HHsearch alignment for GI: 254781003 and conserved domain: COG3021
>COG3021 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=99.62 E-value=1e-14 Score=98.46 Aligned_cols=201 Identities=17% Similarity=0.088 Sum_probs=92.6
Q ss_pred HHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCC
Q ss_conf 99999986089889999507857999860333430786214556754322344631589982585267653012246765
Q gi|254781003|r 56 LLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKD 135 (304)
Q Consensus 56 ~l~~~i~~~~~DIi~lQEv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (304)
T Consensus 105 k~Lsl~~~~~~D~v~~~E~~~~~~~~~~~l~~~yP~~~~~~~~----------~~~~~~a~~sr~~~~-------~~~~~ 167 (309)
T COG3021 105 KLLSLIQQLDADAVTTPEGVQLWTAKVGALAAQYPAFILCQHP----------TGVFTLAILSRRPCC-------PLTEA 167 (309)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC----------CCEEEEEECCCCCCC-------CCCCC
T ss_conf 9998876647532221888877676788998749742406899----------872211000346555-------52235
Q ss_pred CCCCCCCCEEEE-EEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC
Q ss_conf 555556533699-9998299499999940678887752000025778999999999999986303689809998026888
Q gi|254781003|r 136 SFSRAGNRRAVE-LLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRK 214 (304)
Q Consensus 136 ~~~~~~~r~~~~-~~~~~~~~~~~v~n~Hl~~~~~~~~~~~~~~~~~~~~~~q~~~l~~~~~~~~~~~~~vIi~GDfN~~ 214 (304)
T Consensus 168 e~~~~~pk~~~~t~~~~~~g~~l~v~~lh~~~~~~~~~~~---------~-~ql~~l~~~i---~~~~gpvIlaGDfNa~ 234 (309)
T COG3021 168 EPWLRLPKSALATAYPLPDGTELTVVALHAVNFPVGTDPQ---------R-AQLLELGDQI---AGHSGPVILAGDFNAP 234 (309)
T ss_pred CCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCHH---------H-HHHHHHHHHH---HCCCCCEEEEECCCCC
T ss_conf 7640177651268998689988999862254566775188---------9-9999999999---7178875886137885
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCEEEEEECCCHHHCCCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 7766204689875225575311144567876564668-882014799986204310024721786411345544455557
Q gi|254781003|r 215 INYLGNNDDFWKTIDPNDSLIRFPKEKDSRCNANKNL-RNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLS 293 (304)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iD~I~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~S 293 (304)
T Consensus 235 pWS~~~~R--~~~l~~~~~~~~aG-~~~~~~~p~~~~r~~g~PIDhvf~rgl~~~--ka-----------~rl~~--~gS 296 (309)
T COG3021 235 PWSRTAKR--MAALGGLRAAPRAG-LWEVRFTPDERRRAFGLPIDHVFYRGLTVM--KA-----------RRLPD--RGS 296 (309)
T ss_pred CHHHHHHH--HHHHCCCCCCHHCC-CCCCCCCHHHHHHCCCCCCCEEEECCCCHH--HH-----------HHCCC--CCC
T ss_conf 05577899--99861643222205-776642777874125898521233586044--33-----------20545--577
Q ss_pred CCCCEEEEEEC
Q ss_conf 63438999849
Q gi|254781003|r 294 DHCPISIDYDF 304 (304)
Q Consensus 294 DH~PV~~~l~f 304 (304)
T Consensus 297 DH~PLLveF~~ 307 (309)
T COG3021 297 DHRPLLVEFSY 307 (309)
T ss_pred CCCCEEEEEEE
T ss_conf 77716899885