HHSEARCH alignment of GI: 254781003 and SCOP domain: d2ddra1

Alignment
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
Probab=100.00  E-value=2.5e-33  Score=197.66  Aligned_cols=273  Identities=15%  Similarity=0.090  Sum_probs=142.2

Q ss_pred             CCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHCCC--CCEEEEECC--
Q ss_conf             8826999983014788667666776531018899999999986089889999507857999860333--430786214--
Q gi|254781003|r   21 AQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEMGSYNAVAKVFPKN--TWCIFYSTE--   96 (304)
Q Consensus        21 ~~~lrV~twNi~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~DIi~lQEv~~~~~~~~~~~~~--~~~~~~~~~--   96 (304)
                      .++||||||||++|....      .+......+.+.|++.+...+|||||||||.+......+....  .|.......  
T Consensus         1 ~~tl~v~s~Nv~~~~~~~------~~~~~~~~r~~~i~~~i~~~~~DIi~LQEv~~~~~~~~~~~~l~~~~~~~~~~~~~   74 (299)
T d2ddra1           1 NDTLKVMTHNVYMLSTNL------YPNWGQTERADLIGAADYIKNQDVVILNEVFDNSASDRLLGNLKKEYPNQTAVLGR   74 (299)
T ss_dssp             CCEEEEEEEEEEECCTTT------CTTSCHHHHHHHHHHCSTTCSCSEEEEEEECCHHHHHHHHHHHTTTCCEECCCTTS
T ss_pred             CCCEEEEEEECCCCCCCC------CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCC
T ss_conf             996699987788465466------88727889999999998756998899992677652788888888756740332134


Q ss_pred             CCCCC-----CCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCCCCC
Q ss_conf             55675-----4322344631589982585267653012246765555556533699999829949999994067888775
Q gi|254781003|r   97 RLINH-----SKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAKDSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLD  171 (304)
Q Consensus        97 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~v~n~Hl~~~~~~~  171 (304)
                      .....     ...........|+++.++.+............ ........+.++.+....++..++++|+|++++....
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~~  153 (299)
T d2ddra1          75 SSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEKIQYVFAKG-CGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQAEDSMC  153 (299)
T ss_dssp             CCSTTSSEEEESCCTTCSSCCCCEEEESSCEEEEEEEECSCC-C----CCCCEEEEEEEEETTEEEEEEEEECCCC----
T ss_pred             CCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCEEEEEECC-CCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCC
T ss_conf             555555402301234310264169999861113134553113-5755434206999998069808999972466787753


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCCEEEEECCCCCCCCCCHHH-----HHHHHHCCCCCCCCCCCCCC---
Q ss_conf             20000257789999999999999863-0368980999802688877662046-----89875225575311144567---
Q gi|254781003|r  172 SLENTYSPSCSLLSQQAQWLKDWITQ-KKESLVPFVIAGDFNRKINYLGNND-----DFWKTIDPNDSLIRFPKEKD---  242 (304)
Q Consensus       172 ~~~~~~~~~~~~~~~q~~~l~~~~~~-~~~~~~~vIi~GDfN~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~---  242 (304)
                      ..    ......+..|++.+...+.. ....+.|+|+|||||..+.......     .....+............+.   
T Consensus       154 ~~----~~~~~~r~~q~~~~~~~~~~~~~~~~~~vi~~GDfN~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~  229 (299)
T d2ddra1         154 GK----TSPASVRTNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAENNNDSEYASMFKTLNASVPSYTGHTATWDAT  229 (299)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHTCCTTSCEEEEEECCCCCTTTSSCTTSHHHHHHHHHTBCCCEEEECSCSBCTT
T ss_pred             CH----HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf             10----24688999999987656554202566517997237888651444010456666643200122225776543433


Q ss_pred             CC--CCCCCCCCCCCCEEEEEECCCHHHCCCCCCEEEEE------ECCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             87--65646688820147999862043100247217864------1134554445555763438999849
Q gi|254781003|r  243 SR--CNANKNLRNKIPIDYFVMDQNAYKFLIQESFSEIL------YNEDDIKSRGKRLSDHCPISIDYDF  304 (304)
Q Consensus       243 ~~--~~~~~~~~~~~~iD~I~~s~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~SDH~PV~~~l~f  304 (304)
                      ..  ...........||||||++++..............      ............+|||+||+++|+.
T Consensus       230 ~~~~~~~~~~~~~~~riDyI~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SDH~PV~a~l~L  299 (299)
T d2ddra1         230 TNSIAKYNFPDSPAEYLDYIIASKDHANPSYIENKVLQPKSPQWTVTSWFQKYTYNDYSDHYPVEATISM  299 (299)
T ss_dssp             TCHHHHHHCTTSCCBCCEEEEEBTTSCCCSEEEEEECCCCCCCEEEEETTEEEEECCSCSSCCEEEEEEC
T ss_pred             CCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
T ss_conf             3444454568899842568995551048632424785024332200122257788995862228999989


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Bacillus cereus [TaxId: 1396]