RPSBLAST alignment for GI: 254781000 and conserved domain: COG2265
>gnl|CDD|32446 COG2265, TrmA, SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase [Translation, ribosomal structure and biogenesis]. Length = 432
Score = 269 bits (689), Expect = 9e-73
Identities = 112/363 (30%), Positives = 167/363 (46%), Gaps = 27/363 (7%)
Query: 9 QYEQQLAEKVDRLRQMM----LAFQVPNLQIFRSEPIHYRMRAEFHIWHDGDD-LYHIMF 63
YE QL K ++L++++ + + + S P YR RA F + G L F
Sbjct: 84 SYEAQLEFKREQLKELLKRIGGSEVEIDPTVGMSPPWGYRNRARFSVRGSGKGQLLAGFF 143
Query: 64 DQQTKERMRID---YFMPGSLLINALMIEMMATIRLEPLLRAKLFQIDYLTSQSDQAIVT 120
Q + E + ID F P S I L+ E++A + L P K I L + V
Sbjct: 144 RQGSHEIVDIDECPVFPPRSNEILPLLRELLAKLGLPPYNEKKKKGILRLIVLREGQEVM 203
Query: 121 LIYHRLLDDAWRECAIRLRDALHARKYQIQLIGRANKTKICLDRDYVDERLTVAGRTLIY 180
+ + L +A K +Q I RA I D + L + R +
Sbjct: 204 VRLVTKHLPELEQALRELLEAFPEIKGIVQNINRAKTNVIEGDEEITLYGLE-SIREGVS 262
Query: 181 RQIEN-SFTQPNAGINVHMLEWVLAATKGIQGD-LLELYCGNGNFSLVLARHFDRVLAVE 238
QI SF Q N + + E L + G+ +L+LYCG G F L LA+ +V VE
Sbjct: 263 FQISPRSFFQVNPAVAEKLYETALEWLELAGGERVLDLYCGVGTFGLPLAKRVKKVHGVE 322
Query: 239 IAKPSVEAARYNIAANHVNNVKIVRMSSKEFTQAMRREREFNRLKDIDIHSYRFKTIFVD 298
I+ +VEAA+ N AAN ++NV+ + ++EFT A Y+ + VD
Sbjct: 323 ISPEAVEAAQENAAANGIDNVEFIAGDAEEFTPAW-------------WEGYKPDVVVVD 369
Query: 299 PPRSGLDDATVGMVQAY--PHILYISCNPDSLCRDLSILSTTH-TIERLALFDQFPYTRH 355
PPR+G D + + I+Y+SCNP +L RDL+IL++T IER+ FD FP+T H
Sbjct: 370 PPRAGADREVLKQLAKLKPKRIVYVSCNPATLARDLAILASTGYEIERVQPFDMFPHTHH 429
Query: 356 MEC 358
+E
Sbjct: 430 VEA 432