~~~~~~--~~vlDLycG~G~fsl~La~-~~~~V~gvE~~~~ai~~A~~Na~~ 253 (371)
T Consensus 162 ~~~~~lDPGlAFGTGtH~TT~LCLe~L~~~d~k~kh~~viD~GCGSGIL~IAa~~LGa~~~~g~D~DP~Ave~~r~N~~l 241 (330)
T TIGR00406 162 ALIIMLDPGLAFGTGTHPTTSLCLELLEDLDLKDKHKKVIDVGCGSGILSIAALKLGAAKVVGIDIDPLAVESARKNAEL 241 (330)
T ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHH
T ss_conf 13677567645688974578999998740147776654787126717899999975123112213772899999976874
Q ss_pred CCCCC
Q ss_conf 08996
Q gi|254781000|r 254 NHVNN 258 (371)
Q Consensus 254 N~i~n 258 (371)
T Consensus 242 N~v~~ 246 (330)
T TIGR00406 242 NQVSD 246 (330)
T ss_pred CCCCH
T ss_conf 58864