PSIBLAST alignment of GI: 254781000 and protein with PDB id: 2bh2

gi|62738954|pdb|2BH2|A Chain A, Crystal Structure Of E. Coli 5-Methyluridine Methyltransferase Ruma In Complex With Ribosomal Rna Substrate And S-Adenosylhomocysteine. Length = 433
>gi|62738955|pdb|2BH2|B Chain B, Crystal Structure Of E. Coli 5-Methyluridine Methyltransferase Ruma In Complex With Ribosomal Rna Substrate And S-Adenosylhomocysteine. Length = 433
 Score =  253 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 84/367 (22%), Positives = 140/367 (38%), Gaps = 30/367 (8%)

Query: 3   GTLLIDQYEQQLAEKVDRLRQMMLAFQVPNLQIFRSEPIHYRMRAEFHIWH--DGDDLYH 60
                   + Q   K   L ++M        ++    P  YR RA   + +      L  
Sbjct: 90  CQQQHASVDLQQRSKSAALARLMKH---DVSEVIADVPWGYRRRARLSLNYLPKTQQLQM 146

Query: 61  IMFDQQTKERMRIDYFMPGSLLINALMIEMMATIRLEPLLRAKLFQIDYLTSQSDQAIVT 120
                 + + + +      +  + AL+ ++ A +     +R  L  ++ + + S   ++ 
Sbjct: 147 GFRKAGSSDIVDVKQCPILAPQLEALLPKVRACLGSLQAMRH-LGHVELVQATSGTLMI- 204

Query: 121 LIYHRLLDDAWRECAIRLRDALHARKYQIQLIGRANKTKICLDRDYVDERLTVAGRTLIY 180
           L +   L  A RE   R     H+    + L   +   +         E        L  
Sbjct: 205 LRHTAPLSSADREKLERFS---HSEGLDLYLAPDSEILETVSG-----EMPWYDSNGLRL 256

Query: 181 RQIENSFTQPNAGINVHMLEWVLAATKGIQ-GDLLELYCGNGNFSLVLARHFDRVLAVEI 239
                 F Q NAG+N  M+   L          +L+L+CG GNF+L LA     V+ VE 
Sbjct: 257 TFSPRDFIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEG 316

Query: 240 AKPSVEAARYNIAANHVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHSYRFKTIFVDP 299
               VE  + N   N + NV     + +E             +         F  + +DP
Sbjct: 317 VPALVEKGQQNARLNGLQNVTFYHENLEE------------DVTKQPWAKNGFDKVLLDP 364

Query: 300 PRSGLDDATVGMVQAYP-HILYISCNPDSLCRDL-SILSTTHTIERLALFDQFPYTRHME 357
            R+G       +++  P  I+Y+SCNP +L RD  ++L   +TI RLA+ D FP+T H+E
Sbjct: 365 ARAGAAGVMQQIIKLEPIRIVYVSCNPATLARDSEALLKAGYTIARLAMLDMFPHTGHLE 424

Query: 358 CGVLLVR 364
             VL  R
Sbjct: 425 SMVLFSR 431