HHsearch results for GI: 254781003 and protein with PDBid: 2voa_A

>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus}
Probab=99.91  E-value=1.2e-22  Score=140.61  Aligned_cols=228  Identities=17%  Similarity=0.135  Sum_probs=100.5

Q ss_pred             EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCH--HHHHHHHCCCCCEEEEECCCCCCC
Q ss_conf             699998301478866766677653101889999999998608988999950785--799986033343078621455675
Q gi|254781003|r   24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSY--NAVAKVFPKNTWCIFYSTERLINH  101 (304)
Q Consensus        24 lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~~--~~~~~~~~~~~~~~~~~~~~~~~~  101 (304)
                      +|||||||+++.                .+.+.++++|++.+|||||||||...  ..........++......      
T Consensus         2 mKI~T~NvnG~r----------------~r~~~~~~~i~~~~pDIi~lQEvk~~~~~~~~~~~~~~~~~~~~~~------   59 (257)
T 2voa_A            2 LKIATFNVNSIR----------------SRLHIVIPWLKENKPDILCMQETKVENRKFPEADFHRIGYHVVFSG------   59 (257)
T ss_dssp             EEEEEEECSCGG----------------GTHHHHHHHHHHHCCSEEEEECCCCCGGGCCHHHHHTTTCEEEEEE------
T ss_pred             EEEEEEEECHHH----------------HHHHHHHHHHHHCCCCEEEEEECCCCHHHCCHHHHHHCCCEEEECC------
T ss_conf             199999805299----------------8699889999868996999996766924478878731363146503------


Q ss_pred             CCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHH
Q ss_conf             43223446315899825852676530122467655555565336999998299499999940678887752000025778
Q gi|254781003|r  102 SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSC  181 (304)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~v~n~Hl~~~~~~~~~~~~~~~~~  181 (304)
                          ........+..+.+...........  ..+.     .+.   .....  ..+.++.+|+......+.....     
T Consensus        60 ----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----  118 (257)
T 2voa_A           60 ----SKGRNGVAIASLEEPEDVSFGLDSE--PKDE-----DRL---IRAKI--AGIDVINTYVPQGFKIDSEKYQ-----  118 (257)
T ss_dssp             ----ETTEEEEEEEESSCCEEEEESCSSS--SCCG-----GGE---EEEEE--TTEEEEEEECCCCSCTTSHHHH-----
T ss_pred             ----CCCCCCCEEEECCCCEEEEECCCCC--CCCC-----CEE---EEEEE--CCEEEEEEEEECCCCCCHHHHH-----
T ss_conf             ----4776661133047850588424212--3566-----458---99872--6759999983068779768888-----


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHH---------------HHHHHHHCCCCCCCCCC-----CCC
Q ss_conf             9999999999999863036898099980268887766204---------------68987522557531114-----456
Q gi|254781003|r  182 SLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNN---------------DDFWKTIDPNDSLIRFP-----KEK  241 (304)
Q Consensus       182 ~~~~~q~~~l~~~~~~~~~~~~~vIi~GDfN~~~~~~~~~---------------~~~~~~~~~~~~~~~~~-----~~~  241 (304)
                      ..... ................+++++||||.........               ......+.. ..+.+..     ...
T Consensus       119 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gl~D~~r~~~~~~~  196 (257)
T 2voa_A          119 YKLQW-LERLYHYLQKTVDFRSFAVWCGDMNVAPEPIDVHSPDKLKNHVCFHEDARRAYKKILE-LGFVDVLRKIHPNER  196 (257)
T ss_dssp             HHHHH-HHHHHHHHHHHCCTTSCEEEEEECSCCCSGGGBSCGGGCTTSTTTCHHHHHHHHHHHT-TTCEEHHHHHSTTCC
T ss_pred             HHHHH-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCHHHCCCCCCCCHHHHHHHHHHHH-CCCCCHHHHHCCCCC
T ss_conf             88877-8999999998664202323333101384064335804334666578899999999987-688120154379998


Q ss_pred             CCCCCCCCC-----CCCCCCEEEEEECCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             787656466-----88820147999862043100247217864113455444555576343899984
Q gi|254781003|r  242 DSRCNANKN-----LRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD  303 (304)
Q Consensus       242 ~~~~~~~~~-----~~~~~~iD~I~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~l~  303 (304)
                      ...++.+..     .....||||||+|+++........       ....+..+..+|||+||+++|+
T Consensus       197 ~~~~~~~~~~~~~~~~~g~RIDyIl~s~~l~~~~~~~~-------v~~~~~~~~~~SDH~PV~~~l~  256 (257)
T 2voa_A          197 IYTFYDYRVKGAIERGLGWRGDAILATPPLAERCVDCY-------ADIKPRLAEKPSDHLPLVAVFD  256 (257)
T ss_dssp             CCSBCCTTSTTTTTTTCCBCCEEEEECHHHHTTEEEEE-------ECCHHHHSSSCCSBCCEEEEEC
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHHHCEEE-------EEEEECCCCCCCCCEEEEEEEE
T ss_conf             63106765787434799677799997869986520899-------8651047999998237999998