RPSBLAST alignment for GI: 254781000 and conserved domain: PRK13168

>gnl|CDD|183875 PRK13168, rumA, 23S rRNA m(5)U1939 methyltransferase; Reviewed. Length = 443

 Score = 97.5 bits (244), Expect = 5e-21
 Identities = 61/183 (33%), Positives = 90/183 (49%), Gaps = 33/183 (18%)

Query: 187 FTQPNAGINVHM----LEWVLAATKGIQGD-LLELYCGNGNFSLVLARHFDRVLAVEIAK 241
           F Q NA +N  M    LEW L    G   D +L+L+CG GNF+L LAR    V+ VE  +
Sbjct: 274 FIQVNAQVNQKMVARALEW-LDPQPG---DRVLDLFCGLGNFTLPLARQAAEVVGVEGVE 329

Query: 242 PSVEAARYNIAANHVNNVKIVRMS-SKEFTQAMRREREFNRLKDIDIHSYRFKTIFVDPP 300
             VE AR N   N ++NV     +  ++FT        F++             + +DPP
Sbjct: 330 AMVERARENARRNGLDNVTFYHANLEEDFTDQPWALGGFDK-------------VLLDPP 376

Query: 301 RSGLDDATVGMVQAYP-----HILYISCNPDSLCRDLSIL-STTHTIERLALFDQFPYTR 354
           R+G       ++QA        I+Y+SCNP +L RD  +L    + ++R  + D FP+T 
Sbjct: 377 RAG----AAEVMQALAKLGPKRIVYVSCNPATLARDAGVLVEAGYRLKRAGMLDMFPHTG 432

Query: 355 HME 357
           H+E
Sbjct: 433 HVE 435