HHsearch alignment for GI: 254781000 and conserved domain: TIGR00677

>TIGR00677 fadh2_euk methylenetetrahydrofolate reductase; InterPro: IPR004621 The enzyme activities methylenetetrahydrofolate reductase (1.5.1.20 from EC) and 5,10-methylenetetrahydrofolate reductase (FADH) (1.7.99.5 from EC) differ in that the former (assigned in many eukaryotes) is defined to use NADP+ as an acceptor, while the latter (assigned in many bacteria) is flexible with respect to the acceptor. Both convert 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. From a larger set of proteins assigned as one or the other, this family describes the subset of proteins found in eukaryotes, and currently designated methylenetetrahydrofolate reductase (1.5.1.20 from EC). This protein is an FAD-containing flavoprotein.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process.
Probab=92.15  E-value=0.18  Score=28.89  Aligned_cols=74  Identities=15%  Similarity=0.079  Sum_probs=52.9

Q ss_pred             HHHHHHHHHHEEEC-CCC-CCC--EE-E----EECCCCCHHHHHHHHCCCEEEEE---------CCCHHHHHHHHHHHHH
Q ss_conf             77877554420111-477-883--38-8----60246423588885068569984---------4758899999997886
Q gi|254781000|r  192 AGINVHMLEWVLAA-TKG-IQG--DL-L----ELYCGNGNFSLVLARHFDRVLAV---------EIAKPSVEAARYNIAA  253 (371)
Q Consensus       192 ~~~~~~l~~~v~~~-~~~-~~~--~v-l----DLycG~G~fsl~La~~~~~V~gv---------E~~~~ai~~A~~Na~~  253 (371)
T Consensus        12 ~~Gv~NL~~RmDRMy~A~G~P~FiDvTWhPaGgAGG~~~~~t~~ias~~q~~~~~et~MHLTCTN~~~e~ID~AL~~~~~   91 (312)
T TIGR00677        12 EEGVQNLYERMDRMYVALGGPLFIDVTWHPAGGAGGTTAELTLTIASTAQNVLGVETCMHLTCTNMPIEMIDDALERAKS   91 (312)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             04567789988999972689727887300588878861456699999987551455300355789757889999999986


Q ss_pred             CCCCCEEEEECC
Q ss_conf             089964999768
Q gi|254781000|r  254 NHVNNVKIVRMS  265 (371)
Q Consensus       254 N~i~n~~f~~~~  265 (371)
T Consensus        92 ~G~~NiLALRGD  103 (312)
T TIGR00677        92 NGIQNILALRGD  103 (312)
T ss_pred             CCCCEEECCCCC
T ss_conf             565334003761