HHsearch alignment for GI: 254781003 and conserved domain: COG2374
>COG2374 Predicted extracellular nuclease [General function prediction only].
Probab=99.86 E-value=5.8e-20 Score=127.15 Aligned_cols=275 Identities=15% Similarity=0.094 Sum_probs=151.6
Q ss_pred CCCCEEEEEEECCCCCC---CCCCCCCCCC-------CCCHHHHHHHHHHHHHHHCCCEEEEEECCCH-------HHHHH
Q ss_conf 78826999983014788---6676667765-------3101889999999998608988999950785-------79998
Q gi|254781003|r 20 VAQKVRLVSWNINTLSE---QEGVSLWKNS-------VKRTTSDYTLLRQYAKNLDADIVFLQEMGSY-------NAVAK 82 (304)
Q Consensus 20 ~~~~lrV~twNi~~~~~---~~~~~~~~~~-------~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~~-------~~~~~ 82 (304)
T Consensus 460 v~G~LkiasfNVlNyf~~~~~~g~~~~~~~d~rga~~~~e~~~Q~~k~v~ai~~ldaDV~GL~Eien~~~~~~s~~ai~~ 539 (798)
T COG2374 460 VGGSLKIASFNVLNYFNKLSGDGGGASTFSDCRGANTTEEFARQRAKIVTAILTLDADVLGLMEIENNGYGTDSGDAIAQ 539 (798)
T ss_pred CCCEEEEEEEEHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHEEEEEECCCCCCCCHHHHHH
T ss_conf 57634431332122420377777775553102476635677787788888886124012102355206777774778999
Q ss_pred HH-------CCC-CCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCC----CC--CCCCCCCCCCCEEEEE
Q ss_conf 60-------333-4307862145567543223446315899825852676530122----46--7655555565336999
Q gi|254781003|r 83 VF-------PKN-TWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPL----LG--AKDSFSRAGNRRAVEL 148 (304)
Q Consensus 83 ~~-------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~r~~~~~ 148 (304)
T Consensus 540 lV~~lna~~G~~~~y~~v~p~~-----~~~lgtD~I~vg~iY~~~~V~~~g~~~~~~~~a~~~v~~~~~~n~R~~laqtF 614 (798)
T COG2374 540 LVNALNAKAGAGTRYAFVAPGR-----NGGLGTDAIRVGFIYKPSAVSLVGKAAIVDNDAFLGVGEIDDNNARPPLAQTF 614 (798)
T ss_pred HHHHHHHHCCCCCEEEEEECCC-----CCCCCCCCEEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 9999986327995289984675-----57767772567889615367763653211553335545566544574056665
Q ss_pred EEEECCEEEEEEEECCCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCEEEEECCCCCCCCCCHHH
Q ss_conf 99829949999994067888775----20000257789999999999999863--0368980999802688877662046
Q gi|254781003|r 149 LVEINGKKIWVLDIHLKSFCFLD----SLENTYSPSCSLLSQQAQWLKDWITQ--KKESLVPFVIAGDFNRKINYLGNND 222 (304)
Q Consensus 149 ~~~~~~~~~~v~n~Hl~~~~~~~----~~~~~~~~~~~~~~~q~~~l~~~~~~--~~~~~~~vIi~GDfN~~~~~~~~~~ 222 (304)
T Consensus 615 ~~~~~~ekfvvVvNHfkSKgs~~p~~gd~~dgQg~~~~~R~~~AqaL~~~la~~~~~~~d~~~viLGD~N~y~~edp--- 691 (798)
T COG2374 615 QDLSGGEKFVVVVNHFKSKGSDCPVDGDTQDGQGNSNQTRVRAAQALAAFLATNPTGKADADIVILGDFNDYAFEDP--- 691 (798)
T ss_pred HHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHCCH---
T ss_conf 32057717999983012668888775656664441046889999999999862856556788799724321310137---
Q ss_pred HHHHHHCCCCCCCCCC-CCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCCEEEEEECCCCCC---------------
Q ss_conf 8987522557531114-456787656466888201479998620431002472178641134554---------------
Q gi|254781003|r 223 DFWKTIDPNDSLIRFP-KEKDSRCNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIK--------------- 286 (304)
Q Consensus 223 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~iD~I~~s~~~~~~~~~~~~~~~~~~~~~~~--------------- 286 (304)
T Consensus 692 --I~~l~~aGy~~l~~~~~~~~~~YSY~f~G~~gtLDhaLas~sl~~~v~~a~ewHINAdE~~~ldYn~~Fk~q~~~~~~ 769 (798)
T COG2374 692 --IQALEGAGYMNLAARFHDAGDRYSYVFNGQSGTLDHALASASLAAQVSGATEWHINADEPDALDYNLEFKGQNVSLYK 769 (798)
T ss_pred --HHHHHHCCCHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCC
T ss_conf --899862483011001057787348998782640766652244552156742653045666232210210356553335
Q ss_pred -CCCCCCCCCCCEEEEEEC
Q ss_conf -445555763438999849
Q gi|254781003|r 287 -SRGKRLSDHCPISIDYDF 304 (304)
Q Consensus 287 -~~~~~~SDH~PV~~~l~f 304 (304)
T Consensus 770 ~~~~fR~SDHDPvvvglnL 788 (798)
T COG2374 770 TTNPFRASDHDPVVVGLNL 788 (798)
T ss_pred CCCCCCCCCCCCEEEEEEE
T ss_conf 6775535789976999870