HHsearch results for GI: 254781003 and protein with PDBid: 3l1w_A
>3l1w_A Uncharacterized protein; APC29019.2, conserved protein, enterococcus faecalis V583, PSI-2, MCSG, structural genomics; 1.60A {Enterococcus faecalis}
Probab=99.97 E-value=4.8e-30 Score=181.04 Aligned_cols=242 Identities=15% Similarity=0.120 Sum_probs=116.4
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCCCCEEEEECCCCCCCCC
Q ss_conf 69999830147886676667765310188999999999860898899995078579998603334307862145567543
Q gi|254781003|r 24 VRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKNTWCIFYSTERLINHSK 103 (304)
Q Consensus 24 lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (304)
||||||||+++.... ....++.+.+.|+++|.+.+|||||||||.... +..+.....+........ +
T Consensus 1 lrI~T~Ni~~~~~~~-------~~~~~~~R~~~i~~~i~~~~~DIi~LQEv~~~~-~~~~~~~~~~~~~~~~~~-~---- 67 (257)
T 3l1w_A 1 MKIATYNVRVDTEYD-------QDWQWSFRKEAVCQLINFHDWSLCCIQEVRPNQ-VRDLKAYTTFTCLSAERE-G---- 67 (257)
T ss_dssp CEEEEEECCCCCGGG-------GGGSHHHHHHHHHHHHHHHCCSEEEEEEECHHH-HHHHHHHSSSEEEEEESS-S----
T ss_pred CEEEEEECCCCCCCC-------CCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHH-HHHHHHHHCCCCEEEECC-C----
T ss_conf 989999678277887-------545899999999999987499999997887799-999875114540244025-7----
Q ss_pred CCCCCCCEEEEEEECCCEEEEEEECCCCCC-----CCCCCCCCCCEE--EEEEEEECCEEEEEEEECCCCCCCCCCCHHH
Q ss_conf 223446315899825852676530122467-----655555565336--9999982994999999406788877520000
Q gi|254781003|r 104 RDSNNDIHTAIAVRKKNVRVLQQSYPLLGA-----KDSFSRAGNRRA--VELLVEINGKKIWVLDIHLKSFCFLDSLENT 176 (304)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~r~~--~~~~~~~~~~~~~v~n~Hl~~~~~~~~~~~~ 176 (304)
.......++.+................. .........+.. ..+.....+..+.++++|++.....
T Consensus 68 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~------ 139 (257)
T 3l1w_A 68 --DGQGEGLAILYNEQKVQAIDTGYFWLSETPQQPSIHPEAGCPRIALWGLFKETTQNTPFLVINVHLDHISAH------ 139 (257)
T ss_dssp --SSCSCEEEEEECTTTEEEEEEEEEESSSSTTSSCCCTTCSSCCEEEEEEEEETTCSSCEEEEEEECCSSCHH------
T ss_pred --CCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCHH------
T ss_conf --777615789972676640442122046674302124544333135788888527883168874266766316------
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCC--CCCCCCCCCCCCCCCCCC
Q ss_conf 257789999999999999863036898099980268887766204689875225575311--144567876564668882
Q gi|254781003|r 177 YSPSCSLLSQQAQWLKDWITQKKESLVPFVIAGDFNRKINYLGNNDDFWKTIDPNDSLIR--FPKEKDSRCNANKNLRNK 254 (304)
Q Consensus 177 ~~~~~~~~~~q~~~l~~~~~~~~~~~~~vIi~GDfN~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 254 (304)
.+..|+..+...... ...+.|+|++||||..+....... ............. ....+.............
T Consensus 140 ------~~~~~~~~~~~~~~~-~~~~~~~iv~GDfN~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (257)
T 3l1w_A 140 ------ARLAGMTVILEELHD-KIAQYPTLLMGDFNAESGEEVHQL-VQKKFQDSKNLATHYGPRGTFQNFTYTKPWAEL 211 (257)
T ss_dssp ------HHHHHHHHHHHHTHH-HHHHSCEEEEEECCCCTTSHHHHH-HTTTCEEGGGTSEEESCSCCBCTTCTTCCGGGC
T ss_pred ------HHHHHHHHHHHHHHH-CCCCCCEEEECCCCCCCCHHHHHH-HHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf ------799999998889985-477897688345688743058999-873250445520556886642565566777889
Q ss_pred CCEEEEEECCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 01479998620431002472178641134554445555763438999849
Q gi|254781003|r 255 IPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRGKRLSDHCPISIDYDF 304 (304)
Q Consensus 255 ~~iD~I~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~~~l~f 304 (304)
.||||||+++.... . .........+..+|||+||+++|+|
T Consensus 212 ~rID~i~~s~~~~~-----~-----~~~~~~~~~~~~~SDH~PV~a~~~~ 251 (257)
T 3l1w_A 212 EEIDYIYVKGWQVQ-----Q-----TASLTDSIDGRFPSDHFPLEAEVAG 251 (257)
T ss_dssp BCCEEEEEESEEEE-----E-----EEECCCCBTTBCSSSBCCEEEEEEE
T ss_pred CEEEEEEEECCEEE-----E-----EEEECCCCCCCCCCCCCCEEEEEEE
T ss_conf 40789998388357-----9-----9994887689987854168999993