HHsearch alignment for GI: 254781000 and conserved domain: TIGR00677
>TIGR00677 fadh2_euk methylenetetrahydrofolate reductase; InterPro: IPR004621 The enzyme activities methylenetetrahydrofolate reductase (1.5.1.20 from EC) and 5,10-methylenetetrahydrofolate reductase (FADH) (1.7.99.5 from EC) differ in that the former (assigned in many eukaryotes) is defined to use NADP+ as an acceptor, while the latter (assigned in many bacteria) is flexible with respect to the acceptor. Both convert 5-methyltetrahydrofolate to 5,10-methylenetetrahydrofolate. From a larger set of proteins assigned as one or the other, this family describes the subset of proteins found in eukaryotes, and currently designated methylenetetrahydrofolate reductase (1.5.1.20 from EC). This protein is an FAD-containing flavoprotein.; GO: 0004489 methylenetetrahydrofolate reductase (NADPH) activity, 0006555 methionine metabolic process.
Probab=92.15 E-value=0.18 Score=28.89 Aligned_cols=74 Identities=15% Similarity=0.079 Sum_probs=52.9
Q ss_pred HHHHHHHHHHEEEC-CCC-CCC--EE-E----EECCCCCHHHHHHHHCCCEEEEE---------CCCHHHHHHHHHHHHH
Q ss_conf 77877554420111-477-883--38-8----60246423588885068569984---------4758899999997886
Q gi|254781000|r 192 AGINVHMLEWVLAA-TKG-IQG--DL-L----ELYCGNGNFSLVLARHFDRVLAV---------EIAKPSVEAARYNIAA 253 (371)
Q Consensus 192 ~~~~~~l~~~v~~~-~~~-~~~--~v-l----DLycG~G~fsl~La~~~~~V~gv---------E~~~~ai~~A~~Na~~ 253 (371)
T Consensus 12 ~~Gv~NL~~RmDRMy~A~G~P~FiDvTWhPaGgAGG~~~~~t~~ias~~q~~~~~et~MHLTCTN~~~e~ID~AL~~~~~ 91 (312)
T TIGR00677 12 EEGVQNLYERMDRMYVALGGPLFIDVTWHPAGGAGGTTAELTLTIASTAQNVLGVETCMHLTCTNMPIEMIDDALERAKS 91 (312)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 04567789988999972689727887300588878861456699999987551455300355789757889999999986
Q ss_pred CCCCCEEEEECC
Q ss_conf 089964999768
Q gi|254781000|r 254 NHVNNVKIVRMS 265 (371)
Q Consensus 254 N~i~n~~f~~~~ 265 (371)
T Consensus 92 ~G~~NiLALRGD 103 (312)
T TIGR00677 92 NGIQNILALRGD 103 (312)
T ss_pred CCCCEEECCCCC
T ss_conf 565334003761