PSIBLAST alignment of GI: 254781003 and protein with PDB id: 1bix
>gi|157830335|pdb|1BIX|A Chain A, The Crystal Structure Of The Human Dna Repair Endonuclease Hap1 Suggests The Recognition Of Extra-Helical Deoxyribose At Dna Abasic Sites Length = 287
Score = 81.1 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/311 (11%), Positives = 75/311 (24%), Gaps = 74/311 (23%)
Query: 15 PCTASVAQKVRLVSWNINTLSEQEGVSLWKNSVKRTTSDYTLLRQYAKNLDADIVFLQEM 74
+ +++ SWN++ L + K DI+ LQE
Sbjct: 22 TSPSGKPATLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQET 66
Query: 75 GSYNAVAKVFPKNTWCIFYSTERLINHSKRDSNNDIHTAIAVRKKNVRVLQQSYPLLGAK 134
K+ + S + S+ + ++ + + + + G
Sbjct: 67 KCSE--NKLPAELQELPGLSHQYWSAP----SDKEGYSGVGLLSRQCPLKVS----YGIG 116
Query: 135 DSFSRAGNRRAVELLVEINGKKIWVLDIHLKSFCFLDSLENTYSPSCSLLSQQAQWLKDW 194
D R V ++ ++ + + + L
Sbjct: 117 DEEHDQEGRVIVA-----EFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLA-- 169
Query: 195 ITQKKESLVPFVIAGDFNRKINYLGNNDD----------------FWKTIDPNDSLIRFP 238
S P V+ GD N + + F + + F
Sbjct: 170 ------SRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFGELLQAVPLADSFR 223
Query: 239 KEKDSRCNANKNLRN---------KIPIDYFVMDQNAYKFLIQESFSEILYNEDDIKSRG 289
+ A +DYF++ + L
Sbjct: 224 HLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIRSKAL--------- 274
Query: 290 KRLSDHCPISI 300
SDHCPI++
Sbjct: 275 --GSDHCPITL 283