HHsearch alignment for GI: 254781000 and conserved domain: pfam08123
>pfam08123 DOT1 Histone methylation protein DOT1. The DOT1 domain regulates gene expression by methylating histone H3. H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast.
Probab=97.18 E-value=0.002 Score=41.64 Aligned_cols=108 Identities=19% Similarity=0.120 Sum_probs=62.3
Q ss_pred HHHEEECCCCCCCEE-EEECCCCCHHHHHHH--HCCCEEEEECCCHHHHHHHHHHHHHC-------CC--CCEEEEECCH
Q ss_conf 442011147788338-860246423588885--06856998447588999999978860-------89--9649997689
Q gi|254781000|r 199 LEWVLAATKGIQGDL-LELYCGNGNFSLVLA--RHFDRVLAVEIAKPSVEAARYNIAAN-------HV--NNVKIVRMSS 266 (371)
Q Consensus 199 ~~~v~~~~~~~~~~v-lDLycG~G~fsl~La--~~~~~V~gvE~~~~ai~~A~~Na~~N-------~i--~n~~f~~~~a 266 (371)
T Consensus 31 is~ii~~~~l~~~dvF~DLGSGVGnvv~QaAl~tgc~~s~GiEi~~~~a~~A~~~~~~~~~~~~~~G~~~~~~~l~~gdF 110 (205)
T pfam08123 31 LSDVLDKCNLGPQDVFVDLGSGVGNCVLQAALEFGCKLSFGCEIMDNASNLAELQDEEFKKRCKLFGKKLGKIEFIRGSF 110 (205)
T ss_pred HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 99999983989768899858883299999998709653888886566899999999999999999588768738997777
Q ss_pred HHHHHHHHHCCCCCCCCCCHHCCCCCCEEEECCCCCC--HHHHHHHHHHCCC---CEE
Q ss_conf 9998988623322223210101478779998697026--3489999985399---489
Q gi|254781000|r 267 KEFTQAMRREREFNRLKDIDIHSYRFKTIFVDPPRSG--LDDATVGMVQAYP---HIL 319 (371)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~vilDPPR~G--~~~~~~~~~~~~~---~iv 319 (371)
T Consensus 111 l~-------------~~~~~~~~~~a~VI~vNN~~F~~~Ln~~L~e~f~~lk~GtkIV 155 (205)
T pfam08123 111 LD-------------NERVEEIIPEADVILVNNFAFDPELNLQLKEMLQDLKDGCKII 155 (205)
T ss_pred CC-------------CHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 88-------------5889986347988999432469889999999997299988899