HHsearch alignment for GI: 254781000 and conserved domain: TIGR00536

>TIGR00536 hemK_fam methyltransferase, HemK family; InterPro: IPR004556 The gene hemK from Escherichia coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase . Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity . Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both Escherichia coli and Haemophilus influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain.; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=96.90  E-value=0.0017  Score=42.05  Aligned_cols=85  Identities=21%  Similarity=0.281  Sum_probs=67.4

Q ss_pred             CEEEEECCCCCHHHHHHHHCC----CEEEEECCCHHHHHHHHHHHHHCCCCC-EEEEECCHHHHHHHHHHCCCCCCCCCC
Q ss_conf             338860246423588885068----569984475889999999788608996-499976899998988623322223210
Q gi|254781000|r  211 GDLLELYCGNGNFSLVLARHF----DRVLAVEIAKPSVEAARYNIAANHVNN-VKIVRMSSKEFTQAMRREREFNRLKDI  285 (371)
Q Consensus       211 ~~vlDLycG~G~fsl~La~~~----~~V~gvE~~~~ai~~A~~Na~~N~i~n-~~f~~~~a~~~~~~~~~~~~~~~~~~~  285 (371)
T Consensus       128 ~~~~d~~~g~g~~~~~~~~~~~pc~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  194 (311)
T TIGR00536       128 LHILDLGTGSGCIALALAYEFPPCNAEVIAVDLSPDALALAEENAEKLGLEGRVELLQSDLLEPLPG-------------  194 (311)
T ss_pred             CHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHH-------------
T ss_conf             0111014563156665543046666226641122367888887677643201200101124443320-------------


Q ss_pred             HHCCC-CCCEEEECCCCCCHHHHHHH
Q ss_conf             10147-87799986970263489999
Q gi|254781000|r  286 DIHSY-RFKTIFVDPPRSGLDDATVG  310 (371)
Q Consensus       286 ~~~~~-~~d~vilDPPR~G~~~~~~~  310 (371)
T Consensus       195 --~~~p~~~~~~~~ppy~~~~~~~~~  218 (311)
T TIGR00536       195 --LGGPKLDLLVSNPPYIDEEDLADL  218 (311)
T ss_pred             --CCCCCEEEEECCCCCCCHHHHHHH
T ss_conf             --366522366458865441345553