HHsearch alignment for GI: 254781000 and conserved domain: TIGR02987
>TIGR02987 met_A_Alw26 type II restriction m6 adenine DNA methyltransferase, Alw26I/Eco31I/Esp3I family; InterPro: IPR014329 Members of this entry are the m6-adenine DNA methyltransferase protein, or a fusion protein that also carries m5 cytosine methyltransferase activity of type II restriction systems of the Alw26I/Eco31I/Esp3I family. A type II restriction endonuclease always accompanies a methyltransferase of this type from Alw26I/Eco31I/Esp3I(IPR014328 from INTERPRO) and by an adenine-specific modification methyltransferase. Members of this are unusual in that the regions of similarity to homologues outside this family are circularly permuted..
Probab=96.69 E-value=0.0096 Score=37.14 Aligned_cols=123 Identities=14% Similarity=0.280 Sum_probs=73.4
Q ss_pred HHHHCCCHHHHHHHHHHEEECCCCCC------CEEEEECCCCCHHHHHHHHCC--------------CEEEEECCCHHHH
Q ss_conf 13312357787755442011147788------338860246423588885068--------------5699844758899
Q gi|254781000|r 185 NSFTQPNAGINVHMLEWVLAATKGIQ------GDLLELYCGNGNFSLVLARHF--------------DRVLAVEIAKPSV 244 (371)
Q Consensus 185 ~sFfQ~N~~~~~~l~~~v~~~~~~~~------~~vlDLycG~G~fsl~La~~~--------------~~V~gvE~~~~ai 244 (371)
T Consensus 4 G~yf-T~~~~~~~m~~~l~~~~~~~~~~nI~~~~~~DP~~G~G~Li~~~L~~~~~i~~~~~~i~~~~~~~~~~Di~~~~L 82 (603)
T TIGR02987 4 GTYF-TPLDLAKEMVKELVKEIDKNDKSNIEKLKIIDPCCGDGRLIALLLKKFEEINLFKEQIEKVELNIYLADIDKTLL 82 (603)
T ss_pred CEEE-CCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEECCCHHHH
T ss_conf 1252-768999999999987517653000415453357527649999999986643034023233111000231444799
Q ss_pred HHHHHHHHHCC-------CCCEEEEE--CCHHHHHHHHHHCCCCCCCCCCHHCC---CCCCEEEECCCCCCHHHHHHH
Q ss_conf 99999788608-------99649997--68999989886233222232101014---787799986970263489999
Q gi|254781000|r 245 EAARYNIAANH-------VNNVKIVR--MSSKEFTQAMRREREFNRLKDIDIHS---YRFKTIFVDPPRSGLDDATVG 310 (371)
Q Consensus 245 ~~A~~Na~~N~-------i~n~~f~~--~~a~~~~~~~~~~~~~~~~~~~~~~~---~~~d~vilDPPR~G~~~~~~~ 310 (371)
T Consensus 83 ~~~~~~~~~~~k~~F~~~~~-~~~~~~~~~~~~~~~~~~~~-EYI~~~~~F~~EV~keGFD~~ItNPPy~~~K~dk~~ 158 (603)
T TIGR02987 83 ERASKLLSELAKLLFALEIS-IILTNSLSDVFLLIEEYKEK-EYIKLEDVFGDEVKKEGFDIVITNPPYKNLKPDKKE 158 (603)
T ss_pred HHHHHHHHHHHHHHHHCCCC-EEECCHHHHHHHHHHHHCCC-CCEEEEECCCCCEEECCCEEEEECCCCCCCCCCCCC
T ss_conf 99999887876665423775-10011023444545542010-222545015532001574179977888554445100