HHsearch results for GI: 254781003 and protein with PDBid: 3g91_A
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A
Probab=99.89 E-value=1.2e-21 Score=135.20 Aligned_cols=228 Identities=14% Similarity=0.156 Sum_probs=103.2
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCC-HHHH-HHHHCCCCCEEEEECCCCC
Q ss_conf 8269999830147886676667765310188999999999860898899995078-5799-9860333430786214556
Q gi|254781003|r 22 QKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGS-YNAV-AKVFPKNTWCIFYSTERLI 99 (304)
Q Consensus 22 ~~lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~-~~~~-~~~~~~~~~~~~~~~~~~~ 99 (304)
..|||+||||+++. . .+.+.+.++|++.+|||||||||.. ...+ ..+....++...+......
T Consensus 2 ~~mki~SwNvngl~--------------~-~~~~~~~~~i~~~~pDIi~LQEvk~~~~~~~~~~~~~~~~~~~~~~~~~~ 66 (265)
T 3g91_A 2 AVLKIISWNVNGLR--------------A-VHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPAERK 66 (265)
T ss_dssp CEEEEEEEECSCHH--------------H-HHHHTHHHHHHHHCCSEEEEECCCSCGGGSCHHHHCCTTCEEEEECBSST
T ss_pred CCEEEEEEEECCHH--------------H-HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEEEECCCC
T ss_conf 86099999924288--------------8-77773999997589969998815078000898787247861688612223
Q ss_pred CCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHH
Q ss_conf 75432234463158998258526765301224676555555653369999982994999999406788877520000257
Q gi|254781003|r 100 NHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSP 179 (304)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~v~n~Hl~~~~~~~~~~~~~~~ 179 (304)
.....++..+.+........... ... ..... +.... ..+.+.++|+..........
T Consensus 67 --------~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~----- 122 (265)
T 3g91_A 67 --------GYSGVAMYTKVPPSSLREGFGVE------RFD--TEGRI-QIADF--DDFLLYNIYFPNGAMSEERL----- 122 (265)
T ss_dssp --------TSCCEEEEESSCCSEEECCCSCH------HHH--SBSCE-EEEEC--SSCEEEEEECCCCTTCHHHH-----
T ss_pred --------CCCCEEEEECCCCCCCCCCCCCC------CCC--CHHEE-EEEEC--CCEEEEEEECCCCCCCCHHH-----
T ss_conf --------22434786326752000378876------534--02046-75522--98899999605886431125-----
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHH----------------HHHHHHCCCCCCCCCC-----
Q ss_conf 7899999999999998630368980999802688877662046----------------8987522557531114-----
Q gi|254781003|r 180 SCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNND----------------DFWKTIDPNDSLIRFP----- 238 (304)
Q Consensus 180 ~~~~~~~q~~~l~~~~~~~~~~~~~vIi~GDfN~~~~~~~~~~----------------~~~~~~~~~~~~~~~~----- 238 (304)
.........+..........+.+.+++||+|.........+ ......+. .+.+..
T Consensus 123 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~--~~~D~~~~~~~ 198 (265)
T 3g91_A 123 --KYKLEFYDAFLEDVNRERDSGRNVIICGDFNTAHREIDLARPKENSNVSGFLPVERAWIDKFIEN--GYVDTFRMFNS 198 (265)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCSGGGBSCTGGGTTSTTSCHHHHHHHHHHHHT--TEEETHHHHCC
T ss_pred --HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHC--CCEEEEHHHCC
T ss_conf --77889999999999998546784672065102870440468666278968998999876533436--98101242278
Q ss_pred CCCCCCCCCCC----CCCCCCCEEEEEECCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 45678765646----688820147999862043100247217864113455444555576343899984
Q gi|254781003|r 239 KEKDSRCNANK----NLRNKIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYD 303 (304)
Q Consensus 239 ~~~~~~~~~~~----~~~~~~~iD~I~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~l~ 303 (304)
......+++.. ......||||||+|+++..+..... +. ....+|||+||++||+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~RIDyIl~s~~l~~~v~~~~--v~---------~~~~~SDH~PV~~el~ 256 (265)
T 3g91_A 199 DPGQYTWWSYRTRARERNVGWRLDYFFVNEEFKGKVKRSW--IL---------SDVMGSDHCPIGLEIE 256 (265)
T ss_dssp CSCCCSBCCSSTTTTTTTCCBCCEEEEEEGGGGGGEEEEE--EC---------TTCCSSSBCCEEEEEE
T ss_pred CCCCCEECCCCCCCCCCCCCEEEEEEEECHHHHHHCCEEE--EC---------CCCCCCCCCCEEEEEE
T ss_conf 9996143378788755899757589997759970244999--84---------7999999257899999